Carassius auratus (goldfish): 113058270
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Entry
113058270 CDS
T07313
Name
(RefSeq) synergin gamma-like isoform X1
KO
K25219
synergin gamma
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
caua04131
]
113058270
Membrane trafficking [BR:
caua04131
]
Endosome - Golgi transport
Others
Aftiphilin/p200/gamma-synergin complex
113058270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EH
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
113058270
NCBI-ProteinID:
XP_026081813
Ensembl:
ENSCARG00000013941
UniProt:
A0A6P6LB05
LinkDB
All DBs
Position
40:3564920..3604183
Genome browser
AA seq
1322 aa
AA seq
DB search
MALRPGSGGGGSFMYSVGGSIGPPQGMMPIQQQQGFPMVQVMQPNMQGMMGMNFGAQMPG
AMPIQGGIAIGMQTPGMQFMGQPQFMGMRGPGPQFPADLQKQMAEEHQKRLEQQQRMLEE
DRKRRQFEEQKQKLRLLSSVKPKTGEKSRDDALEAIRGNLDGFSRDAKMHPTPSSQSKKP
DSSPSHSSVTSHSLPPAFSDDDDEFSDFVQGPVDASSSFPSSSLPPSSPSLRAAHVSQPL
EMRPGQHPPSSPLPHAVPSSLPVSPAIQHSSVISSSKSAFQDTAPESLPANQAPPAADIQ
PTSTSGVGVYPQQDMQPMVPSWLYNDSLIPELFKKVLEFTMTPTGIDTAKLYPILISSGL
PREALGQIWALANRTTPGKLTKEELYTVLALIGVAQSGLTVMSLEILSQLPSPPVPNLPA
MTMAVPAVLPQHQQPIITQPPVSMAMPVAAPPVMGMTLNPPAQQPASFITNFPPVQATKT
DDDDFQDFQEAPKAGAGGDSFTDFQGETGGGFPSMTSSSQSGVPAMLTPVSGSSSSSSSD
KYAVFKQLSVEQPAEPTPPVSDSGDKYRVFRELEQPSDRKPVESSGDSSERAREGFADFK
SVSADDGFTDFKTADTVSPIDPPDQAKFQPTFPPPFSSSQSLSQSQPASLAQPRNSLNMA
DLDLFTTVAPPTPTSTPDSKLSLFPSAPPSLVLPSVVKPSSVRTDDFGDFALFGSSSSSE
VAPTTSTVGAGTGTIVQDDFADFMVFGSSRDPRSETNSGDGGSEGQAETSRQQISTDKYD
VFKRFSLEGGLAFDDNKESGGGSFSSLKSENDDFADFQSSKFCMALGASDKSLVDKVAAF
KQAKEDSASVKSLDLPSIGGSSVGKEDSEDALSVQLDMKLSDMGGDLKHVMSDSSLDLPG
LSSHQPPAAESDDLKFDPFGTSAVSSLGSYDWSDKEDLSAGQSKKLQGGLPSSAVVQKKE
TFFGSSESITHTTVAKVTTFPIEDGGSTTESRFETFADFGSIEQDGQDDDDDFGDFASTV
SEKSDSPPGTTEAEGNQGELTDDFGAFQGDKPKFGKSDFLKASTQAKVKSSEEMIKNELA
TFDLSVLGSHKRSHSLGEKEIVRSISSPAPEQPFRDRSNTLNEKPALPIIRDKYKDLTGE
VEESERYAYEWQRCLESALQVITTANNTLNGISSSTVCTEVIQSAQGMEYLLGVVEVYRV
TKRVELGVKATAVCSEKLQELLKDISRVWNNLMGFMSLANLTPDESSLDYSSCILRHGIK
NAKELACGVCLLNVDSRSKAFNSETDNFKLIYGGHQYHASCANFWINCVEPKPPGLILPD
LL
NT seq
3969 nt
NT seq
+upstream
nt +downstream
nt
atggcgcttcggcccggatcaggtgggggcggcagttttatgtactctgtaggagggagc
attggtccaccgcaaggaatgatgcccatacagcagcagcagggctttcccatggtccag
gtcatgcagcccaacatgcaaggcatgatgggaatgaattttggagcacagatgcctggt
gccatgccaatacagggtgggatagcaataggcatgcagacccctgggatgcagttcatg
ggtcagcctcagttcatgggcatgaggggcccggggccacagttccctgcagacctacag
aagcagatggctgaggaacatcaaaaacgtctggagcagcagcagaggatgctggaggag
gaccggaagagaagacagtttgaggagcagaaacagaaactacgcctactgagcagcgtc
aaacccaaaactggggagaagagtcgtgacgatgctttagaggccatcagaggaaatctg
gatgggttcagcagagatgccaagatgcatccaacaccatcttcacaatctaagaaacca
gactcatcgccatctcattcctctgtcacctcacattcccttcctcctgctttctctgat
gacgacgatgagtttagtgactttgtgcaaggccctgttgatgcctcctcctcattcccc
tcttcatcccttcctccgtcctctccttcactgagagccgctcatgttagccagccatta
gagatgaggcctggccagcatcccccttcctcccctctccctcacgctgtcccttcatct
ctccctgtctcacctgccatccaacactcttctgtcatctccagctccaaatctgcattc
caagatactgcaccggagtctctacccgcaaaccaggcgccccctgcagcggacatccag
cccactagcaccagcggtgtgggtgtctacccccaacaagacatgcaacccatggtgcca
tcctggttgtacaatgactctcttatcccagagttattcaagaaggtccttgagttcact
atgacaccaacaggtattgacacagccaaactctacccaattctaatatcatcgggtctg
ccccgggaagctctcggacagatctgggccttggccaaccgcaccacacctgggaagctg
accaaggaagagctgtacaccgtcctggccttgattggagttgctcagagtggtcttaca
gtcatgagtttggaaatcctgagtcagttaccctccccgcccgtgcccaacctacccgcc
atgactatggccgttcctgctgtcctgcctcagcaccagcagcccatcattacccagcca
cccgtgtccatggccatgccggtcgccgcaccacctgtcatgggcatgacactgaaccca
cctgcacaacaaccagccagcttcatcaccaacttccctcctgttcaggctaccaagact
gatgacgatgatttccaggacttccaggaagcccccaaagctggtgctggcggtgactca
ttcacagatttccaaggagagacaggaggagggttccccagcatgacgtcatcatcccaa
agcggtgttcctgccatgctgactccagtgtcagggtcttcatcatcctcctcctctgat
aaatacgcagtgtttaaacagttgtctgtggagcagcctgcagagcccacacctcctgtc
tcagattcaggtgacaaatacagagttttccgagagcttgagcagccatcagacagaaaa
ccagttgaatccagtggcgacagctctgagagagccagggagggatttgctgatttcaag
tctgtcagtgccgacgatggcttcacagactttaaaacagccgacacggtctctccaata
gacccaccagaccaggccaagttccagccaacttttcctcctcctttctcttcttctcag
tctctgtcccaatcacagccagcctctctggctcaacctagaaattctctcaatatggca
gacctggacctctttacaacagtggctcctcctactcccacttccactcctgactccaaa
ctcagtctgttcccttcagcgccaccatccctggtattgccctcagtagtgaaaccttcc
agtgtaaggactgatgactttggtgattttgctctttttggctcatcatcatcctctgaa
gtagctcctaccacctctacagtaggagcaggaactggaacaatagttcaggatgacttt
gctgacttcatggtgttcgggagctcaagagatccgagaagtgagaccaactctggagac
ggtggaagcgagggccaagcagagacatctcggcagcaaatcagcactgataagtatgat
gtcttcaagcggttttccttagaaggtggcctggcatttgacgataacaaagaaagtggt
ggaggttccttctcgtcgctcaagagcgagaatgatgactttgcagatttccagtcatcc
aaattctgtatggcgctaggcgcatctgacaagagcctggtggacaaagtggccgccttc
aagcaggccaaagaggactctgcctctgtgaaatccctggacctcccgtccattgggggc
agcagcgtggggaaggaggactcggaggatgcgctctcagtacagctagacatgaagttg
tcagacatgggtggagacctgaagcatgtgatgtctgatagctccctagatctccctggt
ttgtcatcccatcaacccccagctgcagagtctgatgatttaaaatttgacccctttggc
acatctgctgtcagcagtcttggcagctacgactggtccgacaaggaagatctctcggcc
ggtcaaagtaagaagctccagggaggactgccatcttcagctgtcgtccagaagaaagag
acctttttcgggagttcggagagcatcacccacaccacggttgcaaaggtgaccaccttc
ccaatcgaagacggtggctccaccaccgaaagccgattcgaaaccttcgctgactttggc
tccattgagcaggacggtcaagatgacgacgatgactttggtgactttgccagcacggtt
tcggagaaatcagactccccgcctggaaccacagaagcagagggcaaccagggtgaatta
acggatgactttggagccttccaaggtgacaagcccaaatttggcaagtccgacttcttg
aaagccagcacgcaggccaaagtgaaatcaagtgaagagatgatcaagaacgaacttgcc
acctttgatttgtctgtgctgggttcccataagcgtagccacagtctgggagagaaagaa
attgtacggtccatctcctctcctgcccccgagcagcccttcagagaccgatccaacacc
ctaaatgaaaaacctgcgctgccgatcatccgcgacaagtacaaggacctcacaggagag
gtggaggagagtgagcgatacgcgtacgaatggcagaggtgtttggagagcgctctgcag
gtcatcaccactgccaataacacccttaatggcatcagtagctccacggtgtgcacagag
gtcatccagtcagcacaagggatggagtacctgctgggtgtggtggaggtgtatcgcgtg
accaagcgtgtagagctgggtgtcaaagccacggctgtttgttcggagaaattacaggag
ctgcttaaagacatcagccgtgtgtggaacaacctgatgggcttcatgtcgctggcaaac
ctcacgcccgatgagagctcactggactactcttcctgtatattgaggcacggcattaag
aatgccaaagagctggcgtgtggagtgtgtctgctcaacgtggactcacgcagcaaggcc
tttaattcagagacggacaacttcaagctcatttatggaggtcaccagtaccacgccagc
tgtgctaacttctggattaactgtgtggaacccaaacctccaggtctcatcctccctgac
ctgctctag
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