Carassius auratus (goldfish): 113057301
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Entry
113057301 CDS
T07313
Name
(RefSeq) zinc finger SWIM domain-containing protein 8-like isoform X1
KO
K25207
zinc finger SWIM domain-containing protein 8
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
caua04121
]
113057301
Ubiquitin system [BR:
caua04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
113057301
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZSWIM4-8_C
SWIM
Motif
Other DBs
NCBI-GeneID:
113057301
NCBI-ProteinID:
XP_026080377
Ensembl:
ENSCARG00000006648
UniProt:
A0A6P6L9H1
LinkDB
All DBs
Position
38:19273424..19313111
Genome browser
AA seq
1920 aa
AA seq
DB search
MELMFAEWEDGERFSFEDSDRFEEDSLCSFISEAESLCQNWRGWRKQSAGPNSPTVKIKD
GQVIPLVELSAKQVAFHIPFEVVEKVYPPVPEQLQLRIAYWSFPENEEDIRLYSCLANGS
PDEFQRGEQLYRVRAVKDPLQIGFHLSATVVSPQAGQSKGAYNVAVMFDRCRITSCSCTC
GAGAKWCAHVVALCLFRIHNASAVCLRAPVSESLSRLQRDQLQKFAQYLISELPQQILPT
AQRLLDELLSSQSTAINTVCGAPDPTAGPSASDQSTWYLDESTLSDNIKKTLHKFCGPSP
VVFSDVNSMYLSSTEPPAAAEWACLLRPLRGREPEGIWNLLSIVREMFKRRDSNAAPLLE
ILTEQCLTHEQIIGWWYSVRTSASHSSASGHTGRSNGQTEVAAHACASMCDEMVVLWRLA
VLDPTMSPQRRLEVAAQLKQWHLKVIEIVKRGQHRKSLDKLFQGFKPAVECCYFNWEVAY
PLPGITYCNADKKNASFCWARMVQQQRGAKAGTSGEPGEGARCGTSEGSSSEHKSRSNSH
LSQQEVAVRPKETIVCKRKGMVCVGGRVSLPLQEGGKGNYKASSSSPSAGSKAKLTQSNK
GSCGSSSGVSGKHPSAKRRTSSEDSSLEPDMAELSLDDGSSLALGAEASNTFDFLPPPPE
MLPSPSPLLQKPLKYSGSASKERAFETKRVLPSAADAHACSIAAPVVAAMEKEVEVEADL
DENGGDEDPVDDTRPSAPIPSKDQQGRREGDGSGASGASGPQAAEAAGADAVGEDDYQAY
YLSAASEEGADRGVADGNHEEEPDIFAGIKPLEQEGRMEILFACAEALYAHGYSNEACRL
AVELARDLLSNPPDLKVEQPQTKGKKSKVSTTKQTQVATYALSKVAFLLTVLSERLELHN
LAFNTGMFSLELQRPPASTKALEVKLAYQESEVVALLKKIPLGLVEMTSIRDRAEQLRDG
NFCDYRPVLPLMLASFIFDVLCTPVVSPTGSRPPSRNRNNEMPGDEELGFEAAVAALGMK
TTVSEAEHPLLCEGTRREKGDLALALMITYKDDQSKLKKILDKLLDRESQTHKPQTLSSF
YSSKPATSSQKSPSKHATHGASGATGGVSKHTTSATSAAVQGVTGGGAAGQQGSLVGGGV
QNTVTGEGIADNRDQEGAQSTSCEQQSEAAPFKPEGTVPSRLALGGRGAYGTRCWGSPVR
QKKKHTGMASIDSSAPETTSDSSPTLSRRPLRGGWTAASWGRGQDSDSISSSSSDSLGSS
SSSGSRRAGGGARAKSTDTSRYKGRRPECHAPHVPNQPSEAAAHFYFELAKTVLIKAGGN
SSTSIFTQPSASGGHQGPHRNLHLCAFEIGLYALGLHNFVSPNWLSRTYSSHVSWITGQA
MEIGSAALNILVECWDGHLTPPEVASLADRASRARDPNMVRAAAELALSCLPHAHALNPN
EIQRALVQCKEQDNLMLEKACMAVEEAAKGGGVYPEVLFEVAHQWYWLYEQTVGGGSGAQ
REGSGRCGANGGVRRTPPEGICGILDNTGVLDSSGVAAVTTTVTAAAVVPVISVGSTIYQ
SHALPGSAMAHTQGLHPYTTIQTHLPTVCTPQYLGHPLQHVPRPAVFPVSGAAYPQVYDS
RKTYHPGFKSVCLSSQGMHPAFIGAQYPFSVATGPHPPMAATAVTFPGVPVPSMTQIAVH
PYHTTEAALPLSTTVAGGIHSGATIQAIQGASLPGLSPQPAPLVSTPFPVEDEQHSQPVS
QQGLHYLHSAYRVGMLALEMLGRRAHNDHPNNFSRSPPYTEDVKWLLGLAARLGVNHVYQ
FCVGAAKGVLSPFVLQEIIMEALQRLNPAHIHAHLRTPAFHQLVQRCQQAYLQYIHHRLI
HLTPADYDDFVNIIRSARGAFCLTPVGMMQFNDVLQNLKRGKQTKELWQRISLEMATFSP
NT seq
5763 nt
NT seq
+upstream
nt +downstream
nt
atggaactgatgttcgctgagtgggaagacggagagaggttctcctttgaagattcggac
cgttttgaggaggactcgctgtgctcgttcatatcagaggcggaaagtctctgccagaac
tggagaggatggaggaagcagtctgccggcccaaattcacccactgtgaagattaaagat
ggacaagtcatccctctggtggagctgtcggccaagcaggtggcgttccatattccattt
gaggtggtggaaaaggtctatcctccggttcctgagcagctacaattgcggattgcctac
tggagcttcccagagaacgaggaggacatcagattgtactcctgtttggccaatggcagc
cctgatgagttccagcgtggcgagcagctctatagagtgagggctgtgaaagaccctctg
cagataggtttccaccttagtgccacagtagtgtcgccccaggccggccaatcaaaagga
gcctacaatgtagctgtaatgtttgaccgctgccgcatcacttcctgcagctgcacctgt
ggagcaggagccaaatggtgtgcccacgttgtggccctctgcctcttcagaattcacaat
gcttctgctgtgtgtcttcgagcaccggtgtcagagtccctgtccagattacagcgggat
caactccagaagtttgcacaatacctcatcagtgaactcccacagcagatattgccgaca
gctcagcgtcttttagatgagcttctgtcctcccagtctactgctattaacaccgtgtgc
ggagccccggatcctacggctggcccttcggcgtctgaccagagcacctggtatctagat
gagtccaccctcagtgacaacataaagaagaccttgcacaagttctgtggcccgtcacct
gttgtgtttagtgatgtgaactccatgtacctgtcatccactgagcctccggcagctgct
gaatgggcttgtttgctcaggcccctgcgaggtagagagccagagggcatctggaacctt
ctgtccatcgtcagagagatgtttaagaggagagacagcaacgctgcgcctctgttagaa
atcctcactgaacagtgtctcacccatgaacagatcattggctggtggtatagtgtgagg
acttccgcctctcacagcagtgctagtgggcacacaggtcgcagtaatggccagacagag
gttgcagcacatgcgtgtgccagcatgtgtgatgaaatggttgtcttatggagactggca
gtactagaccccaccatgagtccccagaggcgtttggaagtggctgcccagctaaagcag
tggcatctgaaggtaatcgagattgtgaaacgggggcagcaccgcaagtctcttgacaaa
ctcttccagggcttcaaaccagctgtggagtgctgctacttcaactgggaagtggcctac
cctttacctggcatcacctattgcaatgcagacaagaaaaatgcctcattttgttgggcc
aggatggtgcagcagcagaggggtgctaaagctgggaccagtggggaaccaggagaagga
gctcgctgtggaacgtcagaaggttcttcctctgaacacaagtcacggagcaactcccat
ctttcccagcaggaggtggctgtccgccctaaggagaccattgtgtgcaagaggaaagga
atggtttgtgtaggtggaagggtctctctcccgcttcaggagggaggtaaaggcaattat
aaagctagtagctcctccccatcagctggtagtaaggccaagctcacacagagcaacaag
ggttcgtgtggaagttcgagtggcgtcagcgggaagcaccccagcgctaaacggcgaact
agcagtgaggatagctctctagaacctgatatggcggagctgagtctggacgatggctcc
agcctggcacttggagcggaggcctcgaacacctttgacttccttcctcctccgccagag
atgctgccatcacccagccctcttctccaaaagccactcaaatacagtggttctgcttca
aaagagcgtgcttttgagacaaaacgtgtgctgccctctgctgctgatgcccatgcctgc
tccatcgcagctccagtagtggcagctatggagaaagaggtggaagtggaggcagatctg
gatgagaatggaggagacgaagaccccgtagatgatactcggccctctgcaccgatcccc
agcaaggatcagcagggacgcagagagggagatgggagcggggcttcaggggcctcagga
cctcaagcagctgaggcagcaggagcagatgctgtgggtgaagatgactatcaagcttat
taccttagtgctgcatcagaagagggagctgatagaggggttgcagatggcaaccatgaa
gaagagcctgacatctttgctgggattaaacctctggagcaggagggcaggatggagata
ctgtttgcctgtgcggaggctctctatgctcatggctatagtaatgaagcatgccgattg
gctgttgaacttgctcgagatctgctgtctaaccctcctgacttgaaggtggagcagccg
cagacaaagggtaaaaagagtaaagtgtcaaccactaaacagacgcaggtggccacttac
gccttgtctaaagtagccttcctgctgactgtgttgagtgagaggcttgagctccataac
ctggcattcaacactggcatgttctctctggagctccagagaccaccagcttctactaaa
gctctggaggtgaagctggcatatcaggagtcagaggtggtggccctgctgaagaagatt
cctctgggtcttgttgaaatgacttccataagggaccgagcagagcagctccgtgatgga
aacttctgtgactatcgacccgttttacctctcatgctggcaagcttcatatttgatgta
ctgtgcacccctgtggtctctcccacgggctctcgacctcctagccggaaccgtaacaat
gaaatgcctggtgatgaggaactgggatttgaggcagctgtagccgctcttggtatgaag
acaacagtcagtgaggcagagcatcctctgctatgtgaaggcacacggagagagaaagga
gacctggctctagcactgatgatcacttataaagatgaccaatcaaagcttaaaaagatt
ctggacaagctcctggatcgtgagagccagacccacaagccgcaaactctgagctcattt
tactcgagcaaaccagccaccagcagccaaaagagcccgtctaaacatgccacccatggt
gctagcggagctacgggaggagtgtcaaagcacaccacttcagcaacatcagctgctgtg
cagggcgtgactggagggggagccgcgggacagcagggcagtttggtgggtggtggagtt
cagaacacggtgacaggagagggcatcgctgacaacagagatcaagagggtgcgcagtcg
acctcctgtgagcagcagagcgaagctgcccccttcaagcccgagggcactgtgcccagt
cgtctggcactggggggccgtggggcgtacggcacacgctgctggggatcacctgtacgg
cagaaaaagaaacacaccggcatggcaagcattgacagcagtgctccagagaccacctca
gacagctctcctaccctcagtcgacgtccactgcgaggtggttggacagctgcttcctgg
gggagaggccaggacagtgacagcattagcagctcttcctctgattcacttggctcatcg
tcatctagcggctcacgcagagctggaggaggagccagagccaagagtactgacaccagc
aggtataaaggccgccggcctgaatgccacgctccacacgtgcccaaccagccatctgag
gcagcagcccatttttactttgagctggccaagactgtgttgattaaagctggtggaaac
agctccacctccattttcactcaaccctctgccagcggaggccatcaagggccccaccgc
aacctgcatctgtgtgcctttgaaattggcctgtatgccctcggcctgcataattttgtc
tctccaaactggctgtcaaggacatattcctcacatgtatcctggattacaggccaggct
atggagattgggagtgctgccctcaacatcctggtggaatgctgggatgggcacctcaca
cctccggaggtggcgtcactcgcagaccgtgcatcacgagcacgggatcccaatatggtg
cgtgctgcggcagagctagccttgagctgcttgcctcatgctcatgccctcaatcccaac
gagattcagagagccctggtgcagtgcaaggagcaggataatctgatgctggagaaggct
tgcatggcagttgaggaggctgcaaagggaggcggtgtttatccggaggtcttgtttgag
gtggctcaccagtggtattggctgtatgagcaaacagtgggtggaggctctggggcccag
cgagaggggtctggccgctgtggggccaatggtggagtcagaagaacgccacccgaggga
atctgtggtatcctggataacacgggtgtcttggactcttcaggtgtagcagctgtaact
acaacagtgactgcagccgctgtagttcctgtcatttctgtcggctccaccatctaccag
tcacacgcgctgccgggctcagccatggcacacacacaaggcctgcatccctacaccacc
atccaaacccatctgcccaccgtctgcaccccgcagtatttgggtcacccccttcagcac
gttccccgtcctgctgtcttccctgtgtctggggccgcctacccacaagtatatgactcg
aggaagacgtatcatccaggttttaagagcgtctgtttgtcttctcagggaatgcaccct
gcttttattggtgctcagtacccattttctgtggctactggccctcatcctccaatggca
gcgactgctgtcactttccctggagtcccagtgccgtccatgactcagatcgctgtccac
ccataccataccacagaggcagccctgcctcttagcactactgtggcaggaggaatacac
tcaggcgccaccatccaggccattcagggggcttctcttcctggactctcgccccagccc
gccccactggtcagcacacccttccctgtggaagacgagcagcacagtcagccagtcagc
cagcagggcctgcactacctccactcggcctacagagtcggcatgctggccttggagatg
ttgggaaggagggcccacaacgatcatccaaacaacttttcccgtagccccccgtacacc
gaagacgtcaagtggctgttgggcctggctgctcgtcttggtgtgaaccacgtgtaccag
ttttgcgtgggggcagcgaaaggtgttcttagtccgtttgtccttcaggagatcattatg
gaggctctgcagaggttaaatcctgcacatatccacgcacacctccgcactcctgccttc
caccagctcgtgcagcgctgccagcaggcctacttacagtacatccaccataggctgatc
catctgactcctgccgactacgacgactttgtgaacatcatccgaagtgcccgcggggcg
ttttgcctgacaccagttggcatgatgcagttcaacgatgtgctgcagaacctgaagagg
ggcaaacagactaaagaactgtggcagcggatctcgttggagatggccactttctcaccc
tga
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