Carassius auratus (goldfish): 113058058
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Entry
113058058 CDS
T07313
Name
(RefSeq) FACT complex subunit SSRP1-like
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
caua03000
]
113058058
03036 Chromosome and associated proteins [BR:
caua03036
]
113058058
Transcription factors [BR:
caua03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
113058058
Chromosome and associated proteins [BR:
caua03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
113058058
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
Rttp106-like_middle
SSrecog
HMG_box
POB3_N
HMG_box_2
HMG_WDHD1
SSRP1_C
YABBY
Motif
Other DBs
NCBI-GeneID:
113058058
NCBI-ProteinID:
XP_026081512
Ensembl:
ENSCARG00000007651
UniProt:
A0A6P6LAB0
LinkDB
All DBs
Position
39:8991926..9003132
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AA seq
701 aa
AA seq
DB search
MGDTLEFNNIQTELKGSWNDGRLRFSKQSVVYKSHKTGKVDSISAPELSAAQWRRVCLGH
GIKLATSAGHIYRYDGFRDTDFEKISAFFKANYKVELAEKDMCVKGWNWGTAKFSGSLLS
FDVNESPVFEIPLASVSQCATGKNEVTVEFHQNDDAEVSLMEVRFYVPPNTGDDGSDPVE
AFAQNVLSKADVIQATGDAVCIFKELQCLTPRGRYDIRIYPTFLHLHGKTFDYKIPYTTV
LRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKDEELSLSLNMSEDEVEKRYE
GKLSKNMSGSLFEIVSRVMKALVNRKITVPGNFQGHSGSQCITCAYKASSGLLYPLERGF
IYVHKPPVHLRFEEISCVNFARGTTTTRSFDFEIETKQNNQYTFSNIEREEYGKLFDFVN
AKKLNIKNRGIKEGMKGADGYSDSDEDQHDAYLERMKEEGKIREEGDGSDESEGDSDESF
NPGEEDEDVPEEYDSNASVSDSEADDADSEDEAKKKKPEKKPKKVVKEKKERKPRKEKKV
KDPGAPKRPMSAYMLWLNGNRERIKSENPGISVTEISKKAGEMWKQLSKDRKEEWDRKAE
EAKKQYEKAMKEYRESGGGATAASVTKEKKKKGGKVEAKKKSGGEKEKKKEPVNESFKSK
EFISSEESSSESDRDRGSKRKASEDEEDEDTPASSEESGSD
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atgggagacactctggagtttaataacattcaaacggagctaaagggatcatggaatgac
ggccgtctgaggttcagcaagcagtcggtggtctataaaagccataaaacagggaaggtg
gacagtatctcggctccggagctgtctgcggctcagtggcgtcgcgtctgtctcggtcac
gggatcaaactggccaccagcgccggacacatctacagatacgacggcttcagagacacc
gatttcgagaagatctctgcgttttttaaagcgaactacaaggttgagttggcggagaag
gacatgtgtgtgaagggctggaactggggcactgccaaattctcagggtctctgctgtcg
tttgatgtgaacgaaagtcccgtcttcgagatcccgctggccagcgtatcccagtgtgca
acagggaagaacgaggtgacggtggagtttcatcagaacgacgacgcagaggtgtccctc
atggaggtccgcttctatgtgcctcccaacaccggagacgacggatcagaccctgtggag
gcgtttgctcagaatgttctctcgaaggcagatgtcatccaggccaccggagacgctgtg
tgcatctttaaagagcttcagtgtctgacgccgagaggaaggtatgatatccgtatctac
cccaccttcctccacctgcacgggaagacgtttgactataagatcccttacaccaccgtg
cttcggctcttcctgctgccgcacaaggaccagaggcagatgttcttcgtgatcagtctg
gatccgcccattaaacagggtcagacgcgttatcacttcctcatcctcctcttctctaaa
gatgaagagctgagtctgtctctgaacatgagcgaggacgaggtggagaagcgatatgaa
ggcaagctcagtaagaacatgtccgggtcgctcttcgagatcgtcagcagggtcatgaag
gctctggtcaacaggaagatcacggtgcccggaaacttccagggtcactcgggctctcag
tgtataacgtgtgcgtacaaggcgagctcggggctgctgtatcctctggagcgaggcttc
atctacgtgcacaagcctccggttcacctgcgctttgaggagatctcctgcgtgaacttc
gccagaggaaccaccaccacacgctccttcgacttcgagatcgagaccaagcagaacaac
cagtacaccttcagcaacatcgagagggaagaatacggaaaactctttgactttgtcaac
gccaagaagctgaacatcaagaacagaggaatcaaagagggcatgaaaggagccgatggc
tacagcgactctgatgaagaccagcatgatgcttacctggagcggatgaaagaagagggc
aagatccgggaggagggagacggcagcgacgaatccgagggagacagcgacgagtctttc
aaccctggagaagaggatgaggatgtccctgaagagtatgacagcaacgcttcagtgagc
gacagcgaggcggacgacgcagacagcgaggatgaagccaagaagaagaagcctgaaaag
aagcccaagaaagtggtgaaggagaagaaagagaggaaaccacggaaagagaagaaggtg
aaggaccccggggccccgaagagaccgatgagcgcttacatgctgtggctgaacggcaac
cgagagcgaatcaagagcgagaatcctgggatatctgtcaccgaaatctccaagaaggct
ggagagatgtggaagcagctgagcaaagaccgcaaagaggaatgggaccgaaaagcagaa
gaggccaagaaacaatatgagaaagccatgaaggagtacagagagagtggaggaggagcg
acagcagcgtctgttaccaaagaaaagaaaaagaaaggaggaaaggtggaggccaagaag
aagagtggaggagaaaaggagaagaagaaggaacctgtaaacgagagctttaagagtaaa
gagttcatctcgagcgaggagagctcgtctgaatctgatcgggacagaggcagcaaacgc
aaggcctctgaggatgaggaggatgaggacacacccgccagctcagaggagtcagggtcc
gactga
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