Carassius auratus (goldfish): 113057680
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Entry
113057680 CDS
T07313
Name
(RefSeq) histidine--tRNA ligase, cytoplasmic-like isoform X1
KO
K01892
histidyl-tRNA synthetase [EC:
6.1.1.21
]
Organism
caua
Carassius auratus (goldfish)
Pathway
caua00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
113057680
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
caua01007
]
113057680
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
caua03016
]
113057680
Enzymes [BR:
caua01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.21 histidine---tRNA ligase
113057680
Amino acid related enzymes [BR:
caua01007
]
Aminoacyl-tRNA synthetase
Class II (A)
113057680
Transfer RNA biogenesis [BR:
caua03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
113057680
Prokaryotic type
113057680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_His
HGTP_anticodon
WHEP-TRS
HGTP_anticodon2
tRNA-synt_2
tRNA-synt_2d
XH
Motif
Other DBs
NCBI-GeneID:
113057680
NCBI-ProteinID:
XP_026080926
Ensembl:
ENSCARG00000006383
UniProt:
A0A6P6LCC1
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All DBs
Position
39:3000515..3008793
Genome browser
AA seq
515 aa
AA seq
DB search
MADKVQLQEAIKTQGEVVRKLKSEKASKEQIDEEVARLLQLKAQLGGDEGKHVFVLKTAK
GTRDYNPKQMAIREKVFNIIISCFKRHGAETIDTPVFELKETLTGKYGEDSKLIYDLKDQ
GGELLSLRYDLTVPFARYLAMNKITNIKRYHIAKVYRRDNPAMTRGRYREFYQCDFDIAG
QYDAMIPDAECLKIVYEILNELDLGDFRIKVNDRRILDGLFAVCGVPDEKFRTICSTVDK
LDKMAWEDVKKEMVNEKGLSADVADRIGEYVSMQGGQDLAERLLQDPRLSQSKQACAGLT
DMKLLFSYLELFQVTDKVVFDLSLARGLDYYTGVIYEAILSQTIQAPVSMPAEQNGADEA
GVSVGSVAGGGRYDGLVGMFDPKGRKVPCVGVSIGIERIFSIMEQKAEASSEKVCTTETQ
VLVASAQKNLLEERLRLTNELWNAGIKAEVLYKKNPKLLSQLQHCEETGIPLVAILGEQE
LKDGVVKLRNVARREEVDVPRVDLVDEIKKRTLLS
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atggccgataaagtacagctacaggaggcgattaaaacacaaggagaggtcgtcaggaaa
ctgaaatcagagaaagcgagtaaagaacagattgatgaagaagtggccagactgttgcag
ctcaaagctcagcttggaggagatgagggaaaacatgtgtttgttctcaaaacagccaag
gggaccagggactataaccccaagcagatggctatcagagaaaaggttttcaacatcatc
atcagctgctttaaacgtcatggtgctgaaaccatcgatacccccgtctttgagctgaag
gaaacattgacagggaagtacggtgaagactccaagctcatctacgatctgaaggaccag
ggaggagaacttctgtctctgagatatgacctcactgtcccatttgctcgctatcttgca
atgaataaaatcaccaacattaagcgctaccacattgctaaagtgtaccgcagagacaac
ccagccatgacccggggccgttacagggagttctaccagtgtgatttcgatattgcaggt
cagtacgatgccatgatccctgatgccgagtgtctgaagattgtctacgagatcctgaac
gaattagatctaggagattttcgtattaaggtgaatgaccgacgcattctagatggattg
tttgctgtgtgcggcgttcctgacgagaagttccgcacgatctgctccacagtggacaaa
ctggacaagatggcctgggaggatgtaaaaaaggagatggtgaatgagaaagggctttca
gcggatgtggctgatcggatcggggagtatgtcagcatgcaaggaggacaggatctggcc
gagcggctgcttcaggaccccagactgtcccagagcaagcaggcctgcgctggactcacc
gatatgaagctgctctttagctacctggagctcttccaggtcacagacaaggtggtgttt
gatttgagtctggctcgaggactggactactacactggtgtgatttatgaagcgattctc
tcccagaccatccaggcaccggtgtccatgcctgcagagcagaacggggcagatgaagct
ggcgtaagcgttggcagtgtggccggtggagggcgatatgatggtctggtgggcatgttt
gaccccaagggcaggaaagtgccctgtgtgggcgtcagcattgggattgagaggatcttt
tccatcatggagcagaaggccgaggcatcttcagagaaggtgtgcaccactgaaactcaa
gtactggtggcctcggcacagaagaaccttctagaagagcgacttagactgaccaatgag
ctttggaatgccggaatcaaggctgaagttttatataagaaaaacccaaagctgttgagt
caactgcagcactgtgaggaaactgggattccactggtggccattttaggagaacaagaa
ctcaaagacggagttgtcaaactgcgcaacgtagccagacgagaagaggttgatgtgccc
agagtggatctggtggatgagatcaagaaacggaccttgttgtcttaa
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