Carassius auratus (goldfish): 113056455
Help
Entry
113056455 CDS
T07313
Name
(RefSeq) transcription factor Sox-9-A-like
KO
K18435
transcription factor SOX9 (SOX group E)
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
caua03000
]
113056455
Transcription factors [BR:
caua03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
113056455
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
Sox_N
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
113056455
NCBI-ProteinID:
XP_026079036
Ensembl:
ENSCARG00000023661
UniProt:
A0A6P6L6C3
LinkDB
All DBs
Position
37
Genome browser
AA seq
465 aa
AA seq
DB search
MNLLDPYLKMTDEQEKCLSDAPSPSMSEDSAGSPGSGSGSDTENTRPPENSLIAPDGTLG
EFKKDEEDKFPVCIREAVSQVLKGYDWTLVPMPVRVNGSSKNKPHVKRPMNAFMVWAQAA
RRKLADQYPHLHNAELSKTLGKLWRLLNEGEKRPFVEEAERLRVQHKKDHPDYKYQPRRR
KSVKNGQGESEDGSEQTHISPNAIFKALQQADSPASSMGEVHSPGEHSGQSQGPPTPPTT
PKTDVQPGKVDLKRETRPLQENTGRPLNIDFREVDIGELSNDVIETFDVNEFDQYLPPNG
HATNASYVGGYATWMGKPQNGSPSSTQLTPLGTGGSGDQDQPRTTHIKTEQLSPSHYNEQ
QQGSPQHVSYGSFNVQHLQHYSTSFPSITRAQYEYSDHQGGANSYYTHAGGQSSGLYSTF
SYMSPSQRPMYTPIADSTGVPAIPQSNHSPQHWEQQPVYTQLSRP
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgaatctactagatccctacctgaaaatgacagatgagcaagagaagtgtctgtctgac
gccccaagtccgagcatgtccgaggactccgcgggctccccgggctccggctcgggctcc
gacaccgagaacacccgtccgcccgagaacagcctcatagccccggacgggacgctcggc
gagttcaagaaggacgaagaagacaagttcccggtgtgcatccgagaggcggtgtctcag
gtgctgaaggggtacgactggacgctcgtgcccatgccggtgagagtgaacggatcgagc
aaaaacaagccgcacgtgaagagaccgatgaacgcgtttatggtgtgggcgcaagcggcg
cgcaggaagctcgcggatcaatacccgcacctccacaacgccgagctcagcaaaactctg
ggaaaactgtggagattgctgaatgagggcgaaaagcgtcccttcgtggaggaggctgag
cgcctcagggttcagcacaagaaagatcaccccgactacaaatatcagcctcggcggagg
aagtcggtgaagaatggccagggcgagtctgaggacggcagcgagcagactcacatctcc
ccgaatgccatcttcaaagccctccagcaagccgactcgcccgcgtccagcatgggagag
gtgcactcgcccggcgagcactcaggccagtcccaagggccgcccactcctcccaccacc
ccaaaaactgacgtgcagccaggcaaagtggatctgaagcgagagacccgtccacttcag
gaaaacacggggcgtccgctcaacatcgacttccgtgaagtggacatcggcgagctcagt
aacgacgtcatcgaaactttcgacgtcaatgagtttgaccagtacctgccgccgaacggg
catgccaccaacgcgtcctacgtgggcggctacgccacctggatggggaagcctcaaaac
ggcagcccctcaagcacccagctgactccactcgggacgggtggctccggggatcaagac
caaccgagaacgacgcacatcaaaaccgaacagctcagtcccagccactacaacgagcag
cagcagggctccccgcagcacgtcagctacggctccttcaacgtccagcacctccagcac
tacagcacttcattcccatccatcacccgggcgcagtacgaatactccgaccaccagggc
ggcgccaactcctattacacccacgctggaggtcagagctccggcttgtactccaccttc
agctacatgagccccagccagaggcccatgtacacccccatcgctgactctaccggggtt
cctgccattccccaatccaaccacagcccccagcattgggagcagcagccggtctacaca
cagctgtccagaccctga
DBGET
integrated database retrieval system
