Carassius auratus (goldfish): 113056407
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Entry
113056407 CDS
T07313
Name
(RefSeq) integrin alpha-M-like
KO
K06461
integrin alpha M
Organism
caua
Carassius auratus (goldfish)
Pathway
caua04145
Phagosome
caua04514
Cell adhesion molecule (CAM) interaction
caua04517
IgSF CAM signaling
caua04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
113056407
04517 IgSF CAM signaling
113056407
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
113056407
09142 Cell motility
04810 Regulation of actin cytoskeleton
113056407
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
caua04131
]
113056407
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
caua04147
]
113056407
04515 Cell adhesion molecules [BR:
caua04515
]
113056407
04090 CD molecules [BR:
caua04090
]
113056407
00536 Glycosaminoglycan binding proteins [BR:
caua00536
]
113056407
Membrane trafficking [BR:
caua04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
113056407
Exosome [BR:
caua04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
113056407
Cell adhesion molecules [BR:
caua04515
]
Integrins
Integrin alpha subunits
113056407
CD molecules [BR:
caua04090
]
Proteins
113056407
Glycosaminoglycan binding proteins [BR:
caua00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
113056407
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
ITGAX-like_Ig_3
FG-GAP
Integrin_A_Ig_2
VWA_2
FG-GAP_3
Integrin_A_Ig_1
Motif
Other DBs
NCBI-GeneID:
113056407
NCBI-ProteinID:
XP_026078963
Ensembl:
ENSCARG00000007381
UniProt:
A0A6P6L338
LinkDB
All DBs
Position
37:complement(17076292..17117612)
Genome browser
AA seq
1128 aa
AA seq
DB search
MDQNFRLLLCLFYVCHSLTAFNIDPVTWKTFTNNEKTGFGYKVIQKGESLLVSDPLIQRS
QTQRGQIYDCSVTSGNCVPLAITVPVEAVNMSLGLSMSLDPQSSRAVVCGPTIPKNCDVT
TYNGMCFKISSENVVSRSVPRTLRECPKSQIDIAFLMDGSGSVNYADFMKMKAFVIEMIK
SFIDHDTKFAIAQFSTNCYIHYKFKQSFKNAKQWEDEVRTISQNKGWTNTAKAIEQLVRE
LFVSEEGARPSASKILVVITDGESTDKFLTEAVKKAQAKNITRYAIGVGNAFDIDTATRE
LAIIASLPTSKHVFKVTDFDALESIRGQLKENIIAIEGTQTSGDSSRMEFSQDGFSAAFT
SNTDLIMTAVGAFQWKGGYQLHKQNDRLNVFQAGSEHDSYLGYSLAIATTFGAKYAVMGA
PRYKHRGQITVSRIDNIQSNLKELDPPKPQIGSYFGAEVCVVDLNSDSRTDLLLVSAPTY
MEPDREGKVFVYTFTRRSYFDFSGMVLVGMAGQRGRFGSSLASPADLNNDGYMDVLIGAP
LEEDGQGSIYIFNGGVDQINSAYSQRITGSSLQQGLRFFGISLSQSSPDQTQDSLPDIAV
GSMGAVLLLRSRPIMNLEISVHYNPSKIPTGETDLSIKNTIKMCFTMSPYKHSIRGLTAN
INYTIMLDAKRQKYRAYFSPKNRILNNDMNISTYDETCKSHPFLIDAFSEDALIPLSNQL
TFTFEGLPSAKLQDIRPVLLPGIKTTTDHNVDFEINCGHDDICVDDLRMDFSFSGSTNIE
VGIMQEIDVVVFVENRGENSYNTLFTLNYPFGLSYRRITSKQGRVECVSLDSEQKGTFGE
TTCHISKPILKGNAQAVFHITYSIDKESTFDQKVRFTARINSGNDKHSQTSELSKEKSIG
VKYAIYISLIRHEDSTLHINFTAQKNGTDKPVQQILKIENDFRELRFKVLIKVPVMLGDK
SIWTDKNIQIPGCVKQRDKQPVVTDFVEEIKKDRVVNCSVAVCAEFSCDVTLIKHERMLY
NITGNVSSGWIEQTGLGAGVFQLVSSASMDYDKSKYVLFSSDSQQTVPSVQINTQVEVYE
EVNLTKEITGGIIAGLLLLALITTALYKAGFFKSHYKELLENAEESPD
NT seq
3387 nt
NT seq
+upstream
nt +downstream
nt
atggaccagaatttcaggttgcttttgtgtttgttttatgtatgccattcattaacggcc
ttcaacattgatcctgtgacatggaagaccttcacaaacaatgaaaaaactggctttggc
tataaagtgatacaaaaaggtgaaagtctgctagtgagcgatcctttaatacaacggagt
caaactcaaagaggacaaatttatgactgttctgtcaccagtggaaactgcgtgccactg
gccattactgtcccagttgaagctgtcaacatgtcccttggactttcaatgtctctagat
cctcagtcttcaagagcagtggtttgtggtccaaccatacctaagaactgtgacgtaaca
acatacaacggcatgtgctttaaaatcagttcagaaaatgttgtgagcagatctgtgcct
aggactctgagagaatgcccaaagtcacaaattgacattgcttttttaatggatggatct
ggaagtgtaaattatgcagattttatgaagatgaaggcttttgttatagaaatgatcaaa
agttttatagaccatgatacaaagtttgccattgcacagttttctacaaattgttacatt
cattacaagtttaaacaaagtttcaaaaacgccaagcagtgggaagatgaagtgagaacg
atatctcaaaataagggatggactaacacagcaaaagctatagaacaacttgtgagggag
ctatttgtaagtgaagaaggtgcaagaccatcagccagtaaaattctggttgttatcaca
gatggtgaatcaactgataaattcttgactgaagccgtcaaaaaagcacaagcaaaaaat
ataacacgatatgctattggggttggcaatgcttttgatattgacacagccacaagggag
ctggcaattatcgcatctttacccaccagtaagcatgtttttaaagtaactgacttcgac
gcactggaaagtattcgtggacaactcaaagagaacattattgcaattgaaggaacccag
acctccggtgattcatcccggatggagttttcacaggatggttttagtgcagcatttaca
tcaaatacagatctaataatgactgcagtgggagctttccagtggaaaggtggatatcag
ctgcacaaacagaatgatcggttaaatgtctttcaagctggaagtgagcatgacagttat
ttaggttattccttggcaatagcaacaacatttggagcaaagtatgcagtcatgggagca
ccaagatacaagcataggggacaaataactgtttcaagaattgataatattcaaagcaat
ttaaaggaactggatccccctaagcctcagattggctcatattttggagctgaggtttgt
gtggtggatttgaacagtgactccagaacagacctcctgttggtatcggcaccaacatac
atggagcctgaccgggagggcaaagtgtttgtttacaccttcactcgccggtcttacttt
gatttttcggggatggtgctggtgggaatggcaggtcagaggggtcgttttggttcttct
ctggccagtccagcagatctaaataatgatggttatatggatgtgctgattggagctcct
ttagaggaggatggacagggcagcatctacatcttcaatggaggagtagatcagattaat
tctgcctattcacagaggattactggatcctctttgcaacaaggtttgcggttctttggg
atttcactaagtcagtcctctccagaccagactcaagacagccttcctgatattgctgta
gggtccatgggagcagttctgcttctcaggtccagacccattatgaatttggaaatcagc
gtacattacaacccatccaaaataccaaccggtgaaacagacctgtcgattaaaaatacc
atcaaaatgtgcttcactatgagtccatataagcacagcataagaggcctaacagcaaat
attaattacaccataatgctggatgccaagcgacagaaatatcgagcatatttctcaccc
aaaaaccgcatcctcaataatgatatgaatattagtacttatgacgaaacttgtaaaagt
catcctttccttatagacgctttctcagaagatgctctgatcccattgtctaatcagtta
acattcacatttgagggcctaccatctgccaaactgcaagacataaggccagtactgctg
ccggggataaagaccaccacagaccacaatgtggattttgagataaattgtggacatgat
gacatttgtgttgatgacctcaggatggattttagtttctctggttctacaaatatagag
gttgggatcatgcaggaaatcgatgtggtagtgtttgtagagaacagaggagaaaactca
tacaacacactcttcaccctcaactacccctttggactttcctacaggagaatcacatct
aaacagggcagagtggagtgtgtatctcttgacagtgagcaaaaaggtacatttggagag
accacttgccacataagcaaacccatcctcaagggcaacgctcaggctgtgtttcatatt
acatacagcatcgataaagaaagcaccttcgatcaaaaggtcagatttactgctagaatc
aacagtgggaatgacaaacactctcaaaccagtgaattatccaaagagaaaagcattggt
gtcaaatatgccatctatatttccttaataagacatgaagattcaaccctccacattaat
tttactgcacagaaaaatggtactgataaaccagtccaacagatactaaagattgaaaat
gactttagagaactaagatttaaagttctcatcaaagttccagtgatgttgggagataaa
tctatctggactgataaaaacatacagattccaggctgtgtgaaacagagggataagcaa
ccagtagtaactgattttgtcgaagaaattaaaaaggatcgtgtggtgaactgctctgtg
gcagtgtgtgccgagttcagctgtgacgtcactctcataaagcatgaaaggatgctctat
aatattactggcaatgtgagctctggatggattgagcagactggactcggagctggtgtt
tttcagctggtcagttcagcatctatggattatgacaagagcaaatatgttttattttcc
tctgattctcaacaaactgtaccatctgttcagattaatactcaagtggaggtgtatgag
gaggtgaatctgactaaagagatcacgggaggaataatagcaggattgctgctactggct
ctcatcacaacggctctctataaggctggttttttcaaaagccattacaaggagctgcta
gaaaacgcagaagaaagccctgattag
DBGET
integrated database retrieval system
