Carassius auratus (goldfish): 113059108
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Entry
113059108 CDS
T07313
Name
(RefSeq) sorting nexin-27-like isoform X1
KO
K17936
sorting nexin-27
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
caua04131
]
113059108
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
caua04990
]
113059108
Membrane trafficking [BR:
caua04131
]
Protein recycling
Others
Others
113059108
Domain-containing proteins not elsewhere classified [BR:
caua04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
113059108
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PX
PDZ
RA
PDZ_6
RA_2
SNX17-27-31_F1_FERM
VirE3
SNX17_FERM_C
USP7_C2
PDZ_2
SNX17-31_F2_FERM
DUF5394
Sina_TRAF
DarA_N
Motif
Other DBs
NCBI-GeneID:
113059108
NCBI-ProteinID:
XP_026083157
Ensembl:
ENSCARG00000018745
UniProt:
A0A6P6LI30
LinkDB
All DBs
Position
41:17403712..17421680
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AA seq
569 aa
AA seq
DB search
MADVVEGDGTCSAGPSTLHSAALNGSGMSSGTCAGGIVATTVTSGPRLVRIVKSDSGYGF
NVRGQVSEGGQLRSINGELYAPLQHVSAVLPGGAADRAGISKGDRILEVNGVNVEGATHK
QVVDLIRAGEKELVLAILSVPQPEMDSLDPGDDGSSQSCYDYSDKQAVPISVPTYKHVEQ
NGEKFVVYNVYMAGRQLCSKRYREFAILHQNLKREFGNFVFPKLPGKWPFSLSEQQLDAR
RRGLEEYLEKVCSVRVIGESDIMQEFLSESDENYNGVSDVELRIAMPDKTTVTIRVRKNC
TTDQVYQAVVTKIGMDSITASYFALFEVINHSFARKLAPNEFPHKLYVQNYTSAIPGTCL
TLRKWLFTTEEEILLNDNELAINYCFHQALDDVKKGFIKVAEKSYQLQKLTEQRKMTMYL
SILRTCEGYNEITFPHCSCDSRRKGHVVTAISIRHFKLHACTEDGTLENQVIAFEWSEMQ
RWDTDEEGMAFCFEYARGEKKPRWVKIFTPYFNYMHECFERVFCELKWRKEVEEEAIDKD
NKNCSKDEYLPSVETQKGWRHMNEEIISS
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atggcagatgttgtcgaaggagacggcacttgctccgctggtccttccacgcttcactcg
gcggctctcaacggctccggcatgagctcggggacctgcgccggcggcatcgtcgcgacc
acggtcacctccgggcctcggctggtccgcatcgtcaagtcggactcgggctatggcttc
aacgtccgcgggcaagtaagcgaaggagggcaactaaggagcatcaacggagaactttac
gccccgctgcagcacgtcagcgccgtgttaccgggcggcgcggcagaccgagccggaatc
tcaaagggcgaccgtattcttgaagtaaatggggtgaatgtggaaggggccactcataag
caggtggtagatctcatccgagcaggagagaaagagttagtcttggccatcctgtcggtt
cctcagccagagatggacagccttgatcccggggacgatggctcatctcagtcctgctat
gactacagcgacaagcaggccgtgcccatctccgtgcccacctacaaacatgtggaacag
aacggagagaagtttgtagtctacaacgtgtacatggcaggcaggcagttgtgctcaaag
cgttatcgggagtttgccatcttgcatcagaatctgaagagggaatttggcaactttgtg
tttcccaagctgccggggaaatggcctttctccctgtctgagcaacagctagacgctcgc
aggcgagggctggaggaatacttggagaaagtgtgttctgttcgggtaatcggagagagt
gacatcatgcaggagtttttgtcggagtctgatgagaattataatggtgtttctgatgtg
gagctaaggatagccatgccagacaaaactacagttacgatccgggtgcgaaagaattgc
acaacagaccaggtctaccaggctgttgtaacaaaaattgggatggacagcattactgca
agttattttgctctgtttgaagtcattaaccactcctttgcacgcaagctggcccctaat
gagttcccacataagctgtatgtgcagaactatacatctgccatcccaggcacctgcctc
acacttcgcaagtggctcttcaccacagaagaagagattctgctcaacgacaatgagctg
gccatcaactattgctttcatcaggctctggatgatgtgaaaaagggattcatcaaagtg
gcagagaaatcctaccagctccaaaagctcactgaacagaggaaaatgaccatgtattta
agtattctgaggacttgtgagggctacaatgagatcactttcccgcactgctcctgtgac
tcacgtaggaaaggtcacgttgttacagcgataagcatccgccactttaaactccatgcg
tgcaccgaggatggcactctagagaatcaggtgatagcttttgaatggtcggagatgcag
agatgggacacggatgaagagggaatggctttctgtttcgagtacgcgcgaggggagaag
aaacctcgctgggtcaaaatcttcactccatatttcaactacatgcacgagtgcttcgag
agagtcttctgtgagctcaaatggagaaaagaggttgaggaggaggccatagacaaggac
aataagaactgcagtaaagatgaatatcttccatctgttgagacacagaagggatggagg
cacatgaacgaagagatcatctcctcttga
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