Carassius auratus (goldfish): 113058223
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Entry
113058223 CDS
T07313
Name
(RefSeq) syntaxin-1A-like isoform X1
KO
K04560
syntaxin 1A
Organism
caua
Carassius auratus (goldfish)
Pathway
caua04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
113058223
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
caua04131
]
113058223
Membrane trafficking [BR:
caua04131
]
SNARE
Syntaxin (Qa)
Stx-PM
113058223
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin
SNARE
Syntaxin_2
ATG17_like
Ferritin
DUF6115
Spectrin_Anc-1
COG5_N
Hydro_N_hd
T2SSF
TSNAXIP1_N
Lzipper-MIP1
DUF6584
Spectrin_Anc-1_2
Alanine_zipper
PoNi_N
Motif
Other DBs
NCBI-GeneID:
113058223
NCBI-ProteinID:
XP_026081700
Ensembl:
ENSCARG00000058091
UniProt:
A0A6P6LAV4
LinkDB
All DBs
Position
40:1884436..1912926
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AA seq
305 aa
AA seq
DB search
MTLLSASDQRVTECNMKDRTQELRQGKDPEEVDEVAVGIEKGFMDEFFEQVEEIKGFIDS
LAERVEEVKINHGAILASPNPDEKTKADLEELMTDIKNLANKVRSKLKNIQQTVEQEEAL
NHSKNPSADLRIRKTQHLTLSRKFVEVMTEYNATQSDYRERCKGRIQRQLEITGRNTTNE
ELESMLESNNPSIFTSGIIMDCNISEQVMNEIETRHNEIIKLENSIRELHDMFMDMAMLV
ESQGELINNIEKNVSSAQEYVEKAKEETKAAVKVQKTSRTKLILIGGCVSICLFILIISL
AIGLS
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgacgctcttgtccgcgagcgatcaacgcgtcactgaatgcaacatgaaggaccgcaca
caagagctcagacaaggaaaagacccagaagaggtggatgaggtggccgtcggtattgaa
aagggtttcatggacgagttctttgagcaggtagaggagattaaagggttcattgactct
ctggcagagagagtagaagaagtgaaaataaaccacggtgccatcctggcctctccaaac
ccggatgagaaaacaaaagcggatttggaggagttgatgacagatatcaagaacttggct
aataaagtacgctccaagttaaagaatatccaacagaccgtagagcaggaggaggcacta
aaccattcaaaaaatccatcggctgatctgaggatacggaaaacacagcacttaaccctg
tcacgtaaatttgtggaggtgatgacagaatataatgcaacgcagtcagattacagggag
cgctgtaaaggacggatacagagacagctggagatcacgggaagaaatacgacaaatgag
gagttggagagcatgttagaaagtaacaacccctccatcttcacttccggaatcatcatg
gactgcaacatcagtgaacaggtcatgaatgagattgagacgcggcacaatgaaatcatc
aaactggagaacagcatccgtgagctgcatgatatgttcatggatatggccatgctggtg
gagagccagggagagttaataaacaatatagagaagaatgtcagcagtgcacaggaatat
gtggaaaaggccaaagaggaaaccaaagcagctgtcaaagtccagaagactagcaggacg
aagttgatcctgatcggcgggtgtgtgtccatctgtctgttcatcctcatcatctctcta
gccattggattgagctaa
DBGET
integrated database retrieval system