Carassius auratus (goldfish): 113057123
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Entry
113057123 CDS
T07313
Name
(RefSeq) homeobox protein SIX2
KO
K19472
homeobox protein SIX2
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
caua03000
]
113057123
Transcription factors [BR:
caua03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
113057123
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SIX1_SD
Homeobox_KN
Homeodomain
HTH_3
YdaS_toxin
Phage_mat-A
HTH_72
Motif
Other DBs
NCBI-GeneID:
113057123
NCBI-ProteinID:
XP_026080011
UniProt:
A0A6P6L9B1
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Position
38:complement(12776537..12779267)
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AA seq
288 aa
AA seq
DB search
MSMLPTFGFTQEQVACVCEVLQQGGNIERLGRFLWSLPACEHLHKNESVLKAKAVVAFHR
GNFRELYKILESHQFSPHNHPKLQQLWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRS
IWDGEETSYCFKEKSRSVLREWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR
AAEAKERENNENSNTNSHNPLTSSMNGNKTILGSSDDDKTPSGTPDHTSSSPALLLTSNP
GLPSLHGLAPPPGPSAIPVPSADSVHHHHSLHDTILNPMSSNLVDLGS
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgtctatgcttcccacattcggctttacgcaagagcaagtggcgtgcgtctgcgaggtc
cttcagcagggtggaaacattgaacgtctcgggcgcttcttgtggtctctgccggcttgc
gaacatctccacaagaacgagagtgtgctcaaagcaaaagcagtggtcgcttttcatagg
ggaaatttcagagagctttataagattctggagagccaccagttctctccgcacaaccat
ccgaagctgcagcagctgtggctcaaagcgcattatgtcgaggctgagaagctccggggc
cgccctcttggggctgttgggaagtaccgcgtccgaagaaagtttccgctaccccgctcc
atttgggacggcgaggagacaagttactgctttaaagaaaagagcaggagcgtgctgcgg
gaatggtacacccataacccgtacccttccccgcgggagaagagggaactagcagaggca
acggggctaacgacaacacaagtcagtaactggtttaaaaacagacgtcaacgcgaccga
gcagcggaggccaaggaaagggagaacaatgagaactcgaacacaaacagtcacaacccg
ttaacgtcttccatgaatggaaataagactattttaggaagctcggacgacgacaaaacg
ccgtctggtaccccagatcacacctcgtcaagcccggccttgctcctcacgtcaaacccc
gggcttccgtccctccacggcctcgcacctccacccggtcccagcgccatcccagtgcct
agtgcagattccgtgcatcaccaccactcattacacgacactatactgaaccctatgtca
tcaaacttggtcgacctcggctcttaa
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