Carassius auratus (goldfish): 113056886
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Entry
113056886 CDS
T07313
Symbol
six6
Name
(RefSeq) homeobox protein SIX6
KO
K19473
homeobox protein SIX3/6
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
caua03000
]
113056886 (six6)
Transcription factors [BR:
caua03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
113056886 (six6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SIX1_SD
Homeodomain
Homeobox_KN
HTH_3
Motif
Other DBs
NCBI-GeneID:
113056886
NCBI-ProteinID:
XP_026079585
Ensembl:
ENSCARG00000009509
UniProt:
A0A6P6L525
LinkDB
All DBs
Position
38:7988216..8001097
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AA seq
245 aa
AA seq
DB search
MFQLPILNFSPQQVAGVCETLEESGDVERLGRFLWSLPVAPSACEVLGKNESVLRARAVV
AFHAGNFRELYHILENHKFTKDSHAKLQALWLEAHYQEAEKLRGRPLGPVDKYRVRKKFP
LPRTIWDGEQKTHCFKERTRHLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNWFKNRR
QRDRAAAAKNRLQQQVLSGGSVRSLGDDDTTVDRLGPASSPEVSLSSKAATSAISITSSD
SECDI
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgttccagctgcccatcttgaatttcagcccccagcaggtcgcgggggtctgcgagacg
ctcgaggagagcggcgacgtggagagactcggtcgcttcctctggtcactcccggtggcg
ccgtccgcctgcgaagtcctcgggaagaacgagtctgtcctgcgcgcgcgggcggtcgtg
gccttccacgcgggaaacttccgcgagctctaccacatactagagaaccacaaattcaca
aaggactcacacgcgaagctgcaggcgctttggctcgaggcgcactaccaggaggctgag
aaactccgtgggcgtcccttaggacccgtggacaagtaccgcgtccggaagaagtttcca
ctgcctcggacgatatgggacggcgaacagaaaacgcactgcttcaaggagaggacgcga
catcttttgagagagtggtacctgcaggatccttacccgaacccgagcaaaaaaagagag
ctggcgcaggcgactggactcacacccactcaagtgggcaactggtttaaaaaccggagg
cagagagaccgagcggcagcggccaagaacaggctacagcagcaggttctgtccggtggc
tcggtccgatcgcttggggacgatgacaccacagtggaccgcctgggtcccgcctcgagc
ccagaagtcagtctctcgagcaaggccgccacctccgccatctccatcacctccagcgac
agcgaatgtgacatctaa
DBGET
integrated database retrieval system
