Carassius auratus (goldfish): 113056289
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Entry
113056289 CDS
T07313
Symbol
heatr1
Name
(RefSeq) HEAT repeat-containing protein 1
KO
K14550
U3 small nucleolar RNA-associated protein 10
Organism
caua
Carassius auratus (goldfish)
Pathway
caua03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
113056289 (heatr1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
caua03009
]
113056289 (heatr1)
Ribosome biogenesis [BR:
caua03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
113056289 (heatr1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_HEATR1
BP28CT
U3snoRNP10
HEAT_EF3_N
Importin_rep_6
DUF4611
DUF4765
Vac14_Fab1_bd
Motif
Other DBs
NCBI-GeneID:
113056289
NCBI-ProteinID:
XP_026078718
Ensembl:
ENSCARG00000007191
UniProt:
A0A6P6L2B9
LinkDB
All DBs
Position
37:13830640..13857463
Genome browser
AA seq
2163 aa
AA seq
DB search
MTSLAHQLKRLALPQNDSNLLSRRVVASVLFDPKDAASMDRSTFYALGCTGLEELMGIDP
AFNEFQETLFSQASLTLERSVQSKEVNKKLDKSISLFLTRLSPYFLLKPALKCIEWLIHR
FHIQLYNQDSLIACVLPYHETKVFVRVIQLLNIEDPTHKWHWLHGLQKPGVPLARGTLLT
HCYKDLGFMDFICSMVTDSVKAYSGFVRDGNCPQLRVVFSFYASTIVSALDAVEKITNSI
IAKLLPFVQLGLKSNLLDYVAATYMIVCQMAVKVVMEAQLVDSLTVQLCKSLRRMPQLSR
EALSCIIILLQNQKEGIVGPKAFGYLCAIPSLVSTLQSIATVHDISPLLRYLLPHLIHSV
MTQDDEQQNESLSDRTGLLQAVFQDLPLSGNLESTAAKLLLEEYVSCSTELPSDRISALN
QRIQSTVRQFESRYPCALDVALENHVKKISSDREKTLLHQFISLTMSCGKYQILPDSDTS
LMLSLNHPLPSVRNMAVDYLKEILTSEHNGFDEAFLKDALLERIKDDMPEIVLSALKALQ
LHMDLMDAEETVSRLISLLHRIKPSAEWCSVLKEAVGVLDDPRIIEGNPDLKAQIIWEIL
PFLVLTSAAPKCVELQMASYVAETTLLSQHPLTHGWAKVLKDVLVKTSPSDVLGVVNQML
TTTLIKNLANMDHATKLDTLQNVCDIVSRQGSSVRERAAFVVFSNALLQSLPSMTESQHL
HTAQSVYKLLEPLLLQVYTIQPEQASCEEVNECLPVCVILGEFLQKMSAGLSAEREQGLL
LLSLLRLFITALKCPDSTFKDEPWWNPEKMDANTCVYVRLLCRLFDVVISGASQGPLAPC
FKSLMQPLLQVHLNEPTTLFKFLSLLWGYNSNLGDQLDCQVSAILQTQALYVGKALLCNQ
PIKTRNVLASGSSPVVPSLLVCLCSGVGEVRRAAIAVLHSLSGVVSSPYSLLVENLLKSS
EEIIADPSYLSQALSKIYEEALLLKDKKKKLASIEQLLQCVRLPCCPAYTCKTLLRALQD
VHGEPILAILLPAVERLLEQCASDSCTFLPDEAHLLQLLLSKFSEASAPLLVKDPRCLEV
FIRALGTSAKPYPSMPGFQIIALEQITKPFFTALGDEKIQQKILSVLFDLLVGNKNPACA
QAINSVFKAIAVDAELVANELMPVDKQKVTVTVQQARRSKMQTRKTQESSRAVPEENVVS
WPRVTLILELLQHKKKLRRAQCLVPALFNLLSRCLEPAAAEQENLEYTKQLILSCLLNVC
QKLSPEGGPISKDVLEEDKLNVELVVQCVRMSDTPQTHHHALLLLGALAGIFPEKVLHNI
MPIFTFMGSNIMRLDDTYSFQVINKTVQAVIPALIKANEGGSAQSEGNMETVVSHIVHVF
VDALPHVPEHRRLPILSQLMNTLGPSRFLWVLMLLLFKQHVTQTSVSATGAEKEAVVERD
QDFWISVCCEFEVKEQLTSIIRILQYLMTLPQDKEEAPEKKKTRGRSAVKKEETVSDVIF
NVETTSGKDLRHFKFLSISFMAQLLASDRFVGKVADCEDITESTLQTLQQNLLEEVLRYI
HTVARCVEDNADKPTAKFWRALLSKSYDILDKVNALLPMDSFIMVMRGLMGNQLASVRRK
AMELLNNKLQQRTQWVEEQITVLLELIGVLLKIVGRSHGQVTAQEEEELAINRQTALYSL
KLLCRNFGAGHQEPFVPVLKKAVELVADKDEEKNVMGSALLCVAEVTSTLKALAIPQLHS
LMPAVLDTLKERKDLLNNEIYLLSAVTALQRVSETLPHFISPYLEDTISQVARLTLLAKR
LTSCPQLSVRLSSLSTTLATKVPPRVLIPTITKCYCAMVDVQQNRLGPLMIILKEHITHM
EKDQLNNHQSELTSFFLSALDFRSQHCQGDLKKTGEIEGYVIDCLLVMIMKLSEVTFRPL
FFKLFDWSKMDGASRNRLLTFYRLADNIANKLKGLFVLFAGQLVKPISELLRQLNISHTD
KPFFDSDDDDEEEEDSDDDDEDNVSKSSLLLQHVLDCLHKIFLYDTQRFLSKERADALLG
PLVDQLENMLGGDEIYKSHITKHLVPCVAQFAVAMGDDSQWKVLNYQILLKTRHSSPKVR
FSALVMLLELASKLRENYMVLLPETIPFLAELMEDECEEVEQQVQKVIHEMETILGEPLQ
SYF
NT seq
6492 nt
NT seq
+upstream
nt +downstream
nt
atgacatcattagcacatcagttgaagcggctggctctgccacagaatgactccaatctg
ctcagccggagagtggtggcctctgtgctctttgaccctaaagatgctgccagcatggac
cgcagcaccttctatgccctgggctgcacaggacttgaagagctgatgggtattgatcca
gcattcaatgagtttcaggagactctgtttagtcaagcctctttgactttagagcgcagc
gttcagagcaaagaggtgaacaagaaactggacaagagcatctcactctttctcactcga
ctgtcaccttactttctgctcaagcccgctctgaaatgcattgaatggctaatacacaga
ttccacattcagctgtacaaccaggacagcctgattgcttgtgttttaccgtatcatgag
actaaagtgtttgtacgagtgatccagcttttaaatattgaagatccaacccacaaatgg
cactggctgcatggattacagaaacctggtgttcccctggctcgaggaactctgctcaca
cactgctataaggatttaggcttcatggatttcatttgttctatggtcacagattcagta
aaggcatactctggattcgtcagggatgggaactgtccgcagctgcgtgtggttttctct
ttctatgcgtccaccattgtttctgcacttgatgcagtggagaagataacaaactctatt
attgccaaactgcttccatttgtacaactgggactgaaatctaaccttttagactacgtg
gctgccacttacatgattgtgtgtcagatggcagtgaaggtagtgatggaggctcagctg
gttgactctctgaccgtgcagttgtgcaagtctctacgccgaatgcctcagttatccaga
gaggctttgagctgcattatcatcctcctgcagaaccagaaagaaggaattgttggtcca
aaggcatttggatacctgtgtgctatcccctccctggtgtccactctccagagtatagca
acagttcatgacatcagtcccctgctgcgttatctgctgcctcatctcatacactctgtg
atgacccaggatgatgagcagcagaatgaaagtttgtcagaccgtactggactattacag
gcagtgtttcaggatcttccactgtctggcaacctggagagcactgcagccaagctgctt
cttgaggagtatgtttcctgcagcaccgagcttccctcagataggatttcagctcttaat
caaagaattcaatctactgttcgccagtttgaatccaggtatccatgtgcactggatgtg
gcactggaaaatcatgtcaaaaaaatttcatccgaccgtgaaaaaactctgcttcatcag
ttcatctccttaacaatgagctgtggaaaatatcaaatcctgccagattcagacacctct
ctgatgctcagtctcaatcatccactaccttctgtgagaaatatggctgtagactacctg
aaggagatcctcacctcagaacacaatggctttgatgaggcgtttctgaaggatgcattg
ctggagagaataaaggacgatatgccagagattgtgctctctgcccttaaagcattgcag
cttcacatggatcttatggatgcagaggagactgtttcccgtttgatttcacttcttcat
cgcatcaaaccgtcagcggaatggtgttcggtgctaaaagaggctgtgggggttcttgat
gacccgcgtattattgagggtaacccagatcttaaggctcagattatttgggagattctg
cccttcctggtgttgacgagcgctgcgccaaagtgtgtggagttgcaaatggcatcttat
gtggctgaaacgactttgctttcccagcatcccctaactcatggttgggcgaaagtgctg
aaggatgttctggtcaaaacctctccatcagatgtgctgggtgtagtcaaccaaatgctt
acaacgactctgatcaagaacttggccaatatggatcatgcaaccaaactcgacactctg
cagaatgtgtgtgatatcgtgagccgtcagggcagcagcgtgcgggagagagcagcgttt
gtggtgttcagtaatgcactgctgcagagtcttccgtccatgacggagagtcaacacctc
cacactgcacagagtgtgtacaaactgctggagcctttactgctacaggtctacacgatt
caacccgaacaggcttcttgtgaggaggtgaatgagtgtctgccagtctgtgtgatattg
ggtgagtttctgcagaagatgagcgctggtctcagtgcagagagagaacaaggcctcctc
ctgctgtcactcctgcggcttttcatcacggcactcaagtgtccagattccacatttaaa
gatgagccatggtggaacccagagaaaatggacgccaatacctgcgtttatgtgcgtctc
ctgtgtcgtctgtttgacgtagtgatatcaggggccagccaagggcctttggccccctgc
ttcaagagcctaatgcagcctctgttacaggttcacctgaatgagccaacgaccctcttt
aagttcctctctcttttatggggctacaacagtaatttgggtgatcagttggactgtcaa
gttagtgccatactgcaaacgcaggctctttatgtgggaaaggctttgctttgcaatcag
ccaataaaaacccgcaacgtgctggcatcaggttcctcaccagtggtgccgtccttgctg
gtgtgtttgtgttcaggcgtgggtgaagttcggagagctgccattgctgtgctccattct
ctttcaggggttgtttcttccccttattctctactagtggagaaccttctcaaatcatca
gaggagatcatcgctgacccctcttacctcagccaggcgctgtccaagatatatgaggag
gcactgttattgaaagataaaaagaaaaagctggcatcgattgagcagcttctgcagtgt
gtgcggttaccttgctgccctgcctacacctgtaaaacactgctgcgagcgcttcaggat
gttcatggagagcctattttggccattcttctacctgctgtggagcgacttctcgagcaa
tgtgcttcagactcctgcaccttcctgccagatgaagcccacctcctgcagctcctgctg
agcaagttcagtgaggcttctgcacctcttctggtcaaagaccctcgatgcctggaggtc
tttattagggcattgggcacctcagccaagccgtacccttctatgcctggtttccagatt
attgccctggagcagatcaccaagccattcttcactgctcttggagatgaaaagattcaa
cagaaaattctttctgttttatttgacttgctggtggggaacaaaaaccctgcctgcgcc
caagctatcaacagtgtctttaaagcgattgcggtggatgcggagctagtggccaatgag
ctgatgcctgtagataaacaaaaagttactgtaacagttcaacaagcacgcaggagtaaa
atgcaaactagaaaaacacaagaatcctcccgggcagtgcccgaggagaatgttgtctct
tggccaagagttaccctgattttagaacttctccaacacaagaaaaagctaaggagagcc
cagtgtcttgtgcccgctctgtttaatctgctgtcaagatgtctggagcccgccgcagct
gaacaggagaatctggagtacacaaaacagctcatcctcagctgcctgctgaacgtgtgt
cagaaactgtctcccgaaggagggcctataagcaaagatgtgctggaggaggataaatta
aatgtggagctggtagtgcagtgtgtcaggatgtcagacacaccccagactcaccatcat
gctctccttttgctcggtgctttggcgggtatctttcctgagaaggttcttcacaacatc
atgcccatcttcacattcatgggttctaacatcatgcgactggatgacacttacagcttc
caggtcatcaacaagactgttcaggcagtcatccctgctcttataaaggccaatgagggt
ggaagtgcccagtctgaggggaatatggagactgtggtctcacatatcgtgcatgtgttt
gttgatgccctgcctcatgtgcccgagcacagacgcttacccatcctcagccagctgatg
aacacgctggggccgtctcgcttcctctgggtcctgatgctgctcctgttcaagcagcat
gtcacacaaacatctgtcagtgcaactggggctgaaaaggaggctgttgtggagagagat
caggacttctggatctcggtgtgctgtgagtttgaggtaaaggagcagctgacctccatc
atcaggatcctgcagtatctcatgactctaccacaggacaaagaagaagctccggagaaa
aagaagacacgtggaagaagtgcagtgaagaaggaagaaacagtctcagatgtgatcttc
aacgtggagactactagtggcaaggacctccgccattttaaattcctctccatctctttt
atggctcagcttttggcctctgacagatttgttgggaaggtggctgactgtgaggacata
acagaaagcaccttacagactcttcagcagaatctgctggaggaggttctgcgctacatc
catacggttgctcgctgtgtagaggataatgcagacaaacccacggctaagttctggaga
gctctgctcagcaagtcctatgacatcctggacaaggtcaatgccttgctgcccatggat
tccttcatcatggtaatgagaggcctgatgggtaatcagttagcttcagttagaaggaag
gccatggagttactcaataacaaactacagcaacggacgcagtgggtggaagaacagatt
actgtgcttctggagctcattggcgtcctcctaaaaattgtgggtcggagccacggacag
gtcacggcgcaggaagaagaggagctggctatcaatcgacagacggccctttacagcctt
aaacttctgtgccgaaattttggcgcaggccaccaggagccatttgtaccagtgctgaaa
aaagcggtggagctggttgctgataaagacgaggaaaagaacgtgatgggaagtgctctg
ctgtgtgtggctgaagtgaccagcacactgaaagccctcgctataccacagttacacagc
ctgatgcctgcagtgctggacactctgaaggagagaaaggacctgctgaacaatgaaatc
tacttgctgagtgcggtcacagctctacagcgcgtttcagagacgttaccgcacttcatc
agcccttacctggaggacaccatctcacaggtcgcccgcttaactctgttagccaagcga
ctgacatcctgccctcagctgtctgtacgtctctcctcgctcagcaccactcttgccaca
aaggtgcctcccagggtcctcattcccaccattacaaaatgctattgcgccatggtggat
gttcagcagaaccgtcttggtcctctgatgatcatcctgaaggaacacataactcacatg
gaaaaggaccaactcaacaaccaccaatcagagctcacttccttcttcctgtctgctctt
gatttccgttcccagcattgccagggagatctgaagaagactggtgagatcgagggctat
gtgattgactgtctgttagtgatgattatgaaactttcagaagtcactttcagacctctc
ttcttcaagttatttgactggtcaaagatggatggtgcttctagaaaccgcctgctgacg
ttctatagacttgcagacaacatcgccaacaaactgaaaggactgtttgtgttgtttgct
gggcagctggtcaaacccatctctgaactgctgcgacagctcaacatttcccacacagac
aaacccttcttcgattcagatgatgatgatgaggaggaggaggattcagatgatgatgat
gaagataatgtgtcaaagagcagccttctgctgcagcatgtgttggactgcctccataaa
atcttcctctatgatactcagcgcttcctcagtaaggagagggctgacgctctcctgggc
cccctggtggatcagttggagaacatgctgggaggtgacgaaatctacaagagccacatc
accaagcatttggtgccctgtgttgcccagtttgctgtggccatgggagatgactcccag
tggaaagttctcaattatcagattctgctcaagacacggcacagttctcctaaggtgcgt
ttctctgcacttgtcatgctgctggagttggctagcaagctgagggagaactacatggtt
cttctgccagagactatcccatttctggctgagcttatggaggatgaatgtgaggaagtg
gagcagcaggtgcagaaggtcattcatgaaatggagactatcctcggtgaaccgctgcaa
agctacttttaa
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integrated database retrieval system