Carassius auratus (goldfish): 113056892
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Entry
113056892 CDS
T07313
Symbol
mnat1
Name
(RefSeq) CDK-activating kinase assembly factor MAT1 isoform X1
KO
K10842
CDK-activating kinase assembly factor MAT1
Organism
caua
Carassius auratus (goldfish)
Pathway
caua03022
Basal transcription factors
caua03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
113056892 (mnat1)
09124 Replication and repair
03420 Nucleotide excision repair
113056892 (mnat1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
caua03021
]
113056892 (mnat1)
03400 DNA repair and recombination proteins [BR:
caua03400
]
113056892 (mnat1)
Transcription machinery [BR:
caua03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
113056892 (mnat1)
DNA repair and recombination proteins [BR:
caua03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
113056892 (mnat1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MAT1
zf-C3HC4_5
zf-RING_5
zf-RING_UBOX
TRAF3_RING
zf-UDP
BAR_3
zf-C3HC4
DUF604
Motif
Other DBs
NCBI-GeneID:
113056892
NCBI-ProteinID:
XP_026079591
Ensembl:
ENSCARG00000009541
UniProt:
A0A6P6L7Z3
LinkDB
All DBs
Position
38:8024557..8047348
Genome browser
AA seq
375 aa
AA seq
DB search
MDDQGCPRCKTTKYRNPSLKLMVNVCGHTLCESCVEMLFVRGSGNCVQCNTPLRKSNFRV
QLFEDPAIDKEVEIRKKVLKIYNKREFDFSSLKEYNDYLEQVEDIVFNLTNNIDVERTKQ
IMEQYQRDNKDIIQKNKAKLTREQEELEELLLQEQQVSEQRRLETLQEEQRQLQAKRKNK
QALLDELEISKLPAAVLLAQHKDRAVQLETQIEKQKQNVKPANIFSTGIMMGQTVSFASV
SRVEEVLYVYQPLCIDTYGPPVPELDQLGRLGFSLLKSRADKSLSVCVYVCVCVCEVDRE
TDCFLLFVLVCFDSELVEIYVGLVCVFGGSCMYSLPPHPRGEPRPLCPPFCTCINTDWVG
HFIKDSCVRLRLEKR
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atggatgatcagggatgcccgaggtgcaagacgaccaaatacagaaatccatctctgaag
ctgatggtgaatgtgtgcggacacacgctgtgtgagagctgtgtggagatgctgtttgtc
cgtggctcaggtaactgtgtgcagtgcaacactccgctcagaaagagtaatttccgcgta
cagctcttcgaagatccagccatcgataaagaggtggagatccgcaagaaagttctcaaa
atctataataagagagaatttgatttttcctctctgaaagaatataatgactacctagag
caagtggaggacattgtgtttaacctgactaataacatagatgtcgaaaggaccaagcag
attatggaacagtaccagcgggataacaaagacattatacagaaaaacaaagccaaacta
acacgtgagcaggaggagttggaggagctgttgttacaggagcagcaggtttctgagcaa
aggagactggagacccttcaggaggaacagagacaactacaggccaagaggaaaaacaaa
caggccctgctggatgaactggaaatttccaagttaccagctgctgtgctgttggcccaa
cataaagatcgagctgttcaactggagacacagatagaaaaacaaaagcaaaatgtcaag
ccagcaaacatcttctctactggaataatgatgggtcagactgtttcttttgcttccgtg
tctcgcgtagaggaggtgttgtacgtctatcagcctctgtgcattgacacatatgggccg
cccgttccagaactggatcaattgggccgattaggattcagtcttttgaagtcgagagca
gacaagtctctgagtgtttgtgtgtatgtgtgtgtctgtgtgtgtgaggttgacagagag
acagattgttttttgctatttgtcttagtgtgttttgacagtgagttagtggagatttat
gttggactggtttgtgtttttggagggtcatgtatgtattcacttcctcctcaccctcgg
ggcgaaccccgtcctttgtgccccccgttctgtacctgtataaatacagattgggtgggg
cattttattaaagacagctgtgtgcgattgcgtcttgaaaagaggtga
DBGET
integrated database retrieval system
