Carassius auratus (goldfish): 113057587
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Entry
113057587 CDS
T07313
Name
(RefSeq) CCR4-NOT transcription complex subunit 6-like isoform X1
KO
K12603
CCR4-NOT transcription complex subunit 6 [EC:
3.1.13.4
]
Organism
caua
Carassius auratus (goldfish)
Pathway
caua03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
113057587
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
caua03019
]
113057587
Enzymes [BR:
caua01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
113057587
Messenger RNA biogenesis [BR:
caua03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
113057587
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
113057587
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
LRR_4
LRR_8
LRR_14
LRR_1
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
113057587
NCBI-ProteinID:
XP_026080785
Ensembl:
ENSCARG00000052849
UniProt:
A0A6P6L8B9
LinkDB
All DBs
Position
39:complement(621226..628915)
Genome browser
AA seq
555 aa
AA seq
DB search
MPKEKYDPPDSRRMYTIMSSEEANSGKKSNWDGLEITGNVRSLSSSLWSLTHLTALHLSD
NSLSRIPPEITKLHNLVFLDLSSNKIRSLPAELGNMVSLRELLLNNNQLRVLPFELGKLF
QLQTLGLKGNPLTQEIMTLYQEPDGTRQLLNYLLDNLAGAIKRKPPPSRSWIVLQEPERT
RPTTLLTVMCYNVLCDKYATRQLYGYCPTWALNWSYRKKSIMQEILSCNADIISLQEVET
EQYYNYFLLELTKRGYDGFFSPKSRARTMSESDRKHVDGCAIFYKIEKFSMVQKHTVEFN
QLAMANSEGSEAMLNRVMTKDNIGVAVLLELKEELIESSSGKSTHAMEKQLLLVANAHMH
WDPEYSDVKLVQTMMFLSEVKNIIDKASCSLKLSSVSGETSSIPLVLCADLNSLPDSGVV
EYLSTGGVDCTHKDFKELRYSDSLTNFNCNGKNGTSNGRITHGFKLKSAYENVLMPYTNY
TFDFKGVIDYIFYSRPQLNVLGVLRPLDTNWLLENNISGCPHPHIPSDHFSLFAQLEWVL
PYTPLLNGVHLAGHR
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaagagaaatatgacccgcctgattccaggcgaatgtacacgatcatgtccagt
gaggaggcaaacagtgggaaaaaatccaactgggacggccttgaaataactggtaatgtt
cggagtctcagctcgagcctttggtcgctcactcacctcactgctctgcacctcagtgac
aactccctgtcacgcatcccacctgaaattaccaagctgcacaaccttgtgttcttggac
ctgtcatccaataagatcaggagcctgccagcagagcttggcaacatggtgtctctcagg
gaactacttttaaataacaaccagttgcgggttctgccgttcgaattggggaaactgttt
cagttacaaacactggggttgaaaggcaatccactcactcaagaaattatgactctctac
caggagccagatggtacccggcaactgctgaactaccttttggacaatcttgctggtgct
atcaagcgcaagccccctccgtccaggtcctggattgtgctgcaggagcctgaaaggaca
agaccaaccactctgttaactgtgatgtgctataatgtgctgtgtgataagtatgccaca
cgccagctctacggctactgccctacctgggcccttaactggagctacaggaaaaagtcc
attatgcaggagatcctcagttgcaatgcagatattatcagcttacaggaagtggagaca
gagcagtattacaactacttccttttggagctgactaaacggggatatgatggattcttc
agcccaaaatcccgggccagaaccatgtctgaatcggacaggaaacatgtagatggatgt
gcaatattctacaagattgaaaagttcagcatggtgcagaaacacacagtagagtttaac
cagctggctatggccaattcagagggctcagaggctatgctgaatcgtgtcatgaccaaa
gacaacattggagtggctgtgttgctggagctaaaggaggagttaatagagtcgtcatca
gggaaatctacccatgctatggagaaacagctccttctagtggcaaatgctcacatgcat
tgggacccagaatattctgatgtgaagctggtgcagaccatgatgttcctgtcagaggtg
aagaatatcatagacaaagcctcctgtagtctgaagctctcctccgtatctggagaaacc
agcagcatccctttggtgctttgtgccgacctcaactcacttcctgactcaggtgttgtg
gagtacctgagcacaggtggggtggactgcacacacaaagacttcaaggagctgcgctac
agtgacagtctgaccaacttcaactgcaacggcaaaaacggcacatctaacgggaggatc
acacatggtttcaagctgaagagtgcctatgagaacgtgcttatgccttacaccaattac
acttttgacttcaagggtgtcattgactacatcttctactccagaccacaactgaacgtg
ctgggtgtcctcaggcctttggacacaaactggctcctggagaacaatatcagtggttgc
ccacaccctcacatcccctcagatcacttctccctgtttgcacaactggagtgggtcctg
ccttatactccccttctcaatggagtccacttagctgggcacaggtag
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