Carassius auratus (goldfish): 113057883
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Entry
113057883 CDS
T07313
Name
(RefSeq) regulator of nonsense transcripts 3B-like
KO
K14328
regulator of nonsense transcripts 3
Organism
caua
Carassius auratus (goldfish)
Pathway
caua03013
Nucleocytoplasmic transport
caua03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
113057883
03015 mRNA surveillance pathway
113057883
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
caua03019
]
113057883
Messenger RNA biogenesis [BR:
caua03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
113057883
mRNA cycle factors
P-body specific factors
113057883
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smg4_UPF3
Motif
Other DBs
NCBI-GeneID:
113057883
NCBI-ProteinID:
XP_026081232
Ensembl:
ENSCARG00000015026
UniProt:
A0A6P6LC28
LinkDB
All DBs
Position
39:10798153..10803056
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AA seq
461 aa
AA seq
DB search
MKEDKENTRPREKKVEIKCDENEKPNKEKKEALTKIVIRRLPPSLTKEDLVEQLQPLPEL
DYLEFFSSDTSLFPHLFSRAYLNFKNQDDVVLFRDRFDGYVFIDSRGQEYPAIVEFAPFQ
KTAKKRSKKKDAKSGTIEDDADYKKFLESYNGDEEKFPSNPETLLEEIEAKTKELSAKKT
TPLLDFLKNKQRIREEKKEERRRRELERKRLRDEERRKWREEDRRKRKEAEKLKKGEKAS
DKDKDQPKDEQPKIKLLKKTEKADDVDTEKPKDKAKKQDREKQREDRPPGGGETKKRQNG
EHREEKGGKSEDSGHKNYRDRDGDRERERDRERERRQKDKERIRRQDEERRKRERQDREN
TYRKRDEEGKKDKERVWEKRKNENTGESSVSAHPEKPSRDSRKEDSAKRDRLRNKDRPTI
QLYQPGARSRNRGGGGTGGDGQGEEKRAERETKNTQEKAAE
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaggataaggaaaacacgcgtcccagagaaaagaaagtggaaataaaatgtgat
gaaaatgaaaagccaaataaagagaagaaggaggctttgacaaagattgtgatccggcgt
ctccctccaagtctgactaaagaagatttagtggaacaactgcagcctcttccagagctg
gattacctggagtttttctctagtgatactagtcttttccctcatctgttttcaagagcg
tatctgaatttcaaaaatcaagatgacgtagttctcttcagggaccggttcgatggctat
gtcttcattgatagtcgaggtcaagaatatccagcaattgttgagtttgcgccattccag
aaaactgctaagaaaagaagcaagaagaaagatgccaaaagtggaacaattgaagatgat
gctgattacaaaaagtttttggagtcctacaatggtgatgaggaaaaatttccttccaac
cctgagactttgcttgaggaaatagaggccaagaccaaggaacttagtgctaaaaaaacg
acacctctcttggacttcctaaagaataaacagaggattagagaagaaaagaaagaagag
aggagacggagagaactagaacgtaaacgcctgcgagatgaagaaaggcgtaagtggaga
gaggaggacagaagaaaaagaaaagaggctgagaaattaaaaaaaggagaaaaggcatct
gataaggataaggaccaacctaaagatgaacagccaaaaattaagctcttgaaaaaaaca
gagaaagcagatgatgttgatactgagaagccaaaggacaaggccaagaaacaagaccga
gagaaacaaagggaagatcgacctcctggaggaggagaaacaaagaagcggcagaatggt
gaacacagagaggagaaagggggaaagtcagaggatagtgggcataaaaattacagagat
cgcgatggagaccgagagcgggagcgggacagagagagagagcgaagacagaaagacaaa
gaacgtatcagaaggcaggatgaagaacggaggaaaagggaacgtcaggatagagaaaac
acctacagaaagagagacgaggaggggaagaaggacaaggagcgtgtttgggagaaaagg
aagaatgaaaacaccggagagtcctccgttagtgctcatcctgaaaagccttcaagggac
agcagaaaagaagacagtgccaaaagagaccgtctgagaaataaggatcggcctacaatt
cagctgtaccagcccggggcgaggagccgtaaccggggcggaggaggaacaggaggagat
ggacagggagaggagaagagagctgagcgggagaccaagaacactcaagagaaagctgct
gagtga
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