Carassius auratus (goldfish): 113057807
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Entry
113057807 CDS
T07313
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
caua
Carassius auratus (goldfish)
Pathway
caua04120
Ubiquitin mediated proteolysis
caua04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
113057807
04120 Ubiquitin mediated proteolysis
113057807
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
caua04121
]
113057807
Enzymes [BR:
caua01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
113057807
Ubiquitin system [BR:
caua04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
113057807
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_16
zf-RING_11
zf-RING_5
zf-RING-like
zf-ANAPC11
zf-HC5HC2H
FANCL_C
zf-Nse
Motif
Other DBs
NCBI-GeneID:
113057807
NCBI-ProteinID:
XP_026081113
Ensembl:
ENSCARG00000055876
UniProt:
A0A6P6L9C6
LinkDB
All DBs
Position
39:6799917..6806176
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AA seq
619 aa
AA seq
DB search
MVRAALVTATSLVLTGAVVAHAYFLKVQFYPTVVYLTKSSPSMAVIYIQAFVLVFLLGKL
MRKVFFGQLRAAEMEHLIERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLA
EDRVDFMERSPNISWVFHFRVLSLMVLLGVLDFLFVNHACHSIITRGASVQLVFGFEYAI
LMTMVLTTFIKYTLHTVDLQSENPWDNKAVYMLYTELFTGFIKVILYMAFMTIMIKVHTF
PLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEDLQATDNVCIICREEMVT
GAKKLPCNHIFHSSCLRSWFQRQQTCPTCRMDVLRASQPNQTPAPAPAQAPVPAAPANAP
VPPPVNVAPGMMPQFPPGLFPFWGPLPGAPPPPAAPGAQAATDAPQTSAAATPAQGAESG
ASSSTQPNADSASAAPGAMPGFPFSMPPPFPSAPWLPMPPPPPFMSSMPPPPSTLSTMSE
AELRELEQEGRRGLEARLQCLHNIHTLLDAAMLNIHHYLSTVATLSPPRSETNAGETSTS
ANVESSSSTGNTETPSQENEAQSDGSVNGATGFSPPDSTTGVDKDRKEGDEDEDESEPNA
AELRRRRLRKLETTNTPDH
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atggtgcgagccgctctggtgacagccaccagtttggtgctgactggtgcagtggtggct
catgcgtacttcctcaaggtccagttctaccccactgtggtgtacctcactaagagcagt
cctagcatggcagttatatacattcaggctttcgttttggttttccttttggggaaatta
atgcggaaggtgtttttcgggcaactgagagctgctgagatggagcacctgattgaacgc
tcctggtacgccgtgaccgagacctgtttggcctttacagtcttcagggatgatttctct
cctcgctttgtggccctcttcactctgttgcttttcctcaagtgtttccactggctggct
gaagacagggtggactttatggaaaggagtcccaatatctcatgggtcttccacttcaga
gttctctccctgatggtgctgctgggagtgttggactttctgtttgtcaatcatgcgtgt
cacagcattataaccagaggagcgtcagtgcagctggtttttggatttgagtatgcgatt
ctgatgactatggtcctcaccaccttcatcaagtacaccttgcacacagttgatctgcag
agtgagaatccgtgggacaacaaggccgtctacatgctctacacagagctcttcacaggt
ttcatcaaggtgattttgtatatggcgttcatgaccataatgataaaggtgcacaccttc
cctctgtttgccatccgacccatgtatctcgcaatgaggcaattcaagaaggcagtaaca
gacgccatcatgtctcgacgagccattcgtaatatgaatactctctatccagatgccacc
cctgaagacttgcaagccactgataatgtgtgcatcatttgcagagaagagatggtgacc
ggagccaagaaactgccgtgcaaccacatctttcactcaagttgccttcgctcctggttc
cagagacagcagacgtgtccgacgtgtcgtatggatgtcctccgagcgtcccagccgaac
cagactcctgccccagctcccgcacaagcacctgtccctgctgctcctgctaatgccccc
gtgcctccacctgtcaatgttgctccaggaatgatgcctcagtttcctccgggtctgttt
ccattttggggtcccttaccaggcgcgcctcctcctcctgctgctccgggagcacaggca
gctactgacgcaccacagaccagcgccgctgcaacaccggcacagggagcagaatcagga
gccagcagctcgacccagccgaatgcagacagcgcctctgctgctcccggagcaatgcct
ggattccccttctccatgcctccacctttcccatcagctccatggctcccgatgcctcca
cctccacccttcatgtcatccatgccaccgcctccgtcgactctgtccaccatgtccgag
gccgagctcagggagctggagcaggagggcaggcgaggtttggaagccaggttgcagtgc
cttcacaacatccacacattactggatgccgccatgctcaacattcatcactacctcagc
acggtggccacattaagtcctccaagatcagaaaccaacgctggtgagacgagtacatca
gcgaatgtggagtcctcttcctccacgggcaacaccgaaactcccagtcaggagaacgag
gctcagagcgatggatctgtaaatggagcgacaggcttttctccaccagactcaaccaca
ggtgtggacaaagacaggaaggagggcgatgaagacgaggatgaaagcgagccaaatgcc
gccgagttgagacgacgtcgtctgcgtaaactggagaccactaatactcctgaccactga
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