KEGG   Carassius auratus (goldfish): 113058223
Entry
113058223         CDS       T07313                                 
Name
(RefSeq) syntaxin-1A-like isoform X1
  KO
K04560  syntaxin 1A
Organism
caua  Carassius auratus (goldfish)
Pathway
caua04130  SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:caua00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04130 SNARE interactions in vesicular transport
    113058223
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:caua04131]
    113058223
Membrane trafficking [BR:caua04131]
 SNARE
  Syntaxin (Qa)
   Stx-PM
    113058223
SSDB
Motif
Pfam: Syntaxin SNARE Syntaxin_2 ATG17_like Ferritin DUF6115 Spectrin_Anc-1 COG5_N Hydro_N_hd T2SSF TSNAXIP1_N Lzipper-MIP1 DUF6584 Spectrin_Anc-1_2 Alanine_zipper PoNi_N
Other DBs
NCBI-GeneID: 113058223
NCBI-ProteinID: XP_026081700
Ensembl: ENSCARG00000058091
UniProt: A0A6P6LAV4
LinkDB
Position
40:1884436..1912926
AA seq 305 aa
MTLLSASDQRVTECNMKDRTQELRQGKDPEEVDEVAVGIEKGFMDEFFEQVEEIKGFIDS
LAERVEEVKINHGAILASPNPDEKTKADLEELMTDIKNLANKVRSKLKNIQQTVEQEEAL
NHSKNPSADLRIRKTQHLTLSRKFVEVMTEYNATQSDYRERCKGRIQRQLEITGRNTTNE
ELESMLESNNPSIFTSGIIMDCNISEQVMNEIETRHNEIIKLENSIRELHDMFMDMAMLV
ESQGELINNIEKNVSSAQEYVEKAKEETKAAVKVQKTSRTKLILIGGCVSICLFILIISL
AIGLS
NT seq 918 nt   +upstreamnt  +downstreamnt
atgacgctcttgtccgcgagcgatcaacgcgtcactgaatgcaacatgaaggaccgcaca
caagagctcagacaaggaaaagacccagaagaggtggatgaggtggccgtcggtattgaa
aagggtttcatggacgagttctttgagcaggtagaggagattaaagggttcattgactct
ctggcagagagagtagaagaagtgaaaataaaccacggtgccatcctggcctctccaaac
ccggatgagaaaacaaaagcggatttggaggagttgatgacagatatcaagaacttggct
aataaagtacgctccaagttaaagaatatccaacagaccgtagagcaggaggaggcacta
aaccattcaaaaaatccatcggctgatctgaggatacggaaaacacagcacttaaccctg
tcacgtaaatttgtggaggtgatgacagaatataatgcaacgcagtcagattacagggag
cgctgtaaaggacggatacagagacagctggagatcacgggaagaaatacgacaaatgag
gagttggagagcatgttagaaagtaacaacccctccatcttcacttccggaatcatcatg
gactgcaacatcagtgaacaggtcatgaatgagattgagacgcggcacaatgaaatcatc
aaactggagaacagcatccgtgagctgcatgatatgttcatggatatggccatgctggtg
gagagccagggagagttaataaacaatatagagaagaatgtcagcagtgcacaggaatat
gtggaaaaggccaaagaggaaaccaaagcagctgtcaaagtccagaagactagcaggacg
aagttgatcctgatcggcgggtgtgtgtccatctgtctgttcatcctcatcatctctcta
gccattggattgagctaa

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