Carassius auratus (goldfish): 113058634
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Entry
113058634 CDS
T07313
Name
(RefSeq) protocadherin Fat 4-like isoform X1
KO
K16669
protocadherin Fat 4
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
caua04515
]
113058634
Cell adhesion molecules [BR:
caua04515
]
Cadherins
Cadherin related
113058634
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Laminin_G_2
Cadherin_CELSR2_9th
Laminin_G_1
EGF
Cadherin_pro
EGF_TEN
hEGF
EGF_CA
EGF_2
Ig_Shg
DUF3377
K319L-like_PKD
Motif
Other DBs
NCBI-GeneID:
113058634
NCBI-ProteinID:
XP_026082499
UniProt:
A0A6P6LD34
LinkDB
All DBs
Position
40:complement(13384650..13400327)
Genome browser
AA seq
3024 aa
AA seq
DB search
MIKFGLIHLCIFLMHATIFFYGVCSISSPWTQWDNSNEKKWFNISALPSTSKSGLAPLHS
RRFTQLSFSKSVYSFEVKEDTPPGTIVGHVEAAYSEENETSVYSVQEDDGDGLFLLNPHS
GEFLLSRALDFEMERYYILTAAAQQGERELTGVRVYFSVIDVNDNPPVFSQNDFSASIPE
DSPVGMCFLNLNVTDRDEGIFGEVDLMVTSGNLENKFSINQHQTLCIRGKLDRETNAMYS
LIVQANDRALPTEARLTTSVHVTVYLLDVNDNSPLITTPSTVRFPENAPLHSVVTVIQAT
DADAGSNGEVVFSFESAEEEPFSINSSTGVVYLRKPLDRESEDVVTVTLNVKDKGVPSLF
SSMYLTVLIEDVNDHNPEFTQSSYSLSVYENVPRGTSLLRVNASDQDIGSNGQVRFSVSE
SEFMVDSVLGVVSVKDKMDREKKPFYIFFVIAEDQGDIQRSTTATINIAVLDVNDCVPLL
SPESLTLHVFENGEDSTQHFHQIHASDEDSNEVNGQLTYSIESGNDESLFSLHPNGTFQI
LEDLDRELKSQYMLKVNAADSGFPSLTGTGTLVIVVDDVNDNIPIFDREWFSTHILEDSP
VGTVFLRVAASDLDDGTNGQLRYSLDDLDTPFSINETSGDLFTVSALDRETESFYRFSVT
VTDGHPTKPLSSSAVVSVTVEDVNDHLPSFLYGPYVANVPAGITKGSVVCTVMAEDADAG
LNAQLNFSLHGQHAYLLSINSRTGTVFIKDSVNKRNDITVEVHVQDGADLPKMDTTTLTV
RFQNDTYFPHVAVQVYKDVLSEDSPKETLVAIVTAESQRNTPMSFYLASGNFGEVFELHH
STGVLTVKDPLDFESNMHFHLIVEARDSGIPPFSSYAELNLNISDVNDNPPVFSQNIYRC
EVYENLASGRVCNVLATDADSGVFAEVEYFILAGNIEGAFKIDKIHGILSTTKRLDREKI
PYYNLTLKAIDKENNSLSAIATVIIIVLDTNDHAPRFSQIFITEVPEDAPLGFPVIQIAA
TDEDVGLNAVIEYTIIGQNSEFPFSIDKTTGILLVLHPLDREDQNHYIVKVNANDSAWSI
STDVTIDITDVNDNTPIFYQPRYTLTVPEMKMHEVFLLQISATDRDLGENAQILYFIDPP
NELFLVNASTGKISTKQPIVLHESESVNLTFTVVASDCGSVPLNSSSIVSVTLVRHNQFP
PSFIPFRPLVPVPLTLDVGTEVIQISAIDQDSLVRNNSVEYFNSGGNGSLYFEVEHNSGR
VLVNKTLANSLGTILTLQITAKDKGLPPFFAQTEISFEVTHENLFAPHFLNRKVEFFVPE
DLPIGSVIGKIQGKDKDAGINGVISYSFDGGNENGLFSIGQSSGLIMLVKALDFEEFETH
HLNVIAEDGGWRPKMERINITVYVTDLNDNPPLFTSTNYIATVSENALIGTSVLQVWAKD
ADTGIHSQITYTLIAGDILLFYLDTKNGTITTLDIFDYEQKQHYELTVKATNIGFPYLFD
IARIHIQIAGLNEFIPAFQRHIYNFTVSEALPPQTEIGRVVAIDYDQGPDGEVFYVLAGQ
SKKANFVVDEHTGIIYVSKDLKNRLQNNEILRVLAKNRGAITGFNVDETLIHLDILDEND
PPNFDSMLYTATVSEDISIGTSVTKVKAVDQDVIIEWSRFSYSIEHGNINSSFIIDPVSG
VISINSHLDREMWAFYNLTVIAVDEGSPAVTGSTKVAIVVSDVNDNPPKLLTTEGFIREN
QPAGTLVSTLTATDDDLPPNQGPFTYWMMRPAEGFSLSSDGVLVTSRPFDRERNPLFHIH
IVVQDAGKPPMSSTTMLHVKVLDENDNAPLQRNINILVKYYGSSFPGGLIGNVRPSDQDE
LDVFNCTIKNGPLRMFSFPFGMCNLWSSPYQGEATYNISVEGSDQLHPSVNNSIYVNYKG
FTNVSLDNCVLFYISISTLEEFLSLKYLKFVKALDSLFNLQASKTHVFGMKLQGDKMLLL
AAVKSYNGQYLTGEVASGISNMHKKLLEAQSNVTIFQITSDPCMLRPCHNGATCNRNIHI
SQEVAVLESSSLIFVSPYFVEIFNCSCRAGFTGDACELDFDECTKEPCKNGGSCYNNPGT
YFCQCKDGFSGSHCTIVDNECQSVNCLNGGTCWNRQGGFICDCSPGYEGTFCDHIVDHCG
SSPCVYGTCSSFLTGYSCQCPFGVSGVDCEKHSYGFQELSYIEYPPLDPAYNFIYLEFAT
VQQNALLVYNHGDPSTSDFLALEIVSGRLCLSYDLGSGVIRLETGKIVVDGSFHNITVRR
TGNIASLEIDNCSVDDPQGFCLSQNGATGTQRTLEVSSNNMTFGGVKSIDGILQRQIRTH
NFVGCMSNMQVNNFSPDSLKSLASQNVLNRCPQRDIPPCETAVCLNEGVCQDRWSHHRCQ
CRDQFTGPNCAMNLAEQNVLFLNGEAYIEFAVKETYRRNQLLQAILDGEEGDSQGFDSVE
IKMRTVRTNGVLVVCWCQTAHLKLKISDGKPLYVFTNVTSGQRLELSMEGNVSDGQWHVI
QLRRRGSYISLFLDERPVVNTTNGTITHSAFLVETIFLGSAPLRESKDVPGMIQNLGFRG
CVEYIKFNGRLLSFNGYNEIVDASSSPPVFQTFCVSPNHCVLTPCLKDSCLSEPCWNDSD
CGSSSKDDYWCICLHNVSSCGPCLSDKVHSEACSQTQKSAPLWIVAVIIPIVLILLILVL
CIVLRRQGKTCQGEKRRQIYLMPPSKQHGTDNLAFSLGPADESSQNVSNEACKQPDLIRP
RDPVQGVESCYESGPCCHVSGFGGSELEYYEIDSTYSDVNTLQLKKEDERGDQVNGNPKV
SQSIMQPQTNHNPSPKLHQRTSGGDFHQWQRQSQLFFKRKLDPDLTGPPQHLSADEVEKL
NNPRDHKGYPHQNFRECPIKPCRDGPVETSSESESHCSFTGSEFDCERELSLISSHDKDE
HPPEVADWSRGQFILIAPSPFRDVVKSPSVQSPTSVSGGIQQLENLLNIGVHFNTYADVF
EDIASLQSHQPNDCGFQSDQEEII
NT seq
9075 nt
NT seq
+upstream
nt +downstream
nt
atgatcaagtttggattaatacatctctgtatatttctcatgcacgctacgatattcttc
tatggtgtttgctctatcagttcaccatggacacagtgggataatagtaatgagaaaaag
tggttcaacatctcagctctgccatctacaagcaaatcaggcttagccccacttcatagt
agaaggtttacacaattatccttttccaaatctgtatattcatttgaagtaaaggaagac
acaccacctgggaccattgtgggacatgtggaggcagcatatagtgaagagaatgaaacc
tcggtgtactctgttcaggaggatgatggtgatggtcttttccttctcaatccacattct
ggcgaattcctcctatcccgagctctggattttgagatggagcgctactacatcctgact
gcagcagctcagcagggggagcgtgaactcaccggggtcagagtgtacttcagtgtgatc
gatgtcaatgacaacccaccagtgttcagccagaatgacttttcggcatccataccagaa
gactcacctgttggaatgtgctttctaaatctcaatgttacagatcgggatgagggtata
tttggagaagtggatttgatggtgacatctggaaaccttgagaacaagttctctataaac
cagcatcaaactctatgtataagagggaagttagacagagaaacaaacgctatgtatagt
ctcattgtccaggccaatgatcgtgctctacctacagaggcccgacttacaacctcagtg
catgtcactgtctatcttctggatgtcaatgataactcccctctcatcacaaccccaagt
actgttcgttttccagagaacgcacctcttcattctgttgttacggttatacaggccaca
gatgctgatgctggatccaatggtgaagttgttttcagctttgagagtgcagaagaagaa
ccgtttagtataaatagttcaactggggttgtgtacctgcggaagccattggacagagaa
agtgaggatgttgtcacagtcacactgaacgtcaaagataaaggtgttccttcattgttc
agctcaatgtacctcacagtgcttattgaggatgtaaacgatcacaatccagagttcact
caaagctcctacagtctttcagtttatgagaatgtacctcgtggaacaagcctgctcaga
gttaacgcgagtgatcaagatattgggtcaaatgggcaggtgcgcttctctgtctcagag
agtgagttcatggtagactctgttctaggtgtggtctcggtgaaagacaagatggaccgt
gagaagaagcctttctacatcttttttgtcatagcagaagaccagggagatattcaaagg
tccaccacagcaaccattaacatcgcagtcctggatgttaatgactgtgttcctctttta
tcacctgaatcactgacattgcatgtctttgaaaatggggaagactctactcagcacttt
catcagatacatgcctctgatgaagactctaatgaagttaacggtcagctgacatattct
atagaatcaggaaatgatgaaagtctcttctcacttcatcccaatggaacattccaaatc
ttagaagatcttgatagggaactgaaaagccaatacatgttaaaagttaacgctgctgat
tcaggatttccatcactgactggcacaggcaccttggttattgttgttgatgatgtcaat
gacaacattccaatatttgacagggagtggttcagtactcacatattggaggattctccg
gttgggactgtttttctgagagttgcagcatcagacttagatgatggtacaaatggacag
ctaagatattctttagatgacctagatactcctttttccatcaatgaaacatctggagat
ttattcactgtaagtgccttggacagagagacagagtctttttacagattttcggtgact
gtcactgatggacatcccacaaagcctctttccagttcagctgttgtttcagtaacagtt
gaggatgtgaatgatcacttaccatcctttctctatggaccatatgtggctaatgttcct
gctgggataaccaaaggatcagttgtctgcacagtgatggcagaagatgcagatgctgga
ttgaacgcacaactaaatttttctctgcatggccaacatgcctatctcttatccattaac
tctcgcacaggaacagtgttcattaaagattctgtgaataaaagaaatgatatcacagtt
gaagttcatgtgcaggacggagcagatctaccaaaaatggacacaacaactttgactgtc
agattccagaatgatacatactttcctcatgttgcagtccaagtttataaggacgtcctc
tctgaggattcacccaaagaaaccctggttgctattgtcactgcagaatcacaaagaaac
acaccgatgtctttctatctggcttctggaaactttggggaggtttttgagcttcaccac
agcactggtgtgctgactgtcaaggatcccttagattttgaaagcaacatgcattttcat
ctaatagttgaagccagagactcagggataccgcctttttcatcatatgctgaacttaat
ttgaatatcagtgatgtaaatgataacccaccagtgttctcgcaaaacatctacagatgt
gaagtgtatgagaacttggcttcaggaagggtgtgtaatgtgttagcaactgatgcagac
tctggagtgtttgcagaggtggagtattttattttggctggtaacattgagggtgcattt
aaaatagacaaaattcatggcattctttccacaacaaaacgtttggatcgagaaaaaata
ccatattataatcttaccctgaaggccattgataaagaaaacaacagtctttcagccatc
gcaacagttatcattatagttcttgatacaaatgatcatgcacctcgtttctcacagatt
ttcatcacagaggttcctgaggatgctcctcttggctttccagtcattcagatagctgct
acagatgaagatgttggtctaaatgctgtaattgaatacacaatcattggccaaaatagt
gaattcccgtttagtattgataaaaccacaggcattttactagtacttcatcctttggac
agagaagatcaaaatcactatatagtaaaggttaacgcaaatgattctgcttggagcatc
agcacagacgtcaccatagacattacagatgtcaatgacaacacgccgatcttctatcaa
ccacgttacactctcactgttcctgagatgaagatgcatgaagttttccttctccaaatt
agcgctactgaccgggatcttggtgagaatgcccaaatcctttacttcattgacccacca
aatgaactttttttggttaatgcatcaactgggaaaatttcaaccaaacaacccattgtt
ctccatgaatctgaatctgtaaatttgactttcactgttgtggcgtctgattgcggcagt
gttcctttgaacagctctagcattgtttcagtgacattagtacggcataatcaattccca
ccctcgtttatacccttcaggcctttagtaccagttcctttaaccctggacgttggaaca
gaagtgatccaaatatctgctatagatcaagattctcttgtaaggaacaacagtgttgag
tacttcaatagtggtggcaatggatctctttactttgaggtagaacataacagcggaaga
gtgctggtaaataaaactttagcaaatagccttggcaccatcctaacacttcaaatcact
gccaaagataaaggccttcctcctttttttgcacagactgaaatcagttttgaagttaca
catgagaacctttttgcaccacattttcttaacagaaaagtggagttttttgttccggaa
gatttgcccattggttcagttattggaaaaatccagggcaaagataaagatgctggcatc
aatggtgttatttcctattcttttgatggtgggaatgaaaatggattgttttccatagga
caatcttcaggattgataatgcttgttaaagcacttgactttgaggaatttgaaactcat
catctaaacgtcattgctgaggatggaggctggcgtcccaagatggagagaattaatatc
acagtatatgtaacagatttaaacgataaccctcctttatttacatccacaaattacatt
gccacagtttcagaaaatgctttaattggtacctcagttttgcaggtttgggcgaaggat
gctgacacaggaattcactcccaaatcacatatacgcttattgccggagacatccttctc
ttctatttggacaccaaaaatggcacaatcaccactttagatatatttgattatgagcaa
aaacagcattatgaacttacagtcaaagccaccaacatcgggtttccatatttgtttgat
attgcccgtatacacatccagatcgctggcctcaatgaattcatccctgcttttcaaaga
catatatataacttcacagtgtcagaggctttgccaccacaaactgaaataggaagggtt
gttgccattgactatgaccaagggcctgatggagaagtgttttatgtgcttgctggacaa
agtaaaaaagctaattttgtggtggatgagcatacgggaataatatatgtctctaaagat
ttgaaaaatcgcctccaaaataatgaaatcctacgggtgctggcaaaaaacagaggggct
attacaggatttaatgttgatgagacattgatacatctagacatactagatgaaaacgat
ccccctaattttgattcaatgctttacactgcaacagtgtcagaggacatctcgattggg
acatccgtaactaaagtcaaagcggtggaccaggatgtgatcatagaatggagcaggttt
tcttatagcattgaacatggaaatatcaatagttccttcattatagatcccgtcagtggg
gtaatttccattaacagtcacctggatagagaaatgtgggccttctataacctgactgtc
attgctgttgacgagggctctcctgctgtaaccggaagcactaaggtagctatcgtcgtt
tctgatgtcaatgacaatcctcccaaactgctgaccacagaagggtttattcgagaaaac
caacctgctgggactctggtctccaccttaacagccacagatgatgatcttcctccaaat
caaggtcctttcacgtactggatgatgagacctgctgagggtttttcactctcatctgat
ggcgttcttgttacctcaagaccctttgatcgggagcgcaaccctctttttcatatacat
attgtggttcaagatgctggtaagccaccaatgtcctccaccactatgttacatgttaaa
gttcttgatgaaaatgacaatgcaccgctccagagaaacattaatatattggtgaaatat
tatggaagttccttcccaggaggactaatcggaaatgtaagaccgtccgatcaggacgaa
ctggatgtcttcaattgtacaatcaaaaatgggccacttaggatgtttagtttcccattt
gggatgtgtaatttgtggtcgtccccttaccaaggagaggcaacatataatatttcagtt
gaaggcagtgaccagctccacccttcggtcaacaacagcatctacgtcaattacaaaggt
tttaccaatgtctctctggacaattgcgtgttgttctacatctctatatcaactcttgag
gaatttctgtctttgaagtatttaaaattcgtcaaagctttggatagcctctttaaccta
caagcttccaaaacacatgtgtttggaatgaagttgcaaggagataaaatgctgcttctt
gctgcagtgaaaagctacaatggtcagtatctaactggagaggtggcaagcggaatatca
aacatgcataaaaagttactggaagcacaaagcaatgtgactatattccaaataaccagt
gacccatgtatgctccgtccttgccataatggtgccacctgcaacagaaacattcacatc
agtcaggaagttgctgtgttggaaagctccagtcttatatttgtttctccatattttgtg
gagatctttaactgctcttgtcgagcaggctttacaggtgatgcatgtgagctagacttt
gatgaatgtaccaaggagccttgtaaaaatgggggaagctgctataacaatccaggaact
tatttttgtcaatgcaaagatggattctcaggatcgcactgtactatagttgataatgaa
tgtcaatcagtaaattgtttaaatggaggaacgtgttggaacagacagggagggttcatc
tgtgattgcagcccaggctatgaaggaacattttgtgatcatattgttgaccactgtggt
tcctccccttgtgtatatggaacctgctccagttttctaacaggttactcttgccaatgt
ccatttggtgtgagtggagttgattgtgaaaagcacagttatggctttcaggaactttct
tatatagaatatcctccattggatccagcatataacttcatctatttggaatttgcgact
gttcaacaaaacgccttgcttgtgtacaaccatggtgacccatcaacttcagacttcctg
gcccttgaaatagtgagtggaagactgtgcctgtcttatgatcttggatctggagtcata
cgattggaaacaggcaagatagtggttgatggaagttttcacaacatcaccgtaagaaga
actggaaatatagcctctcttgaaatagacaactgctctgtcgatgatccacaaggattt
tgcttgtcgcaaaatggtgccactggaacccaaaggactctggaagtgagctcaaataac
atgacgtttggtggcgtaaagtccattgatggcattttacaaaggcaaatcaggactcat
aactttgttggctgtatgagtaacatgcaagtgaacaacttcagtccagattccttaaaa
tctttggcgtcccagaatgttcttaatcgatgtccacaaagagatattcctccatgtgaa
accgcagtgtgtttgaacgaaggagtttgtcaagaccgatggtcgcaccatcgctgccag
tgtagagaccaattcacaggacccaactgtgccatgaatttggctgagcagaatgtattg
tttctaaacggcgaggcctacattgagtttgccgtcaaggaaacctacagaagaaaccaa
cttctccaagccatcctggatggggaggaaggagactctcagggatttgacagtgttgag
atcaagatgaggactgtcagaacaaatggcgttttggttgtgtgctggtgtcaaactgct
catctgaaacttaagatatcagatggaaaacctctgtatgtgttcaccaatgtcacatcc
gggcagcggctagagctctcaatggagggaaatgtatccgatgggcagtggcatgtgatt
cagctgcgcagaagaggctcatacatctctctgtttctggatgaacggcctgtagtgaat
accaccaatggcaccataactcactccgcattcttagtggagaccatttttctgggctct
gctccactgagagaatccaaagatgtcccagggatgattcaaaatttaggtttcagaggc
tgtgtggaatacatcaaattcaatggtcgcctcctgtccttcaatggctacaatgagata
gttgatgccagctccagcccacctgtcttccaaaccttctgcgtatctccaaaccactgc
gttctgactccatgtctgaaggattcctgtctatctgagccctgctggaatgatagtgac
tgtgggtcttcttccaaagacgactactggtgcatctgtctgcacaatgtgtcctcgtgt
ggaccttgcttatctgacaaagtccacagcgaggcctgttctcaaacccaaaagagcgcc
cccttatggattgtagcagttattattcccattgtccttattcttctgatcctagttctc
tgtattgtccttagaagacaaggcaaaacctgtcagggtgaaaagaggcgtcaaatctac
ctcatgccaccaagcaaacagcatggcacggataacctggcatttagtttaggccctgct
gatgagtcttctcagaatgtctcaaatgaagcctgcaagcaacctgatctaataagacca
agggatcctgtgcaaggagtggaaagctgttatgaaagtggaccttgttgtcatgtctca
ggttttggagggagtgaactggagtactatgagattgacagcacatactcggatgtgaac
accctacagctgaagaaggaggatgaacgtggagatcaggtgaatggcaatccaaaggtt
tcgcaatccatcatgcaacctcaaacgaatcataatccatctcctaaacttcatcagaga
acatccggaggtgattttcaccagtggcaacgtcaatcccaattgttcttcaagagaaaa
ctggatcctgatctgacaggccctccacaacatctctcagcagatgaagttgagaaactg
aacaacccacgggaccacaagggatacccccatcagaatttcagagagtgtcccataaag
ccatgcagagatgggccagtagagacatcatcagagagtgaaagccactgctccttcacc
ggctcagagtttgactgtgagagagaactgtcactcatcagctcacacgacaaagatgaa
catccacctgaagttgcagattggtccagaggacagtttattctgatagccccttcaccc
ttcagagatgtggtcaaatccccctccgtccagagtcccacctctgtctcaggcgggatc
cagcagcttgagaatctcctaaatataggagttcattttaacacctatgcggatgtgttc
gaggacatagccagcttacagagccatcagccaaatgactgtggatttcagagtgatcaa
gaggaaatcatttga
DBGET
integrated database retrieval system
