Carassius auratus (goldfish): 113057663
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Entry
113057663 CDS
T07313
Name
(RefSeq) ATP-binding cassette sub-family A member 1-like
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
caua
Carassius auratus (goldfish)
Pathway
caua02010
ABC transporters
caua04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
113057663
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
113057663
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
caua02000
]
113057663
Transporters [BR:
caua02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
113057663
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DUF4162
AAA_23
Motif
Other DBs
NCBI-GeneID:
113057663
NCBI-ProteinID:
XP_026080894
Ensembl:
ENSCARG00000069753
UniProt:
A0A6P6L8Q2
LinkDB
All DBs
Position
39:2633620..2664054
Genome browser
AA seq
2282 aa
AA seq
DB search
MSISTQLGLLLWKNFTYRRRQTLQLLTEIVWPLFIFFILITVRLNYPPYEQHECHFPNKA
MPSAGTLPWIQGIVCNANNPCFRHPTPGESPGIVGNFNDSIISRLFSDAKKILLYSQNDK
SLDGFKELIGALKVMQNNTAGFKLKDFLHENETLSTFLQQNASFSHNYVQNVLDADVNLE
KVLIKGFGVHLRDMCSSTTLEDFVSISDKRVARFTQDLICSSPNSWLDQAERHFKSNLDF
LKPIRSNTRTNATDVRLVAKATDNLLESLGSLAVELASMRSWSDLRNEILFLTENATGSP
SLMYQAVSRIVCGHPEGGGLKIKSLNWYEDSNFQALFGSHNDSDDEPVSVYDNTTTPYCN
NFMKNMEASPISRMIWRALKPLLMGKILYTPHSPATQKIIHEVNKTFQELGILRDLGGMW
EEARPKVWNFMENSEEMDLMRTLLRNNATASFFSAQLAGTQWSVEDAISFLSKHSEDTRP
HGTAFTWRDIFNETDQAIMSISRFMECVNLDKLEPVSTEEKLVKESMGLLDNRKFWAGIV
FLDVQSNSSELPTHVNYKIRMDIDNVERTNKIKDGYWDPGPRADPFEDLRYIWGGFTYLQ
DVVEHGIIRAVTGTKEKTGVYIQQMPYPCYVDDIFLRIMSRSMPLFMTLAWMYSVAIIIK
GVVYEKEARLKETMRIMGLDNGILWFSWFISSLIPLLVSAGLLVLLLKMGNLLPYSDPGI
VFLFLGSFAVVTIMQCFLISTVFARANLAAACGGIIYFTLYLPYVLCVAWQDYVGFSAKI
IASLLSPVAFGFGCEYFALFEEQGVGIQWNNLFSSPVEEDNYNLTTCLILMYFDAFLYGV
MTWYIETVFPGQYGIPRPWYFPFTKSYWFGESNTNKTAVHGKKSNAGAVCTEEEPIHLEL
GVYIKNLVKVYRHGKKLAVDGLTLGFYEGQITSFLGHNGAGKTTTMSILTGLFPPTSGTA
YIMGKDIRSELSSIRRSLGVCPQHNVLFSMLTVEEHIWFYGRLKGLSEEEVKAETEQILT
DTGLPHKRKSRTSQLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYARRGIWDLLLKY
RAGRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLYLKTQLGTGYYLTLVKKNTEPS
LSSCRNSGSNVSFVKKDDNASENSSDAGLGSDQESEAATAIGTTWPESPVIPVDVALISS
LILKHVPAARMVEDLGHEITYVLPYESAKDGAFVELFHDLDDRLADLCISSYGVSDTTLE
EIFLKVAEDSGVDTEIISDGTVPVRRHRQHAFGVDHQSCLKPLTEDDNFDGNDSYGDPES
KETDYLSVSNGKGSYQVKGWSLKRQQFVALLWKRLLYARRSTKGFFAQIVLPAVFVCIAL
VFSLIVPPFGKYPSLALNPWMYEEQFTFISDDAPHDTSTQKLLNALLDDPGFGTRCMEGE
PIPDAPCTMGDEEWSSPEVAESMMDIFTSKNWTMDNPSPACECSCNGKKKMLPECPAGAG
GLPPPQIKISEIETLQNLTGRNISDYLVKTYAQIIGKSLKNKIWVNEFRYGGFSLGARST
QVLPPAEEIDDAISRVRDIFQLGKDSGSATDRFLKSLSAFINGLDTKNNVKIWFNNKGWH
SIGAFLNVMNNGIFRASLPPGKDPRQFGITTFNHPLNLTKEQLSQVALMTTSVDVLVSIC
VIFAMSFVPASFVVFLIQERVNKAKHMQFISGVQPLLYWLANFLWDMCNYVVPATLVIVI
FVCFQQKAYVSTSNLPVLALLLLLYGWSITPLMYPASFLFKIPSTAYVVLTSVNILIGIN
GSVATFVMELFGNNEIGGINDILKNVLLIFPHFCLGRGLIDMVKNQAMADALERFGENSF
RSPLEWDMVGKNLFAMAVEGVVFFIITVLIQYRFFFEAKSLRAKLSPIGEEDEDVARERQ
RIMSGAGQGDILELRQLTKVYKRKQKPAVDRLCVGIPPGECFGLLGVNGAGKTSTFKMLT
GDSVVTKGEAFLAGKSILREIDEVHQNMGYCPQFDAINDLLTGREHLEFYAILRGVPEKE
VCEVAEWGINKLGLVKYMDKKAGSYSGGNMRKLSTAISLIGAPPVVFLDEPTTGMDPKAR
RALWNCIHSVIKEGRSVLLTSHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYT
IILRVAGPNPDLQPVMKFIESELPGSTLKEKHRNMLQYQLPSSLTSLAHIFSILAKNKEF
LRIEDYSVSQTTLDQVFVNFAKDQSDDHSESSIRRKETAVNMALLSPLSIKGNTEKPMES
FV
NT seq
6849 nt
NT seq
+upstream
nt +downstream
nt
atgtctatctccactcagctgggtctgctgctgtggaagaacttcacctacagaaggaga
caaacgctccaactgctgacggagattgtgtggcctctctttattttcttcatcctgatc
actgtgaggttgaactacccgccttatgagcaacatgaatgtcactttcccaacaaagcc
atgccctcagcaggcaccctgccctggatccagggcatcgtctgcaatgccaacaatccc
tgcttccgacacccaacccctggggaatctccaggaatcgttggaaactttaatgattcc
ataatctcacgtctgttttctgatgccaagaaaatcttactgtacagtcaaaatgacaaa
agcttagacggattcaaggagctaatcggtgcactaaaagtcatgcaaaataacacagct
ggtttcaagctgaaggacttcctgcatgaaaatgaaaccctttctacgttcctccaacaa
aacgcctccttttcccataattatgtacagaatgtgctggacgcggatgtaaatcttgaa
aaggtgctgatcaaaggttttggcgtccatctgagggacatgtgcagctccaccacactt
gaggattttgtgagcatatcagacaaaagggtggcaagattcacccaggaccttatctgc
agctctcccaatagctggctagaccaggccgagagacacttcaagtccaacttggatttc
ctcaaacctattaggtcaaacacaaggactaatgccactgatgtccgtctagttgccaaa
gccacagacaaccttctggagagcctgggatcactggctgtggagctggccagtatgagg
agctggagtgacctgcgaaacgaaatcttgtttctgacagaaaatgccacgggctcaccg
agtctgatgtaccaggctgtgtcccgaatcgtgtgtggacatccagaaggcggcggcctc
aagatcaaatccctcaactggtacgaggacagcaacttccaggcactgttcggcagccac
aacgacagtgatgacgaacccgtttcagtctatgacaacaccaccactccgtactgtaac
aacttcatgaagaacatggaagccagtcccatctctcgaatgatctggagagcattgaaa
cctctcctgatggggaagatcctctacacgccacacagccctgcaacacagaagatcatt
catgaggtcaacaagacgtttcaggagctcggaattctacgagatttaggaggaatgtgg
gaagaagccagaccgaaggtttggaatttcatggagaacagtgaagaaatggatctgatg
cggacgcttcttcgaaacaatgccactgctagttttttcagtgcccagttggctgggact
cagtggagcgtggaggatgctataagcttcttgtccaagcactccgaggacacgcgtccc
catggaacagcatttacatggcgggacatcttcaatgagacggaccaggccataatgagc
atatcccgtttcatggagtgtgtaaacctggataaacttgaacctgttagcacagaggaa
aagctggtgaaagagtccatgggcctcctggataacagaaagttttgggcgggaattgtg
tttctggacgttcagtccaacagctctgaacttcccacgcatgtcaattacaagatccgc
atggacattgacaacgtggagcgcacaaacaagattaaagatgggtattgggatcccggt
cccagggctgatccgtttgaggatttgcggtatatttggggaggatttacttaccttcag
gatgtagttgaacacggcatcatcagagcggttaccgggaccaaagagaagaccggtgtt
tacatccaacagatgccttatccatgttacgtagatgatattttccttcgcattatgagc
cgttccatgccgcttttcatgactctggcctggatgtactcggtggccatcatcatcaaa
ggtgttgtctatgaaaaggaggcccggctaaaagagaccatgaggattatgggattggac
aatggaatcctgtggttcagctggttcattagcagcctcatccctcttctcgtcagcgca
gggctgctggttctgctactcaagatgggtaatctcctgccctatagtgaccccggcata
gttttcctcttcctcgggtcattcgccgtggtcaccatcatgcagtgtttcctgatcagt
acagtgtttgcacgtgccaacctggcagcggcttgtgggggcattatctactttaccctc
tacttgccttatgtgctctgtgtggcttggcaagactacgtgggcttcagcgccaaaatc
attgctagcttactgtctccagtggcgtttggatttggctgtgagtattttgccttgttt
gaggagcaaggtgtgggcatccaatggaataacctcttctctagccccgtggaagaagac
aactataacctcaccacctgcctcatccttatgtactttgatgccttcctgtatggggtc
atgacgtggtacattgagaccgtgttcccggggcagtatggcattcccaggccatggtac
ttccctttcactaaatcctactggtttggagagagcaacacaaacaaaactgcagttcat
ggaaagaagagcaatgctggggccgtatgcactgaagaggaacccattcaccttgaattg
ggagtttacattaagaatcttgtgaaggtctaccgtcatggcaaaaaactagcagtcgat
gggttgacacttggattctatgaggggcaaataacttctttcctaggtcacaatggagct
ggaaaaaccaccaccatgtctatcctaacgggccttttccctcccacttctggcactgca
tatataatgggcaaagatattcgctcagagctcagttcgatcagacggagccttggagtg
tgtccacaacacaacgtgctattcagcatgttgacagtagaagagcacatctggttctac
ggccgtctgaagggtctgtctgaggaggaagtgaaggctgagacagagcagattctgacc
gataccggccttccacacaaacgcaaatccaggaccagccaactgtccggtggtatgcag
aggaaactctcggtagcccttgcttttgttggagggtcaaaggttgttattctggacgag
cccaccgctggtgtggacccatacgctagaagaggcatctgggatcttcttctgaagtat
cgtgcaggtcggactatcattctttccacccatcatatggatgaagcagatattctgggt
gatcgtattgctatcatctcccatggaaagctttgttgtgtgggatcttcgctctatctt
aaaactcaactgggaactggatactatcttaccttggtgaagaaaaacactgagccttct
ctcagttcttgcaggaactcaggcagcaatgtgtcctttgttaaaaaagatgacaatgcg
tccgagaacagttcggatgctggtctaggaagcgaccaagagagcgaagccgccacagcg
attggaactacatggcccgaatctcccgttattcctgtcgatgtagccctcatctccagt
ctaatcctgaagcatgttcccgctgcccgcatggtggaagaccttggtcatgagatcaca
tatgtgttgccgtacgagtctgccaaagatggtgcattcgttgagctcttccatgacctg
gatgatcgcctcgctgacctctgcatttcaagctatggcgtctcagatactacacttgaa
gagatattccttaaagtggcagaggacagtggagttgacacagaaatcatttctgatgga
actgtaccagtgcgcagacatagacagcacgcatttggtgttgaccaccagagctgcctc
aaacccctaactgaagatgataactttgacggcaacgactcttacggtgatccagaatcg
aaagagacagactatttgagcgtttccaatggcaaaggatcatatcaggttaaaggctgg
agtttgaagaggcaacagtttgtggctttgttgtggaagagattgctgtatgctcggcgc
tcaacgaaaggcttctttgcacagattgttcttcccgctgtgtttgtgtgcatcgcactg
gtgttcagtcttattgtgccgccattcggaaaatatcccagcctggctcttaatccatgg
atgtatgaagaacagtttacgttcatcagtgatgatgctccacatgatacaagcacacaa
aaattactcaatgctttgttagatgatcctggctttggaacacgatgcatggaaggagaa
ccaattcctgatgctccctgtacaatgggcgatgaggaatggtctagtccagaagtggca
gaaagtatgatggacattttcacatcaaaaaactggaccatggacaacccatcgcccgct
tgtgagtgcagctgtaatggcaaaaagaagatgctcccagaatgccctgctggtgcaggt
ggattgccacctcctcagattaagatcagtgagattgagaccctccagaacctgacggga
cgaaacatctcagactatctagtgaagacctatgcacagatcattgggaaaagcttaaag
aacaagatatgggtgaatgaattcagatatggaggattttcattgggcgctagaagcact
caggtacttcctcctgctgaggagattgatgatgccatctccagagtcagggacatcttc
caactggggaaggactccggatcagcgaccgaccgtttcttgaaaagcctgtctgccttc
atcaatggactggacaccaagaacaatgtcaagatatggtttaataacaagggctggcac
agtattggagctttcctcaatgtaatgaacaatggtatctttcgtgccagcttaccacct
ggcaaagacccgcgtcagtttggcatcactacattcaaccatccactcaatctgaccaag
gaacagctttctcaagtggccctaatgactacctcagtggatgtgctggtttccatctgt
gtgatcttcgccatgtcctttgtccccgccagctttgttgtctttctcattcaggagcga
gtcaataaggccaagcacatgcagtttatcagtggagttcagccattgctctactggctg
gccaactttctctgggatatgtgcaattatgtcgtccctgctactctggtgatcgtgatc
tttgtgtgctttcaacaaaaagcctacgtctccaccagcaacctgcctgttcttgccctt
ctactgcttctttatggatggtccatcactcctcttatgtacccagcttcattcctcttc
aaaatccctagcactgcttatgtggttctcactagcgtcaacatcctcattgggatcaac
ggcagcgtggccacttttgtcatggagttatttggaaataatgagatcggtggcattaat
gacatcctgaagaacgttttgctcatctttccacatttctgccttggccgaggtctcatc
gacatggtgaagaatcaggccatggctgacgctctggagagatttggtgaaaacagtttc
cgttctccattggagtgggacatggtgggcaagaatctttttgccatggctgtggaagga
gtggttttcttcatcatcacagtccttatccagtatcgtttcttctttgaagccaagtct
ttaagagccaagttgagtccgattggagaggaggatgaggatgtggccagagagaggcag
agaatcatgagtggagctggacagggagacattcttgaactccgacaactcactaaggtg
tacaagcggaaacagaagcctgctgttgatcgtctatgtgttggtattcctccaggagag
tgctttggtctgcttggtgtaaatggagctggaaagaccagtacttttaaaatgctgacc
ggagactctgtggtcaccaaaggagaagcattcttggctgggaaaagtatactcagagaa
atagatgaagtacatcagaacatgggctactgccctcagtttgatgccatcaacgatctg
ctgacaggacgggaacacctggaattctacgccatcctgcgtggtgtacctgagaaggaa
gtttgtgaggtggcagagtggggaatcaataaactgggcctcgtaaagtacatggacaag
aaagcaggaagctacagcggtggcaacatgcgcaaactctccaccgccatatcactcatt
ggagccccaccagtggtcttcctggacgagcccaccactggaatggaccccaaagcacgc
cgagcactgtggaactgcatccacagtgtcatcaaagagggacgctctgtcctacttacc
tcacacagcatggaagaatgtgaagcgctgtgcaccaggatggccatcatggtgaacggc
aggttccgctgtctgggcagcgtccagcacctgaagaacagatttggagatgggtacacc
attattctgagggttgcgggcccaaatcctgacctgcagccggtgatgaagttcattgag
agcgagctgccgggaagcaccctgaaagaaaaacaccgaaacatgctgcaataccagctc
ccctcctccctcacctccctcgctcacatcttcagcatcctcgctaagaacaaagagttt
ctcaggatagaggactactccgtgtcccagaccactctggaccaggtatttgttaacttt
gccaaggaccaaagtgacgaccactcagagagctccattcgtcgtaaagagaccgcggtc
aacatggccctcctgagccctctctctattaaagggaacacggagaagccaatggaaagc
tttgtgtga
DBGET
integrated database retrieval system
