KEGG   Carassius auratus (goldfish): 113057927
Entry
113057927         CDS       T07313                                 
Name
(RefSeq) CCR4-NOT transcription complex subunit 7-like isoform X1
  KO
K12581  CCR4-NOT transcription complex subunit 7/8
Organism
caua  Carassius auratus (goldfish)
Pathway
caua03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:caua00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    113057927
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:caua03019]
    113057927
Messenger RNA biogenesis [BR:caua03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     113057927
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     113057927
SSDB
Motif
Pfam: CAF1
Other DBs
NCBI-GeneID: 113057927
NCBI-ProteinID: XP_026081319
Ensembl: ENSCARG00000012675
UniProt: A0A6P6L9T7
LinkDB
Position
39:11936726..11943830
AA seq 286 aa
MPAATVDHSQRICEVWASNLDEEMKRIRQVARKFNYIAMDTEFPGVVARPIGEFRSNADY
QYQLLRCNVDLLKIIQLGLTFMNEQGEYPPGTSTWQFNFKFNLTEDMYAQDSIELLTSSG
IQFKKHEDEGIETLYFAELLMTSGVVLCEGVKWLSFHSGYDFGYLIKILSNSKLPEEEVD
FFEILRLFFPVIYDVKYLMKSCKNLKGGLQEVAEQLELERIGPQHQAGSDSLLTGMAFFK
MREMFFEDHIDDAKYCGHLYGLGSGSSYVQNGTGNAYEEEANKQQS
NT seq 861 nt   +upstreamnt  +downstreamnt
atgcccgcagccactgtggatcatagtcaaagaatatgtgaggtttgggccagcaacctg
gatgaggagatgaagaggatccgacaggtggcccgaaaattcaactacattgcaatggac
acagagttcccaggtgtagttgcaagaccaatcggtgaatttagaagcaatgctgattac
cagtaccagctgttgcggtgtaatgttgacttgttaaagatcatccagcttggccttaca
tttatgaacgaacagggggaataccctccagggacatcaacatggcagttcaacttcaaa
tttaacctcacggaagacatgtatgcacaggattccatcgagttgctcacctcgtcaggt
atccagttcaagaagcatgaggacgagggtattgagacactgtactttgctgagctgctt
atgacctcaggtgtggtgctttgtgagggggtcaagtggctctcatttcatagtggctat
gactttgggtacttgattaaaattttgtccaattcgaaattgccagaggaagaggttgac
ttctttgagattcttcgtttattttttcccgtcatttacgatgtgaagtacctcatgaag
agctgtaagaacttgaagggtggtctgcaggaggtggcagagcagcttgagctggagaga
attggacctcagcatcaggcaggctctgattcactcctcacaggaatggcttttttcaag
atgagagagatgttttttgaggatcacattgatgatgcaaagtattgtggtcacttgtat
ggactgggttcaggctcatcctatgtccagaacggcaccggaaatgcttacgaagaggag
gcaaacaagcagcagtcatga

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