Carassius auratus (goldfish): 113058225
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Entry
113058225 CDS
T07313
Name
(RefSeq) rab5 GDP/GTP exchange factor-like
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
caua
Carassius auratus (goldfish)
Pathway
caua04137
Mitophagy - animal
caua04145
Phagocytosis
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
113058225
04137 Mitophagy - animal
113058225
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
caua04131
]
113058225
Membrane trafficking [BR:
caua04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
113058225
Protein recycling
Other Rab GTPase associated proteins
113058225
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS9
zf-A20
DUF5601
EST1
Motif
Other DBs
NCBI-GeneID:
113058225
NCBI-ProteinID:
XP_026081709
Ensembl:
ENSCARG00000058228
UniProt:
A0A6P6LAX8
LinkDB
All DBs
Position
40
Genome browser
AA seq
463 aa
AA seq
DB search
MDSRGERRGFSLQQSDLMCKKGCGFYGNAVWQGFCSRCWRQETQCSQAKQIEDDRALAER
LQREEEAAYASSRQEEHPPPQSSRTHSVPIVKRLFTSAPKTPARTDAGAPQTPLSRSTSL
GRQPSADRDHVTQHFIDFLKPFQRPGYDIFKQCHAFVENIAHKKVAVRGEDFSDSVQDFY
QNISENLQTNFKGSPDVMDEVERYVMGRLYEQLFCPDHTDDEKKDLVIQKRIRALHWVSI
EMLCVPVDEQIPKVSDSVERAITDLIDLDSRKVPREKLACVTRCSKHIMTAIQGSKKAAA
SADDFLPTLVYIVLRANPPRLHSNIQYITRYSNPSRLMSGEDGYYFTNLCCAVAFIEKLD
AQSLNLSHEDFQLYMSGASSPSGPKAASSGHSSQNGFREERRAAEPQRDTDLIEWSDGQE
LSVLGLLEEPPAHTHTSDTFTIDSDNIGGDSLPPPLQPQKFTG
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atggactctcggggggagcgcaggggcttcagcctccagcagtctgacctgatgtgtaag
aaaggatgcggtttctacggtaacgctgtctggcagggcttctgctccagatgctggcgt
caggagacccagtgcagccaagccaaacagatcgaggacgacagagcactggccgagagg
ctccagagagaggaggaagcagcgtacgccagcagccgtcaggaggagcatcctccacca
cagtcctccagaacacacagcgtgcccatagtgaagagactgttcacctccgctcccaaa
acacctgccaggacagatgcaggagctccacagacgcctctgagccggagcacatcgctc
ggccgacagcccagtgcagaccgtgatcacgtgacacagcacttcattgacttcctgaag
cccttccagagacccggatatgacatttttaaacagtgccatgccttcgttgaaaatatt
gcacacaaaaaggtggctgtacgtggtgaggacttctcagactctgtgcaggatttctat
caaaacatttcagagaacttacagacaaactttaaagggtctccagatgtgatggatgag
gtggagcgctatgtgatgggccgtctgtatgagcagctcttctgccctgaccacaccgat
gatgagaagaaagacctggtcatccagaagagaatcagggctctgcactgggtctccatt
gagatgctgtgtgttcctgtagacgagcagatccctaaagtatcagacagtgtggagaga
gccataacagacctgatcgacttggactctagaaaggttccccgggagaagctggcgtgt
gtcacccggtgtagtaaacacatcatgacggccatccagggcagtaagaaagctgccgcc
tctgctgacgacttcctgcccaccctcgtctacatcgtgctgagagccaatcctcctcga
ttacactccaacatccagtacatcactcgctacagcaaccccagccgcctcatgagcgga
gaggacggatattacttcaccaacctgtgctgcgccgtggcgttcatcgagaagcttgat
gcgcagtcgctgaacctgagtcatgaagacttccagctctacatgtctggtgcatcgtct
ccgtcgggtcccaaagccgcttcgtctggccacagctcacagaacggctttagagaggag
cgccgcgcagccgagccacagcgggatacagacctcatcgagtggagcgacggccaggag
ctctcagtgctgggcttgttagaagagcctcctgcacacactcacacctcagacacattc
actattgactcagacaacatagggggcgacagcctgcctcctccgttacagccgcagaag
ttcactggatag
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