Carassius auratus (goldfish): 113057109
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Entry
113057109 CDS
T07313
Name
(RefSeq) nuclear pore complex protein Nup50-like
KO
K14295
nuclear pore complex protein Nup50
Organism
caua
Carassius auratus (goldfish)
Pathway
caua03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
113057109
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
caua03019
]
113057109
Messenger RNA biogenesis [BR:
caua03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
113057109
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUP50
Ran_BP1
Motif
Other DBs
NCBI-GeneID:
113057109
NCBI-ProteinID:
XP_026079989
Ensembl:
ENSCARG00000023607
UniProt:
A0A6P6L607
LinkDB
All DBs
Position
4:complement(5774217..5786444)
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AA seq
454 aa
AA seq
DB search
MAKRIAENELTDRNWDQEDEGEEAGMFSIASDDVMKNRAIKKARRRNVGAEGESGGSFKA
FKGFSLTPATGSTSFSGFGNGAGFKPLSSLTNGSVTSVAPSFAGFNVPTSAKTNSGPLMF
NSSTPSKPTDGDVTSNGSAPSSKEYNRQLTALNCSVRDWITKHVNDNPLCDLNPIFRDYE
RHLASIEKKYGSCASESGVESTSFGGDQKQLLTGGKTASVSVSGTSAAVTASVSGAAPQL
FSFKDKDVAAPDKPAAVAPPGVSFNFGQKVDSSVLGTLASSGAPSFSFSSSSGVSVFGTA
VSSVSPAVSSSLNAASSSQTADENGEESEEPPVPVVKEIKEKDAFYSKKCKLFYKKDGEF
KEKGVGTLHLKMVAESKLQLLVRADTNLGNILLNIMVSSSMPCSRTGKNNVMVVCVPNPP
VDDKNPNTPVPVLIRVKTGEDADELHRTLQEKKA
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atggccaaacggattgctgaaaacgagttgaccgacaggaactgggatcaggaagatgaa
ggcgaggaggcaggaatgttttcaattgcgagtgacgatgtgatgaagaatcgcgccatc
aagaaagccaggcgtcgtaacgtaggagcagagggagagagtggagggtctttcaaagca
tttaaggggttctctctgaccccggccacagggtcgacatcgttctctggcttcggtaat
ggtgctggtttcaaacctctctccagcctgaccaatggcagcgtaacatcggtggcccca
tcctttgctggttttaatgttcccacatctgcgaaaactaacagtggccccttaatgttc
aacagctccaccccctccaaacccacagatggtgatgtcacctctaatggctccgcccct
agcagtaaagaatacaaccggcagctcaccgcactaaactgctctgtgcgcgactggatc
accaagcatgtcaatgacaaccccctgtgcgacctcaaccccatcttccgtgattacgag
cgacacctggccagcatcgagaagaaatatggcagctgtgcatcagaaagcggggtggag
agcacgtcgtttggaggggatcagaagcagcttctgacaggtggaaaaactgcttccgtt
tctgtttctggcacgagtgctgctgtgaccgcatctgtcagcggtgcagcgccacagctc
ttttcatttaaagacaaggatgttgctgcaccagacaaaccagcagccgtggctcctcca
ggcgtctcctttaattttggccagaaggtggacagctctgtgctaggcacacttgcgtcc
agcggagcaccgtcgttctcgttttcctcctcttcaggcgtgtctgtgtttggaacagcc
gtcagtagtgtcagtcctgcggtgtcatcctctctgaatgcagccagcagcagccagact
gcagacgagaacggagaggaatcggaggagccgcctgttcctgtggtgaaagagatcaag
gagaaagacgccttctactccaaaaagtgtaagttgttctataagaaggacggagagttt
aaggagaagggggtgggaacactgcatctgaagatggtggctgagagcaaacttcagctt
ttggtgcgagccgacaccaacctggggaacatcttgttgaacatcatggtgtcctcttcc
atgccctgctcacgaaccggcaaaaacaacgtgatggtggtgtgcgtgccaaaccctcct
gtggacgacaagaaccccaacacacccgtcccagtgctcatacgcgtgaaaacaggagag
gacgcggacgagctgcaccgaaccctgcaagagaagaaagcctaa
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