Carassius auratus (goldfish): 113056224
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Entry
113056224 CDS
T07313
Symbol
pms2
Name
(RefSeq) mismatch repair endonuclease PMS2
KO
K10858
DNA mismatch repair protein PMS2
Organism
caua
Carassius auratus (goldfish)
Pathway
caua03430
Mismatch repair
caua03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
113056224 (pms2)
03460 Fanconi anemia pathway
113056224 (pms2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
caua03400
]
113056224 (pms2)
DNA repair and recombination proteins [BR:
caua03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
113056224 (pms2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutL_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
113056224
NCBI-ProteinID:
XP_026078611
Ensembl:
ENSCARG00000010121
UniProt:
A0A6P6L540
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Position
37:12392946..12399397
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AA seq
852 aa
AA seq
DB search
MSDSSTSSAGAIKAIDKQSVHQICSGQVVLTLATAVKELVENSIDAGATNVDVKLKDSGI
ELVEVTDNGKGVEEQNFEGLTLKHHTSKLRDFSDLIHVETFGFRGEALSSLCALSDLSVV
TCHESAQIGARLVYDHDGHLTQRVPHPRQHGTTVILQKLFSTLPVRHKEFQRNIKKEYSK
MIFILQSYCIISTGVRITCTNQTGQGKRTTVLCTSGSNSMRDNIGAVFGPKQLQSLIPFQ
QISPGESIKEDYGLGEVDVPKDLFFIDGFVSQADHGVGRSATDRQFFFINKRPCDPVKAS
KLVNEVYHMYNRHQYPFVALNITVASDCVDVNVTPDKRQILLQEEKLLLAILKSSLMAMF
ETGVNKISLNHITPALTNLCRPTETSAGSEDREIGSVSEALPDDDPPKTSINLARLKEAF
SNHQVPGVGSKQSSHKAACSGPSQKKMFSFVSCSKKMTDIMRPPLKSSPSLTAVSSIKKS
VCLAKYKSTFNNDAEDSEAANHISAEDDPEILQENNSESGLHPCIYENDVKAETIHEPVD
EKYWSYKPLVPETKSEQHQDRISSPEAKRARYEAEPLAQNCLVDSKNKNTSTQFDSPVSI
QKNAVLLQFSLQELSKRMQRLQAQKKENNDQELKYRRFRAKINPGENQSAEDELKKEISK
DMFKDMEIIGQFNLGFIITKLKTDLFIIDQHATDEKYNFEMLQKNTVLKGQRLIAPQSLH
LPAISETVLMENLEIFRKNGFDFLIDEDAQVMERVKLVSLPTSKNWTFGPSDIEELIFML
SDSPGIMCRPSRVRQMFASRACRKSVMVGTALNTSEMKKLVLHMGEIEQPWNCPHGRPTM
RHLANLDMVSQD
NT seq
2559 nt
NT seq
+upstream
nt +downstream
nt
atgtcagactcaagcacaagttctgcaggagccattaaggcaatagacaaacagtctgtg
catcagatctgctctggacaggtggtgctgactctggccacagctgtgaaggagctggtg
gagaacagcattgatgctggtgccactaatgtcgatgtcaagctaaaagacagcggaata
gagttagtggaggttaccgacaatggaaaaggtgttgaggagcaaaactttgagggacta
actttaaaacaccacacctctaaactaagagatttttccgacctgatacacgtggagacg
tttgggttccgtggagaagctctgagctcactttgtgctcttagtgatcttagtgttgtg
acctgccatgaaagcgctcagatcggagctcggctggtgtatgaccatgatggtcatctc
actcagcgtgtgccgcatccccgccaacatggcactactgtcattctgcagaaactcttc
tccacattacctgtccgacacaaggagttccagcgcaacatcaaaaaggaatattccaag
atgattttcatcctgcaatcctactgcatcatctccactggtgtgcgtataacatgcacc
aaccagacgggacaaggcaagcgcaccacagtactgtgcaccagtgggagtaacagcatg
agagacaacatcggagctgtgtttggacctaaacagctacaaagtttgattcccttccag
caaatatctcccggtgaatcaattaaagaagattatggtctcggggaggtagatgttcct
aaagacctttttttcattgacggctttgtgtcacaagcggatcatggtgtcggacgcagt
gctactgacagacagttcttctttatcaataaaagaccctgtgatccagtgaaggcatcc
aagcttgtgaatgaggtttatcacatgtacaatcgccatcaatacccttttgttgctcta
aacatcactgttgcttcagactgtgtcgacgtgaatgtgactccagacaaacgtcagatc
ctactacaagaggaaaagctcttgctggcaattctgaaaagctcactcatggctatgttt
gagactggtgtcaataaaatcagtctcaatcacatcactccagcacttacaaacttgtgt
agaccaaccgagacaagtgctggttcagaagatcgggaaataggttctgtctctgaagcg
cttccagatgatgacccaccgaagacttccatcaatctagctcgacttaaagaagcattt
tcaaaccatcaggttcctggagttggctcaaagcagtctagtcataaagctgcctgttct
ggtccttctcaaaagaagatgttttcctttgtgagctgctctaaaaaaatgacagacatt
atgaggccacctctaaagtcctctccaagtttgactgccgtttcctccataaaaaaatct
gtttgtctagctaaatataaaagcacctttaataatgatgctgaagattctgaggctgca
aaccacatttcagctgaagatgatccagagattttacaggaaaacaattcagagtcaggc
ttacacccttgtatttatgaaaatgatgttaaagctgagactatccatgaacctgtagat
gagaagtactggagttataaacctttggtgccagagaccaagtctgagcaacaccaggac
agaatttccagtcctgaagctaaaagagctcgatatgaagctgaacctctagcacaaaac
tgtttggtggactccaaaaacaagaatacttctacacagtttgattcaccggtcagcata
cagaagaacgcagtgcttttgcagttttctttgcaggaactttctaaaaggatgcaaagg
ctgcaggctcagaagaaagagaacaatgatcaagagctaaaatatagacggttcagggca
aagattaaccctggtgaaaaccagagtgctgaggacgagcttaagaaagaaataagtaaa
gacatgttcaaggatatggaaatcattggtcagttcaacctgggttttattatcaccaaa
ctgaaaactgaccttttcataattgaccagcatgccacggacgaaaagtacaattttgag
atgctacaaaagaatacggtcttaaagggacagcgactcatagctccacaaagtcttcac
ctcccagctatcagtgaaactgtgctcatggaaaaccttgaaatcttcagaaagaatggg
tttgacttcctcattgatgaggatgctcaggttatggaaagggtgaagctggtgtcttta
cctacaagcaagaattggacctttggcccaagtgacattgaggaactcatctttatgcta
agcgacagtcctggaatcatgtgtcgaccttctcgtgtgaggcagatgtttgcgtccagg
gcatgtcgcaaatcggtgatggttggcactgccctgaacaccagtgaaatgaagaaactt
gtgctgcacatgggcgaaattgaacagccctggaattgtccacatggtagacccaccatg
agacaccttgctaatctggatatggtttctcaggactaa
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