Carassius auratus (goldfish): 113058502
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Entry
113058502 CDS
T07313
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit
KO
K07466
replication factor A1
Organism
caua
Carassius auratus (goldfish)
Pathway
caua03030
DNA replication
caua03420
Nucleotide excision repair
caua03430
Mismatch repair
caua03440
Homologous recombination
caua03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
113058502
03420 Nucleotide excision repair
113058502
03430 Mismatch repair
113058502
03440 Homologous recombination
113058502
03460 Fanconi anemia pathway
113058502
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
caua03000
]
113058502
03032 DNA replication proteins [BR:
caua03032
]
113058502
03400 DNA repair and recombination proteins [BR:
caua03400
]
113058502
Transcription factors [BR:
caua03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
113058502
DNA replication proteins [BR:
caua03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
113058502
DNA repair and recombination proteins [BR:
caua03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
113058502
MMR (mismatch excision repair)
113058502
DSBR (double strand breaks repair)
HR (homologous recombination)
113058502
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
CATSPERD-E_C
Motif
Other DBs
NCBI-GeneID:
113058502
NCBI-ProteinID:
XP_026082238
Ensembl:
ENSCARG00000020189
UniProt:
A0A6P6LC69
LinkDB
All DBs
Position
40:complement(9125468..9147799)
Genome browser
AA seq
602 aa
AA seq
DB search
MTVRLSEGAIESLTKGTEVNNPVLQCVNIRKIDGGNGLSRFRVMMSDGLHTMSSFMLSTQ
LNPMAEQEQLAPNCVCMLKRSVTNILKDGRRVIVILDIEVIKSADQMAGKIGDPTPYVEG
QSKQQSTAPAPTVRPLQPQNGNDGSMNRPSAQSFGKKPMAAPSTPGGSSKVVPISSLNPY
QSKWTVRARVTNKSAIRTWSNSKGDGKLFSMELVDESGEIRATGFNNEVDKFYSIIEQGK
VYYISKGSLKIANKQFSSLKNDYEMTLNGETSIIPCEDSHDVPKVQCDFVSIADLESREK
DTIVDVIAVCKNTEDVTRITTKNSREVSKRNIQLMDMSGKVIQLTMWGNDAETFDGSGQP
ILAIKGARLSDFGGRSLSTLYSSTVMINPDIPEAYKLRGWYDKEGHAIDGQSMTELRGPG
GGGGNTNWKTLAEVKNEHLGHGDKADYFSCIATIVYIRKENCLYQACSSKDCNKKVVDQQ
NGMYRCEKCDKEFPDFKYRLMLSANIADFGDNQWVTCFQDSAETLLGQNASYLGQLKDSN
EAAFDEVFQHANFNTFVFRNRVKLETYNDESRIKVTVVDVKPVDHREYSKRLIINIRKLA
AQ
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgactgttcgattgtcagagggggcaattgagtccctgaccaaaggaactgaagtcaac
aaccctgttctgcagtgtgtgaacattcgcaagattgatgggggaaatggcctgtctcgt
ttccgtgtcatgatgagtgacgggctgcacactatgtcctcattcatgctctccacacag
ctcaatcccatggctgagcaagaacagttggcccctaactgtgtgtgtatgctgaaaaga
agcgtcactaatattctcaaagatggacgacgtgtgatagttatactggatatagaggtg
atcaagtctgctgaccagatggcaggaaaaattggagacccaactccttatgtggagggc
cagtcaaagcaacagagtacagctccggctccaactgtgcgtccattacagcctcagaat
ggaaatgatggttcaatgaacagaccttctgctcagagcttcgggaaaaagcccatggct
gcccccagcactcctggaggcagctctaaagttgtgcccatttccagtctcaatccatac
cagtcaaagtggactgttcgagccagagtcaccaataagagtgccatccgcacatggagt
aactccaaaggggatgggaagctcttctccatggagcttgttgatgaaagcggggagatt
agagcaactggatttaataacgaagtggacaaattctactcaatcattgagcagggaaaa
gtctactacatctcaaaaggcagcctgaagattgctaacaaacaattctcctcacttaag
aatgattatgaaatgactctcaatggcgagacaagcatcatcccttgtgaggacagccat
gacgtccccaaggtgcagtgtgactttgtttccattgctgacttggagtcccgggagaaa
gacaccatcgtagatgtgattgcagtttgtaaaaacacagaggatgtgacgcgcatcacg
accaagaacagtcgagaggtttcgaagaggaacatccaactgatggacatgtccggcaaa
gtcatccagctcaccatgtggggtaacgatgcagagacgtttgatggcagtgggcagcct
atcttggccattaagggagcaagattgtctgactttggtgggcgttctctctccactctt
tacagcagcacggtcatgatcaaccccgacattcctgaggcatacaaactgcggggatgg
tatgataaggaaggacatgctatagatggccagtcgatgactgagttaagaggacctggc
ggcggtggtggaaacacaaactggaagacacttgcggaagtcaagaatgagcacttagga
catggagacaaagctgattatttctcttgcatcgccaccatagtctatatccgtaaagag
aactgcttgtatcaggcctgttccagtaaagactgcaacaagaaggtggtggaccagcag
aacggcatgtaccgctgtgagaaatgcgacaaagagttccccgacttcaaataccgtctc
atgctctcggccaacattgctgattttggagacaaccaatgggtgacttgctttcaggac
agtgcagagaccctcctgggccagaatgcaagttatctcggccaactcaaggactcaaac
gaagctgcatttgatgaggtctttcagcatgcaaacttcaatacttttgtcttccggaac
cgagtgaagctggagacctacaatgatgaatctcgtattaaagtgacagtggtggacgtc
aagccagttgaccatcgagaatacagcaaacggctgatcatcaacataaggaagttggct
gcacagtag
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integrated database retrieval system
