Carassius auratus (goldfish): 113057900
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Entry
113057900 CDS
T07313
Name
(RefSeq) cullin-4B-like
KO
K10609
cullin 4
Organism
caua
Carassius auratus (goldfish)
Pathway
caua03420
Nucleotide excision repair
caua04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
113057900
09124 Replication and repair
03420 Nucleotide excision repair
113057900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
caua04121
]
113057900
03400 DNA repair and recombination proteins [BR:
caua03400
]
113057900
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
caua04147
]
113057900
Ubiquitin system [BR:
caua04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Cullin
113057900
DNA repair and recombination proteins [BR:
caua03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
113057900
TCR (transcription coupled repair) factors
Cul4-CSA complex
113057900
Exosome [BR:
caua04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
113057900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
SecA_SW
NurA
DUF3292
Motif
Other DBs
NCBI-GeneID:
113057900
NCBI-ProteinID:
XP_026081266
Ensembl:
ENSCARG00000006568
UniProt:
A0A6P6LD66
LinkDB
All DBs
Position
39:10931408..10957314
Genome browser
AA seq
866 aa
AA seq
DB search
MFPTGLPSPNPPPPTQEPRPAASDVHNDSNVSLTASKKRKTNSSEKEDIDSISSSPKAIC
NSSSTTSSSSSPLQQQQQQHIQKKLRFEDPLDLIGLDVKMAEESCNSAESCSKARNVFLS
GGVGHHANGLTKSAGSATFSNSKPGAAKKLVIKNFKEKPKLPENYTNETWQKLKEAVEAI
QNSTSIKYNLEELYQAVENLCSHKISAKLYKQLRVVCEDHIKAQIDQFREDALDSVLFLK
KIDKCWQDHCRQMIMIRSIFLFLDRTYVLQNSMLPSIWDMGLELFRFYIISDLKVQCKTI
DGILLLIERERSGEAVDRSLLRSLLSMLSDLQIYQDSFEDRFLEETNRLYAAEGQRLMQE
REVPEYLHHVNKRLEEEADRVITYLDQSTQKRLIAKVENQLLGEHLPAILQKGLNNLLDE
NRIQDLSLLYQLFSRVKGGVQVLLQHWIEYIKAFGSTIVINPEKDKTMVQELLDFKDKVD
HIIDVCFMRNEKFVNGMKEAFETYINKRPNKPAELIAKHVDSKLRAGNKEATDEELEKML
DKIMIIFRFIYGKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEG
MFKDMELSKDIMVQFKQHMQCQNIPGNIELTVNILTMGYWPTYVPMEVHLPPEMVRFQEI
FKTFYLGKHSGRKLQWQSTLGHCVLKAEFKEGKKELQVSLFQTLVLLMFNEAEEFSLEDI
KLATGIEDGELRRTLQSLACGKARVLTKTPKSKDVEDGDKFSCNDDFKHKLFRIKINQIQ
MKETVEEQASTTERVFQDRQYQIDAAIVRIMKMRKTLSHNLLVSEVYNQLKFPVKPADLK
KRIESLIDRDYMERDKDNPNQYNYVA
NT seq
2601 nt
NT seq
+upstream
nt +downstream
nt
atgtttccaacaggtttaccttcccctaatcccccaccgccaacccaagagcccagaccg
gcagcttctgatgttcacaacgacagtaacgttagcttaacggcttctaagaagaggaaa
actaacagctccgagaaggaagacattgattcaatatcttcgtctcctaaagccatttgt
aattcctcctccacaacgtccagctcttccagtccactgcagcagcagcagcagcagcac
atccagaagaagttgaggttcgaggacccgctggatttgatcggactggatgtgaagatg
gccgaggagtcatgtaactctgcagaatcgtgttcaaaggcgagaaatgtgttcctgtcc
ggaggtgtcgggcatcatgctaacggactgaccaagtctgcaggctccgccaccttctcc
aacagcaaacccggtgctgcgaagaaacttgttatcaagaactttaaagaaaagcccaaa
ttaccggagaattacacgaatgagacctggcagaagctgaaggaggcagtagaggccata
cagaacagcacttcaataaagtacaacctagaagagctctatcaggctgttgaaaatttg
tgctcccataagatatctgccaagctctataaacagctccgagtggtctgtgaagaccat
atcaaggctcagattgaccagttcagagaggatgccttagacagtgttctgttcctcaag
aaaatagacaaatgttggcaagatcactgcagacaaatgatcatgattaggagtatattt
ttgtttttggatcgcacatatgttttacaaaattcaatgctgccatcaatctgggacatg
ggcttggagttgtttcgtttctatatcatcagcgacctgaaggtgcagtgtaagacaatc
gatgggattctgcttcttattgagagagagcggagtggagaggctgtagaccgcagtctc
ctgaggagtcttctgagcatgctctcagatctgcagatttatcaggattcattcgaagat
cgctttctggaggagacaaatcgactttatgctgcagagggccagagactcatgcaagaa
agagaggtgccagagtatctccatcatgtcaacaaacgtctggaagaggaggcagatcga
gtcattacatacctagaccagagcacacaaaaacgtctcattgccaaagtagaaaatcag
ctgcttggagaacacctccctgcaatacttcagaaaggtttgaataacctgctggatgag
aaccgtattcaggatctgtctctactgtaccagctcttcagtcgtgtgaagggaggcgtg
caggtgcttctccagcactggatcgagtacatcaaggcctttggaagcacaattgtcatc
aacccagagaaagacaagacaatggtccaggagcttttggatttcaaggataaagtcgat
cacatcattgatgtgtgtttcatgaggaatgagaagtttgttaatggcatgaaggaggcc
ttcgagacctacatcaataaacggccgaacaaacctgcagagctcatagcaaaacatgtg
gattcaaagctccgtgctgggaacaaagaagcgactgatgaggaactcgagaaaatgttg
gacaagataatgatcatcttcaggttcatttatggcaaagatgtttttgaggccttctac
aagaaagacttggcgaagaggttactagtcggaaagagtgcctctgtagatgctgagaaa
tcaatgctgtcgaaactgaagcatgaatgtggcgctgcatttaccagtaagttggaagga
atgttcaaagacatggagctgtcaaaagatattatggtgcagttcaaacagcacatgcaa
tgccaaaatattcctgggaacattgagttgacggtgaacatcctcactatgggttattgg
ccaacatacgtccccatggaagtacatctgcctccagagatggtaagatttcaagagatt
ttcaaaacgttttacctgggcaaacacagtggacggaaactacagtggcagtcgacgtta
ggacattgcgttttaaaagcagaattcaaagagggcaaaaaagagctgcaggtttccctg
tttcagacgttagtcctgctgatgtttaatgaagcagaggagttctctctggaggatatt
aaattggctacaggcattgaggacggtgagttgaggcggactctgcagtcgctggcctgt
gggaaggcgcgtgtccttaccaaaaccccaaagagtaaagacgtggaggacggagacaag
ttctcttgtaatgatgatttcaaacacaaactcttcaggattaaaatcaaccagatccag
atgaaagaaacggtggaggagcaagccagcactacagagagagtcttccaggatcgtcag
taccaaatcgatgctgcaattgttcgaatcatgaagatgaggaaaactctcagccataat
cttctggtgtctgaggtgtacaaccaacttaaattcccagtcaagcctgctgatctgaag
aagaggatagagtcacttattgacagggactacatggaaagggataaggacaatcccaat
caatacaactatgttgcttag
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