Carassius auratus (goldfish): 113056263
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Entry
113056263 CDS
T07313
Name
(RefSeq) probable E3 ubiquitin-protein ligase MGRN1 isoform X1
KO
K10604
E3 ubiquitin-protein ligase MGRN1 [EC:
2.3.2.27
]
Organism
caua
Carassius auratus (goldfish)
Pathway
caua04120
Ubiquitin mediated proteolysis
caua04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
113056263
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
113056263
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
caua04121
]
113056263
Enzymes [BR:
caua01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
113056263
Ubiquitin system [BR:
caua04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
113056263
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_3
zf-RING_2
Prok-RING_4
zf-C3HC4
zf-C3HC4_2
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
113056263
NCBI-ProteinID:
XP_026078680
Ensembl:
ENSCARG00000016538
UniProt:
A0A6P6L2E6
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All DBs
Position
37:complement(12942967..12952263)
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AA seq
548 aa
AA seq
DB search
MGSILSRRIAGVEDIDIQANSAYRYPPKTGNYFTSHFFMGGEKFNTPHPEGYLFGENMDL
NFLGNRPVQFPYVTPAPQEPVKTLRSLVNIRKDSLRLVKYKDDSDSTPEDTGDPRLLYSV
EFCFDTDARVAITLYCQAFEEFANGMAIYSPKSPSMVSETVHYKGGINQQFSLPSFKIDF
TKWKPEELNFDLDKGVFPLVVKAIVDDGDDVTGHAHVLLAAFERHVDGSFSVKPLKQKQI
VDRVSYLLQEIYGIENRNNQETKSTEDENSDNSSECVVCLSDLRDTLILPCRHLCLCNAC
ADTLRYQANNCPICRLPFRALLQIRAVRKKTAASLSPVSFSPVLSQSSDHTEHSNADNIP
PGYEPISLLEALNGVQPMSPSIPSAPLYEEIQFSGEMGDPLNLSAETTSMKGKGSKSPDG
STRSSSSPIQEEEDEEKMLELSDGQPRSVLPCSLSPTEATEGVSTKPGFPNSGSESRSLS
VSVSEILQDCHSERSSLSRTESDPSADLALPGSSESIESLRSQSTSSSSQPLLCLPSTLR
MEDERLTS
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgggttcaatactgagcaggaggattgctggagttgaagatatcgatattcaagccaac
tcggcgtacagatatcctcccaaaacaggaaattatttcaccagccattttttcatggga
ggagaaaagttcaacacgccccatcctgagggatatctctttggagaaaatatggatttg
aatttcctaggcaacagacctgtgcagtttccctacgtgaccccggcgccgcaggagcct
gtgaagacgctgaggagtttggtgaacatcaggaaggattcattacgacttgtcaagtat
aaggatgattctgacagcaccccggaggacacaggagatcctagactcctttacagtgtt
gaattctgctttgatactgatgccagagtggctattacattatactgtcaagcctttgag
gagtttgccaatgggatggcaatatacagccccaagagcccttcaatggtgtctgagacg
gtccattataagggagggataaatcagcaattttctctaccttccttcaagattgatttc
accaaatggaaacctgaagagctgaactttgatctggacaaaggcgttttccctttggtg
gtcaaagcaatagtggatgatggagatgatgtcaccgggcatgcacatgttctcttggct
gcttttgaaaggcatgttgatggcagtttctctgtgaaacctttgaaacagaagcagatc
gtggaccgcgtgagctatcttctgcaggagatttacggcattgaaaaccggaacaatcag
gagacaaagtccacggaggatgagaacagtgacaacagcagcgagtgtgtggtttgtttg
tcggacctgcgtgacacactcattctcccttgcaggcacctgtgtctgtgcaatgcctgt
gctgacacactgcgttaccaggccaacaactgcccaatctgcagactgccattcagagcc
ctgctccagattcgagccgtgaggaagaaaacagctgcctctctctcaccagtgtccttt
agcccagtgttgtcccagagctctgaccatactgagcattcgaatgcagacaacattccc
cctggctatgagcctatctcacttctggaagccctgaatggggtgcaacccatgtcccct
tcaatcccatctgcacctctctatgaggagatccagttttctggggagatgggggatcct
cttaacctgagtgcagaaaccacatcgatgaagggcaaaggtagcaagtcaccagatggg
tctacacgttcttcctcatcccccatacaggaggaggaagacgaggagaagatgttggag
ctctctgatggccagcctcggtctgttctgccctgtagtctcagtcccactgaggcaaca
gagggtgtgtccaccaaaccaggattcccaaattcaggttcagagagcagatcgctcagt
gtgtctgtgagtgaaatcctacaggactgccacagtgagcgcagcagcctgagccggaca
gaaagtgacccctcagcagacctggccctgcctgggtcatcggagtccatagaaagcctg
aggagtcagagcaccagcagctccagtcagcccctgctctgcctccccagcaccctgcgc
atggaggatgagcggctcacttcataa
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