Carassius auratus (goldfish): 113057315
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Entry
113057315 CDS
T07313
Name
(RefSeq) nuclear factor NF-kappa-B p100 subunit-like isoform X1
KO
K04469
nuclear factor of kappa light polypeptide gene enhancer in B-cells 2
Organism
caua
Carassius auratus (goldfish)
Pathway
caua04010
MAPK signaling pathway
caua04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
113057315
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
113057315
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
caua03000
]
113057315
Transcription factors [BR:
caua03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
113057315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Ank_2
Ank
Ank_3
Ank_4
Ank_5
Death
Motif
Other DBs
NCBI-GeneID:
113057315
NCBI-ProteinID:
XP_026080427
Ensembl:
ENSCARG00000014566
UniProt:
A0A6P6L9M5
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All DBs
Position
38:19748817..19759381
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AA seq
910 aa
AA seq
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MAGALRMDETHFNMKFSNPEFMVELPYLHEPFEVKPEPYVPETVHGPYLQIIEEPKQRGF
RFRYECEGPSHGGLPGASSERNRRTYPTVKVSNYVGHARVEVQLVTHTDPPRVHAHSLVG
RHCTDNGICTIDVGPNDLTAQFSNLGILHVTKRGVHEVLTKRLKEEKRRIKEPGCKFTDA
EEQAILQEAKELGKTMDLNIVRLKFTAYLQDSNGSFTRALNPVVSNPIYDSKSPNASNLK
ISRMDKTSGSVLGGEEVFLLCDKVQKDDIDIRFYEEEDDGGWEAFGDFSPTDVHKQYAIV
FKTPPYRCTDITRPVTVFLQLKRKKGGDCSEPKQFTYIPHNQDKEEVQRKRMKVLHQSYD
HWRGGGAGAYGGPGSGTGGGGGGMGGGFPFNPPMDGSGFYIGGCGGFSGGAQMSGSTPQA
EGSPNQSTNTQTQSGSQMQQQLFQIATALQSRASLMAKCSARALLQYCSTGDVRPLLALQ
RHLCGVQDENGDTPLHLAIIHQQPVVVQQLIQALNNTPQQKFINKLNHLNQAPLHLAVIT
KQARLVEMLMKTGADPSLLDQEGRTALHLAAHTGDEAVLRVILGLLGERHAHLINSADFS
GQYPVHLAVKKDGEHCLRLLVGAGAKINMPEQKSGCTALHLAVRDNFLKLACYLITELQA
DVNACTYGGNSPLHLAASQGSPPLCSMLIAAGADKRMENDEPLFFQSSSSSDEDDESEKN
EVDRQLPDLMVQQVHCMSISSERGTFNPRKRPAAGHTPFDLAKCQKVRDLLDGRKGPKSS
SLAPKRTKITTEEVNQGLDSEVLTKLCSILIEDHVPWRELAEKLGMLTLTHLYQESGSPC
QKLLENYQLSGGPVDGLVEALQSLGVSEGVRLLRDSQPREDKQSTDSKEDSGFGSQSIEE
EMGNPAVANH
NT seq
2733 nt
NT seq
+upstream
nt +downstream
nt
atggctggagcactaaggatggatgaaacacattttaacatgaagtttagcaatcctgag
ttcatggtggagcttccatatctgcacgaaccttttgaggtcaagcctgaaccctatgtg
ccagagacagttcatgggccttatctacagattattgaggagccaaagcagagaggattc
agatttcgttatgaatgtgagggcccatcccatggtggtctgccaggggcctccagtgag
aggaacagaaggacgtatcccacagtcaaggtgtcaaactacgtgggtcacgctcgcgta
gaggttcagcttgtgacgcacacagaccccccacgtgtccacgcacacagccttgtgggt
cgccactgtactgacaacggaatatgcaccattgatgtcgggcctaatgatctcacagca
caattcagtaatttaggcatcctccatgtcactaagagaggagtgcatgaagtattaacg
aaaagactgaaagaagagaagaggaggataaaagagcctggatgtaaatttactgatgca
gaggaacaggctattttgcaagaggccaaagaactgggcaaaaccatggacctaaacatt
gtgagattaaagtttactgcgtatttgcaggacagcaatgggagtttcacaagagccttg
aatccagttgtctccaaccctatctatgatagcaaatcaccaaatgcttcaaatctgaag
atctcccgcatggacaaaacctctggatcagttctgggaggagaagaggtctttctgctc
tgtgataaagttcaaaaagatgatattgacattcgtttttatgaggaggaagatgatgga
ggatgggaggcatttggagacttctcccctactgatgtccacaaacagtatgcgatcgtg
tttaagaccccaccataccgctgcacagatatcacacgtcctgtcacagtcttcctgcag
ctcaagaggaagaagggaggcgactgcagcgaacccaaacagttcacctatattcctcac
aatcaagacaaagaagaggttcagaggaagaggatgaaggtacttcatcagtcctacgat
cactggcggggaggaggagcaggggcctatgggggtcctggatctggaacaggaggagga
ggaggaggaatgggaggaggttttccatttaatcctccgatggatggttcagggttttac
attggtggatgcggtggatttagcggcggggcacagatgtcaggctccacaccacaggct
gaaggatctccgaatcagtcgacaaacacacaaactcagtctggctctcaaatgcaacag
cagctctttcagattgccacagctctgcagagtcgtgcctctttgatggcaaagtgctct
gctcgtgctttgttacagtactgcagcactggggatgtgcgccccctgctggctctgcaa
agacatctgtgtggagtgcaggacgagaacggagacactcctttgcacttggccattatc
catcagcaacctgttgtggtacaacagctcattcaggccctgaacaacactccacagcag
aagttcatcaacaagctcaaccacctcaatcaagctccattgcatctggctgtgatcaca
aagcaggccaggttagttgagatgctgatgaaaacgggtgcagacccgagcctgctggac
caggagggccggacagcgcttcacttggccgctcacaccggtgacgaggccgtgctacga
gtgatcctgggtctgctgggagagcgtcatgcccatttaataaactctgctgacttctca
ggtcaatatccagtccatctcgcagtaaagaaagacggagagcactgtcttcgattgttg
gtgggggcaggagcaaagattaacatgcccgagcagaaaagcggctgcacagcactacac
ctggcagtgagggacaactttttaaaactggcctgttatctcattacagagctgcaggct
gacgtgaatgcgtgtacctacgggggcaacagtcctcttcaccttgctgccagtcagggc
tctccacctctctgctccatgctgatagctgcaggtgctgataaacgcatggagaacgac
gagcctctttttttccagagctcgtcctcctcagatgaagatgacgagagcgagaagaat
gaagtcgacaggcagcttccagatctcatggttcagcaagttcactgcatgtcgatatca
tctgaaagaggaacatttaacccacgcaagagacctgcagcgggacacacaccatttgac
ctggccaaatgccaaaaggttagagatcttttagatggcaggaaaggacccaagtccagt
tctctcgcccccaagaggaccaaaataaccaccgaggaagtgaaccaaggtttggacagt
gaggtgctcaccaaactgtgtagtattctcattgaagaccatgtaccctggagagagctg
gcggaaaaactgggcatgctcacactcactcacctgtaccaggagagtggctcaccctgc
cagaagcttctcgagaactaccagttgagtggtggtcctgtggacggcctggtggaggcg
ctgcagtctctgggtgtgagtgaaggagtgagactgctgagagacagccaacccagagag
gacaagcagagcacagattctaaagaggacagcggctttgggagtcagtccattgaagag
gagatgggaaatcctgcagtggccaatcactga
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