Carassius auratus (goldfish): 113058797
Help
Entry
113058797 CDS
T07313
Name
(RefSeq) autophagy-related protein 16-1-like isoform X1
KO
K17890
autophagy-related protein 16-1
Organism
caua
Carassius auratus (goldfish)
Pathway
caua04136
Autophagy - other
caua04140
Autophagy - animal
caua04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
113058797
04136 Autophagy - other
113058797
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
113058797
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
caua04131
]
113058797
03029 Mitochondrial biogenesis [BR:
caua03029
]
113058797
Membrane trafficking [BR:
caua04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
113058797
Others
Specific organelles associated proteins
Auto phagosome
113058797
Mitochondrial biogenesis [BR:
caua03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
113058797
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG16
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
EIF3I
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_DCAF4
Beta-prop_SCAP
WDR90_beta-prop_4th
Beta-prop_EIPR1
Beta-prop_IFT122_1st
NBCH_WD40
WD40_RFWD3
Beta-prop_NWD2_C
eIF2A
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_WDR19_1st
PUMA_CC
Ge1_WD40
KASH_CCD
DUF4200
PspA_IM30
Beta-prop_DCAF12
DUF6212
Tup_N
HALZ
HEF_HK
Lipoprotein_6
NET2A
Motif
Other DBs
NCBI-GeneID:
113058797
NCBI-ProteinID:
XP_026082796
Ensembl:
ENSCARG00000043993
UniProt:
A0A6P6LH31
LinkDB
All DBs
Position
40:complement(19431639..19451008)
Genome browser
AA seq
620 aa
AA seq
DB search
MAGRRVECLWKHHVMEQLKQRDRVQRQAFEEIIHQYNRLLERSDLQVVFSERLQTEKYEH
QNRHDLSPGVEGGRSDSLQQEMAQMRIKHQEELTELHKKRGELAQSVIELNNQIQQKDKE
IQSNEAKMQEYQHQISHLEGECRDLRNSLADLERANQTLRDEYDALQITFSALEEKLRKT
TEDNQELVTRWMAEKAQEANKLNAENEKDTRRRQAKLQKDLAEAAKEPLPIEPDDDIEVL
SEDAGKATGETSPSRQTSRTPSRRASQPPPAGLLDSISNIFGLSDSVQPGLVPSDSRRRR
SVNSFGSSPESAEVPSSCADVRVPSTALHVFDAHDGEVNAVRFSPGSRLLATGGMDRRVK
LWEVASGRCEPKGALTGSNAGITSIEFDSAGSYLLAASNDFASRIWTVDDFRLRHTLTGH
SGKVLSARFLLDYTRIVSGSYDRTLKLWDLRSKVCMKTVFAGSSCNDIVCTEQCVMSGHF
DKKIRFWDIRSESTVHELELLGRITSLDLNHDRTELLSCSRDDLVKIIDLRSNAVRQTFN
AQGFKCGSDFTRVTFSPDGSYVAAGSADGVLYIWNVLTGKLDKTLDKGHSSAINSVSWSP
SGVYVASVEKGSKAVLWSDM
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atggcgggccgtagagtcgagtgtttgtggaaacatcatgttatggagcagctgaagcag
agagacagagttcagcgtcaggcctttgaggagatcatacaccagtataaccggttgtta
gagaggtctgatcttcaggttgttttttctgaacgtctccagaccgagaaatatgagcat
cagaaccgacacgacctcagtccgggcgtcgagggcggtcgcagtgattccctgcagcag
gaaatggctcagatgagaattaaacatcaagaggagctaacggagctgcacaagaaacga
ggagagttggctcagagcgtgattgaactaaacaaccagattcagcagaaagacaaagag
atccagagtaatgaagccaagatgcaggagtatcagcatcagatctctcatctggaagga
gagtgtcgcgatctgcgcaactctctggccgatctggaacgagccaatcagacgcttcga
gacgagtacgatgccctgcagatcacgttcagcgctctggaggagaaactacggaaaacc
acagaggacaatcaggagctggtgacacgctggatggccgagaaagcgcaggaggccaac
aaactcaacgctgagaacgagaaggacaccagacgcagacaggcgaagcttcagaaggat
ctggcggaagcagcgaaggaacctcttcctatagagccagatgatgacatcgaagttctc
tcagaggatgctgggaaggcaacgggtgaaacgtcaccgagcagacagaccagtcgcaca
cccagcagacgagcgtctcagcctcctcctgctggactgctggattccatctctaatatc
tttggcttgtctgattctgtccaacctggtctcgtcccatctgactccagaaggcgtcgc
tcggtgaattcgttcggctcgtctcctgaaagcgcggaggtgccgtcatcctgcgctgat
gtccgagttccctccactgcgctccacgtctttgacgcccacgatggagaagtgaacgcc
gtgaggttcagtcctggttcccgtctgcttgccacgggaggaatggaccgcagggtgaag
ctctgggaggtcgcttctgggcgttgtgaacctaaaggtgcgctgacgggcagtaatgct
ggaatcaccagtatagagtttgacagtgcgggctcgtatctactggctgcgtcgaatgat
ttcgccagcagaatctggacggttgatgacttcaggctgaggcacacgctcacagggcac
agcgggaaggttttatctgcacggtttctcctcgattacactcggatcgtctccggcagc
tacgatcgaacgctcaagctctgggatttacgcagcaaagtctgcatgaagacggtgttt
gctggctctagctgtaatgacatcgtctgcacggagcagtgtgtgatgagcggacacttc
gataagaagattcgtttctgggacatcaggtctgagagtaccgttcatgagctggagctg
ctgggacgcattacatctctggatctcaatcacgaccggaccgagctgctgagctgctct
cgtgacgatctggtgaagatcatcgatctgcgcagtaatgcagtgcgacagacgtttaat
gctcaaggcttcaagtgtggttcagacttcaccagagtcacgttcagtcctgatgggagt
tatgtggcggctggttctgcagacggcgttctgtacatctggaacgttctgacggggaaa
ctagacaagacccttgataagggtcacagttctgccataaactcggtgtcctggtctcca
tcgggtgtgtacgtggccagcgttgagaaaggaagcaaggccgtgctctggtctgacatg
tga
DBGET
integrated database retrieval system
