KEGG   Carassius auratus (goldfish): 113057660
Entry
113057660         CDS       T07313                                 
Name
(RefSeq) WD40 repeat-containing protein SMU1
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
caua  Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:caua00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:caua03041]
    113057660
Spliceosome [BR:caua03041]
 Complex B
  Other components
   Complex B specific factors
    113057660
SSDB
Motif
Pfam: WD40 WD40_WDHD1_1st WD40_Prp19 Beta-prop_TEP1_2nd Beta-prop_EML_2 WD40_CDC20-Fz WDR55 WD40_MABP1-WDR62_2nd EIF3I Beta-prop_CAF1B_HIR1 ANAPC4_WD40 Beta-prop_EML Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st LisH_TPL NBCH_WD40 Beta-prop_RIG_2nd Beta-prop_Nup120_160 Beta-prop_TEP1_C Ge1_WD40 WDR90_beta-prop_4th Beta-prop_Vps41 WD40_MABP1-WDR62_1st Beta-prop_NWD2_C Beta-prop_DCAF4 Beta-prop_WDR19_1st Beta-prop_NUP159_NUP214 Beta-prop_HPS5 Beta-prop_SPT8 Beta-prop_IFT140_1st Beta-prop_IFT122_1st Beta-prop_WDR35_TULP_N Beta-prop_BBS7 Beta-prop_EIPR1 Beta-prop_SCAP WD40_RFWD3 Beta-prop_VPS8 Beta-prop_IP5PC_F Beta-prop_WDR75_2nd DUF7165 TFIIIC_delta Beta-prop_NOL10_N VPS8_N PROPPIN zf_topless PA14 LisH Beta-prop_IFT122_2nd TolB_like LisH_PAC1
Other DBs
NCBI-GeneID: 113057660
NCBI-ProteinID: XP_026080888
Ensembl: ENSCARG00000069435
UniProt: A0A6P6L8L2
LinkDB
Position
39:2568155..2573693
AA seq 513 aa
MSIEIESADVIRLIMQYLKENSLQRTLATLQEETTVSLNTVDSIESFVADINSGHWDTVL
QAIQSLKLPDKTLIDLYEQVVLELIELRELGAARSLLRQTDPMIMLKQTQPERYIHLENL
LARSYFDPREAYPDGSSKEKRRAAIAQALAGEVSVVPPSRLMALLGQSLKWQQHQGLLPP
GMTIDLFRGKAAVKDVEDERFPTQLARHIKFGQKSHVECSRFSPDGQYLVTGSVDGFIEV
WNFTTGKIRKDLKYQAQDNFMMMDDAVLCMSFSRDTEMLATGAQDGKIKVWKIQSGQCLR
RYERAHSKGVTCISFSKDSSQILSASFDQTIRIHGLKSGKSLKEFRGHSSFVNDATLTPD
GHHIISASSDGTVKVWNMKTTECTSTFKSLGTSAGTDITVNNVILLPKNPEHFVVCNRSN
TVVIMNMQGQIVRSFSSGKREGGDFVCCTLSPRGEWIYCVGEDFVLYCFSTVTGKLERTL
TVHEKDVIGIAHHPHQNLISTYSEDGLLKLWKP
NT seq 1542 nt   +upstreamnt  +downstreamnt
atgtctattgaaatagagtcagcagacgttattcgtctgatcatgcagtatctgaaggaa
aacagcttacaacgtactttagcaacgcttcaggaggagacgacagtgtctctcaacacg
gtggacagtattgagagttttgtggcagatattaacagcggtcactgggacactgtgctt
caggctatacagtccctcaaactccctgacaagaccctcattgatctttacgaacaggtt
gttcttgagctgattgagctccgagagctgggagcagccagatctttgttgaggcagact
gaccccatgatcatgctgaaacaaacccaacctgagcgatacatccacctggagaacctt
ctagcacgctcttactttgaccccagagaggcctatcctgatggcagcagtaaagagaag
cgtagagcagctatagctcaggctcttgctggtgaggtcagtgtggtaccaccatcacgt
ctgatggctctgcttggacagtctctgaagtggcagcagcatcagggtcttctgcccccc
ggtatgaccattgatttgttcagaggtaaagcagctgtaaaggacgtagaggatgagcga
ttccccactcagctggccagacacatcaagtttggtcagaagtctcacgtcgagtgttca
cgcttctctcccgatggccagtatctggttactggatctgtggatggatttattgaagtt
tggaactttactaccggaaaaatcagaaaggatctgaagtatcaggctcaggataacttc
atgatgatggatgacgcagtgctttgcatgtctttcagtcgggacacagagatgttggcc
acaggagcccaggatggcaagattaaggtgtggaagatccagagcggtcagtgtctgcgg
cgatacgagcgtgctcacagtaaaggcgtcacctgtatcagcttcagtaaagacagcagt
cagattctctctgcatccttcgatcagaccattaggattcacggattaaaatcaggcaag
tctctaaaggagttcagaggtcattcttcgtttgtgaatgatgccacacttactcccgac
ggtcatcacatcattagtgcctcatctgatggaactgtgaaggtctggaacatgaagacc
actgaatgcaccagcacattcaaatctttgggcacgtctgcgggaacagacattaccgtt
aacaatgtgatcctgcttcctaaaaaccctgagcatttcgtcgtgtgtaaccgatccaac
actgttgtcatcatgaacatgcagggccagattgtgaggagtttcagctctggtaagaga
gagggaggtgattttgtgtgctgcactctgtctccacgtggcgagtggatctactgtgtc
ggcgaggactttgtgctttactgtttcagcacagtcaccggcaaactagagagaaccctg
accgttcatgagaaggatgtcattggtattgctcatcacccacaccagaatttgatctcc
acgtacagtgaggatgggctcctcaaactctggaagccgtaa

DBGET integrated database retrieval system