KEGG   Carassius auratus (goldfish): 113057323
Entry
113057323         CDS       T07313                                 
Name
(RefSeq) zinc finger SWIM domain-containing protein 8-like isoform X1
  KO
K25207  zinc finger SWIM domain-containing protein 8
Organism
caua  Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:caua00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:caua04121]
    113057323
Ubiquitin system [BR:caua04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul2 complex
    Target recognizing subunit
     113057323
SSDB
Motif
Pfam: ZSWIM4-8_C SWIM
Other DBs
NCBI-GeneID: 113057323
NCBI-ProteinID: XP_026080452
Ensembl: ENSCARG00000017430
UniProt: A0A6P6L9P4
LinkDB
Position
38:complement(19935403..19975995)
AA seq 1920 aa
MELMFAEWEDGERFSFEDSDRFEEDSLCSFISEAESLCQNWRGWRKQSAGPNSPTVKIKD
GQVIPLVELSAKQVAFHIPFEVVEKVYPPVPEQLQLRIAYWSFPENEEDIRLYSCLANGS
PDEFQRGEQLYRVRAVKDPLQIGFHLSATVVSPQAGQSKGAYNVAVMFDRCRITSCSCTC
GAGAKWCAHVVALCLFRIHNASAVCLRAPVSESLSRLQRDQLQKFAQYLISELPQQILPT
AQRLLDELLSSQSTAINTVCGAPDPTAGPSASDQSTWYLDESTLSDNIKKTLHKFCGPSP
VVFSDVNSMYLSSTEPPAAAEWACLLRPLRGREPEGIWNLLSIVREMFKRRDSNAAPLLE
ILTEQCLTHEQIIGWWYSVRTSASHSSASGHTGRSNGQTEVAAHACASMCDEMVVLWRLA
VLDPTMSPQRRLEVAAQLKQWHLKVIEIVKRGQHRKSLDKLFQGFKPAVECCYFNWEVAY
PLPGITYCNADKKNASFCWARMVQQQRGAKAGTSGEPGEGARCGTSEGTSSEHKSRSNSH
LSQQEVAVRPKETIVCKRKGMVCVGGRVSLPLQEGGKGNYKASSSSPSAGSKAKLTQSNK
GSCGSSSGVSGKHPSAKRRTSSEDSSLEPDMAELSLDDGSSLALGAEASNTFDFLPPPPE
MLPSPSPLLREPLKYSGSASKERAFETKRVLPSAADAHACSIAAPVVAAMEKEVEVEADL
DENGGEEDPVDDTRPSAPIPSKDQQGRREGDGSGASGASGPQAAEAAGADAVGEDDYQAY
YLSAASEEGADRGVADGNHEEEPDIFAGIKPLEQEGRMEILFACAEALYAHGYSNEACRL
AVELARDLLSNPPDLKVEQPQTKGKKSKVSTTKQTQVATYALSKVAFLLTVLSERLELHN
LAFNTGMFSLELQRPPASTKALEVKLAYQESEVVALLKKIPLGLVEMTSIRDRAEQLRDG
NFCDYRPVLPLMLASFIFDVLCTPVVSPTGSRPPSRNRNNEMPGDEELGFEAAVAALGMK
TTVSEAEHPLLCEGTRREKGDLALALMITYKDDQSKLKKILDKLLDRESQTHKPQTLSSF
YSSKPATSSQKSPSKHATHGASGATGGVSKHTTSATSAAVQGVTGGGAAGQQGSLVGGGV
QSTVTGEGIADNRDQEGAQSTSCEQQSEAAPFKPEGTVPSRLALGGRGAYGTRCWGSPVR
QKKKHTGMASIDSSAPETTSDSSPTLSRRPLRGGWTAASWGRGQDSDSISSSSSDSLGSS
SSSGSRRAGGGARAKSTDTSRYKGRRPECHAPHVPNQPSEAAAHFYFELAKTVLIKAGGN
SSTSIFTQPSASGGHQGPHRNLHLCAFEIGLYALGLHNFVSPNWLSRTYSSHVSWITGQA
MEIGSAALNILVECWDGHLTPPEVASLADRASRARDPNMVRAAAELALSCLPHAHALNPN
EIQRALVQCKEQDNLMLEKACMAVEEAAKGGGVYPEVLFEVAHQWYWLYEQTVGGGSGAQ
REGSGRCGANGGVRRTPPEGICGILDNTGVLDSSGVAAVTTTVTAAAVVPVISVGSTIYQ
SHALPGSAMAHTQGLHPYTTIQTHLPTVCTPQYLGHPLQHVPRPAVFPVSGAAYPQVYDS
RKTYHPGFKSVCLSSQGMHPAFIGAQYPFSVATGPHPPMAATAVTFPGVPVPSMTQIAVH
PYHTTEAALPLSTTVAGGIHSGATIQAIQGASLPGLSPQPAPLVSTPFPVEDEQHSQPVS
QQGLHYLHSAYRVGMLALEMLGRRAHNDHPNNFSRSPPYTEDVKWLLGLAARLGVNHVYQ
FCMGAAKGVLSPFVLQEIIMEALQRLNPAHIHAHLRTPAFHQLVQRCQQAYLQYIHHRLI
HLTPADYDDFVNIIRSARGAFCLTPVGMMQFNDVLQNLKRGKQTKELWQRISLEMATFSP
NT seq 5763 nt   +upstreamnt  +downstreamnt
atggaactgatgttcgctgagtgggaagacggtgagaggttctcctttgaagattcggac
cgttttgaggaggactcgctgtgctcgttcatatcagaggcggaaagtctctgccagaac
tggagaggatggaggaagcagtctgccggcccaaattcacccactgtgaagattaaagat
ggacaagtcatccctctggtggagctgtcggccaagcaggtggcgttccatattccattt
gaggtggtggaaaaggtctatcctccggttcctgagcagctacaattgcggattgcctac
tggagcttcccagagaacgaggaggacatcagattgtactcctgtttggccaatggcagc
cctgatgagttccagcgtggcgagcagctctatagagtgagggctgtgaaagaccctctg
cagataggtttccaccttagtgccacagtagtgtcgccccaggccggccaatcaaaagga
gcctacaatgtagctgtaatgtttgaccgctgccgcatcacttcctgcagctgcacctgt
ggagcaggagccaaatggtgtgcccacgttgtggccctctgcctcttcagaattcacaat
gcttctgctgtgtgtcttcgagcaccggtgtcagagtccctgtccagattacagcgggat
caactccagaagtttgcacaatacctcatcagtgaactcccacagcagatattgccgaca
gctcagcgtcttttagatgagcttctgtcctcccagtctactgctattaacaccgtgtgt
ggagccccggatcctactgctggcccttcggcgtctgaccagagcacctggtatctagat
gagtccaccctcagtgacaacataaagaagaccttgcacaagttctgtggcccgtcacct
gttgtgtttagtgatgtgaactccatgtacctgtcatccactgagcctccggcagctgct
gaatgggcttgtttgctcaggcccctgcgaggtagagagccagagggcatctggaacctt
ctgtccatcgtcagagagatgtttaagaggagagacagcaacgctgcgcctctgttagaa
atcctcactgaacagtgtctcacccatgaacagatcattggctggtggtatagtgtgagg
acttccgcctctcacagcagtgctagtgggcacacaggtcgcagtaatggccagacagag
gttgcagcacatgcatgtgccagcatgtgtgatgaaatggttgtcttatggagactggca
gtactagaccccaccatgagtccccagaggcgtttggaagtggctgcccagctaaagcag
tggcatctgaaggtaatcgagattgtgaaacgggggcagcaccgcaagtctcttgacaaa
ctcttccagggcttcaaaccagctgtggagtgctgctacttcaactgggaagtggcctac
cctttacctggcatcacctattgcaatgcagacaagaaaaatgcctcattttgttgggcc
aggatggtgcagcagcagaggggtgctaaagctgggaccagtggggaaccaggagaagga
gctcgctgtggaacgtcagaaggtacttcctctgaacacaagtcacggagcaactcccat
ctttcccagcaggaggtggctgtccgccctaaggagaccattgtgtgcaagaggaaagga
atggtttgtgtaggtggaagggtctctctcccgcttcaggagggaggtaaaggcaattat
aaagctagtagctcctccccatcagctggtagtaaggccaagcttacacagagcaacaag
ggttcgtgtggaagttcgagtggtgtcagcgggaagcaccccagcgctaaacggcgcact
agcagtgaggatagctctctagaacctgatatggcagagctgagtctggacgatggctcc
agcctggcacttggagcggaggcatcgaacacctttgacttccttcctcctccgccagag
atgctgccatcacccagccctcttctccgagagccactcaaatacagtggttctgcttca
aaagagcgtgcttttgagacaaaacgtgtgctgccctctgctgctgatgcccatgcctgc
tccatcgcagctccagtagtggcagctatggagaaagaggtggaagtggaggcagatctg
gatgagaacggaggagaagaagaccccgtagatgatactcggccctctgcaccgatcccc
agcaaggatcagcagggacgcagagagggagatgggagcggggcttcaggggcctcagga
cctcaagcagctgaggcagcaggagcagatgctgtgggtgaagatgactatcaagcttat
taccttagtgctgcatcagaagagggagctgatagaggggttgcagatggcaaccatgag
gaagagcctgacatctttgctgggattaaacctctggagcaggagggcaggatggagata
ctgtttgcctgtgcggaggctctctatgctcatggctatagtaatgaagcatgccgattg
gctgttgaacttgctcgagatctgctgtctaaccctcctgacttgaaggtggagcagccg
cagacaaagggtaaaaagagtaaagtgtcaaccactaaacagacgcaggtggccacttac
gccttgtctaaagtagccttcctgctgactgtgttgagtgagaggcttgagctccataac
ctggcattcaacactggcatgttctctctggagctccagagaccaccagcttctactaaa
gctctggaggtgaagctggcatatcaggagtcagaggtggtggccctgctgaagaagatt
cctctgggtcttgttgaaatgacttccataagggaccgagcagagcagctccgtgatgga
aacttctgtgactatcgaccggttttacctctcatgctggcaagcttcatatttgatgta
ctgtgcacccctgtggtctctcccacgggctctcgacctcctagccggaaccgtaacaat
gaaatgcctggtgatgaggaactgggatttgaggcagctgtagcagctcttggtatgaag
acaacagtcagtgaggcagagcatcctctgctatgtgaaggcacacggagagagaaagga
gacctggctctagcactgatgatcacttataaagatgaccaatcaaagcttaaaaagatt
ctggacaagctcctggatcgtgagagccagacccacaagccgcaaactctgagctcattt
tactcgagcaaaccagccaccagcagccaaaagagcccgtctaaacatgccacccatggt
gctagcggagccacgggaggagtgtcaaagcacaccacttcagcaacatcagctgctgtg
cagggcgtgactggagggggagccgcgggacagcagggcagtttggtggggggtggagtt
cagagcacggtgacaggagagggcatcgctgacaacagagatcaagagggtgcgcagtcg
acctcctgtgagcagcagagcgaagctgcgcccttcaagcccgagggcactgtgcccagt
cgtctggcactggggggccgtggggcgtacggcacacgctgctggggatcacctgtacgg
cagaaaaagaaacacaccggcatggcaagcattgacagcagtgctccagagaccacctca
gacagctctcctaccctcagtcgacgtccactgcgaggtggttggacagctgcttcctgg
gggagaggccaggacagtgacagcattagcagctcttcctctgattcacttggctcatcg
tcatctagcggctcacgcagagctggaggaggagccagagccaagagtactgacaccagc
aggtataaaggccgccggcctgaatgccacgctccacacgtgcccaaccagccatctgag
gcagcagcccatttttactttgagctggccaagactgtgttgattaaagctggtggaaac
agctccacctccattttcactcaaccctctgccagcggaggccatcaagggccccaccgc
aacctgcatctgtgtgcctttgaaattggcctgtatgccctcggcctgcataattttgtc
tctccaaactggctgtcaaggacatattcctcacatgtatcctggattacaggccaggct
atggagattgggagtgctgccctcaacatcctggtggaatgctgggatgggcacctcaca
cctccggaggtggcgtcactcgcagaccgtgcatcacgagcacgggatcccaatatggtg
cgtgctgcggcagagctagccttgagctgcttgcctcatgctcacgccctcaatcccaac
gagattcagagagccctggtgcagtgcaaggagcaggataatctgatgctggagaaggct
tgcatggcagttgaggaggctgcaaagggaggcggtgtttatccggaggtcttgtttgag
gtggctcaccagtggtattggctgtatgagcaaacagtgggtggaggctctggggcccag
cgagaggggtctggccgctgtggggccaatggtggagtcagaagaacgccacccgaggga
atctgtggtatcctggataacacgggtgtcttggactcttcaggtgtagcagctgtaact
acaacagtgactgcagccgctgtagttcctgtcatttctgtcggctccaccatctaccag
tcacacgcgctgccgggctcagccatggcacacacacaaggcctgcatccctacaccacc
atccaaacccatctgcccaccgtctgcaccccgcagtatttgggtcacccccttcagcac
gttccccgtcctgctgtcttccctgtgtctggggccgcctacccacaagtatatgactcg
aggaagacgtatcatccaggttttaagagcgtctgtttgtcttctcagggaatgcaccct
gcttttattggtgctcagtacccattttctgtggctactggccctcatcctccaatggca
gcgactgctgtcactttccctggagtcccagtgccgtccatgactcagatcgctgtccac
ccataccataccacagaggcagccctgcctcttagcactactgtggcaggaggaatacac
tcaggcgccaccatccaggccattcagggggcttctcttcctggactctcgccccagccc
gccccactggtcagcacacccttccctgtggaagacgagcagcacagtcagccagtcagc
cagcagggcctgcactacctccactcggcctacagagtcggcatgctggccttggagatg
ttgggaaggagggcccacaacgatcatccaaacaacttttcccgtagccccccgtacacc
gaagacgtcaagtggctgttgggcctggctgctcgtcttggtgtgaaccacgtgtaccag
ttttgcatgggggcagcgaaaggtgttcttagtccgtttgtccttcaggagatcattatg
gaggctctgcagaggttaaatcctgcacatatccacgcacacctccgcactcctgccttc
caccagctcgtgcagcgctgccagcaggcctacttacagtacatccaccataggctgatc
catctgactcctgccgactacgacgactttgtgaacatcatccgaagtgcccgcggggcg
ttttgcctgacaccagttggcatgatgcagttcaacgatgtgctgcagaacctgaagagg
ggcaaacagactaaagaactgtggcagcggatctcgttggagatggccactttctcaccc
tga

DBGET integrated database retrieval system