Carassius auratus (goldfish): 113059120
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Entry
113059120 CDS
T07313
Name
(RefSeq) integrin alpha-8-like
KO
K06584
integrin alpha 8
Organism
caua
Carassius auratus (goldfish)
Pathway
caua04510
Focal adhesion
caua04512
ECM-receptor interaction
caua04514
Cell adhesion molecule (CAM) interaction
caua04810
Regulation of actin cytoskeleton
caua04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
113059120
04514 Cell adhesion molecule (CAM) interaction
113059120
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
113059120
09142 Cell motility
04820 Cytoskeleton in muscle cells
113059120
04810 Regulation of actin cytoskeleton
113059120
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
caua04515
]
113059120
Cell adhesion molecules [BR:
caua04515
]
Integrins
Integrin alpha subunits
113059120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP
FG-GAP_3
Integrin_alpha
ITGAX-like_Ig_3
Motif
Other DBs
NCBI-GeneID:
113059120
NCBI-ProteinID:
XP_026083172
Ensembl:
ENSCARG00000019599
UniProt:
A0A6P6LI43
LinkDB
All DBs
Position
41:17667708..17729374
Genome browser
AA seq
1048 aa
AA seq
DB search
MHPCVFRVCFRRGLLIFSVLCEAAAFNLDLEKPTVYNGPEGSYFGYSLDFYHPTQDRNAM
SVLVGAPKANTSQPGIVEGGAVYYCPWPATDPDSCRQIPFDKANNRMVKVNGTREPLEFK
SHQWFGATVRTHKGKVVACAPLYHWRTVKVSSEMDPVGTCYVAVQNFSAYAEYSPCRTNN
PDPEGQGFCQAGFSVDFTKEGTLVVGGPGSFYWQGQVITAGVAEILNGYSLKTILRKVQG
EKQTVAASDTYDDSYLGYSVAVGEFTGDSEQELVAGVPRGAHNFGYVAVINTTNLTFIQN
FTGEQMASYFGYTVAVTDLNGDGLDDVLVGAPLYMDREFESKPREVGRVYLYLQEDVLLF
SPPITLTGTHLFGRYGSAIAPLGDINQDGYLDVAIGAPFAGEDRGGRVFIYNGQKSGLML
QASQVLKGEWASSAIPAGFGFTLRGDSDLDNNQYPDLLVGAFGVSKVVAYRARPVVTVDA
QLILTPRILNPEDKSCCMPNSDLMVTCLSVNVCAKISGIGIPDYVALRMDLQLDWLKQRG
AVKRILFMDSHQHQRTQQLVLGQGDRQHCHNYTVYLRDEGEFRDKLSPISVTLNYSLDQD
SPPPGLQLRPILDHYSKTFHHEQANILLDCGEDNMCIPDLKLSAKMDRTELIIGDDNLLV
LIINAANRGEGAYEAELHVTLPPEADYIGVERRREDLQRLNCEHRTENDTRVVVCDLGNP
MVAETNLSVGLRFSVQRLEDAPPSIGFELQIHSSNKDNSRSVLVNLTLSIAARAQVEIRG
VSHPAQVVLPFPRWEPKEKPVREDDVGPQVQHIYELHNKGPSSISRTVLEVGWPSWYREE
HLLYALQIITDGPVHCSVNGSLNPLKLETSTLRDTPELLGFLRNSSGPTRHRRSVSAAQS
YNSKILNCSNINCLMVECVVDRLDQGQSAVIKFRSRLWAHTFLQRRNDHYTLNSTVSFQV
MSMPYRIKADSLPHQSKSIGTFVVWAIPNVSFAIPLWVIILAILLGLLVLAMLSLAMWKC
GFFDRARPPKDSDVSDREQLTAKKSTDA
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atgcacccttgtgttttccgcgtgtgttttcgtcggggtttgctcatattttcagtttta
tgcgaagctgctgctttcaacctggatttggaaaagccaacggtttacaatggaccagag
ggaagttactttggatactcactggacttttaccacccaacacaggatagaaacgccatg
tcggtgctggttggggctcctaaagcgaacacctctcaaccagggattgtggagggagga
gcggtgtactactgcccctggccggcaacagacccagactcctgccgccagatccccttt
gataaagcaaataaccgaatggttaaagtgaacgggacacgggagcctctagaatttaaa
tcccatcagtggtttggagccacagtcaggacccacaaaggcaaagtggtggcttgtgca
cccctctatcactggaggacagtgaaggtcagcagtgagatggatccagtgggaacttgt
tatgtggctgtccagaactttagtgcctatgctgaatattcaccatgtcgaaccaataac
ccggaccccgagggccagggcttctgtcaggcaggcttcagtgttgatttcactaaggaa
gggactctggttgtgggagggccagggagtttctactggcaaggtcaagtgatcactgca
ggagttgcagaaatattgaacggctattccctgaaaactattctgcgcaaagttcaggga
gagaagcagactgtggctgcatcagacacatatgatgacagttacctaggttactctgta
gcagtaggagagtttacaggtgattcagaacaagaactggtagcaggggtacctcgaggg
gcacacaactttggttatgtggctgtaatcaacacaacaaacctgacatttattcagaat
tttactggggagcagatggcctcttattttggatacactgttgcagtgactgatctaaac
ggagatgggctagatgacgtgctagttggagctccactctacatggaccgtgagtttgag
agtaaacctcgtgaggtgggccgtgtgtacctgtacctgcaagaggacgtgcttctcttc
tcccctccaatcacactcactggaacacacctgttcggccggtatggaagtgccatcgcc
cctctcggagatatcaaccaggatggctatctggacgtggcaataggggctccattcgca
ggggaagatcgtggtggcagggtcttcatctataacgggcaaaaatctgggctgatgtta
caggcatctcaagtgctgaaaggtgaatgggcctcatccgccatcccagcaggctttgga
ttcaccttgcgaggagattctgacctcgataacaaccaataccctgatttgctggtcggt
gcattcggagtgagtaaagttgtggcctacagggcgaggccagtggttacggtggacgct
cagctgattttgacacccagaattctcaatcctgaggacaagtcctgctgcatgcccaat
tctgatcttatggtaacctgtctctcagtaaatgtgtgtgcaaagatctctgggattggt
attcctgattatgtagctctgagaatggacctgcagctggactggctgaagcagcgtgga
gcagttaagaggatcttgttcatggactctcaccagcaccagagaacccaacagttggtt
ttgggtcaaggggaccgccaacattgccataactacactgtttacctgcgggatgaggga
gaattcagagataaactgagtcctatcagcgtgacactgaactacagtctggaccaggac
tcccctccacctggcctccagctgcggcccattttggaccactacagcaagaccttccac
catgagcaggcaaacatcctgttggactgtggtgaagacaacatgtgcatcccagatctt
aaactttctgctaaaatggaccggactgaacttataatcggggatgacaacttgcttgtg
ttgatcattaatgcagccaataggggtgagggggcgtacgaggcagagcttcatgtgacc
ctcccaccagaggcagactatattggtgtggagcgcagacgtgaggatcttcagcggctg
aactgtgagcacaggacagagaatgataccagagttgtggtttgtgacctgggaaaccca
atggtggctgagacaaacttgtcagttggtttacggttttctgtacagaggctggaagat
gcccctccttccattggctttgagctgcagatacacagctctaataaggacaactccaga
agcgttctggtgaatttgactctaagcattgcagcgagagcacaggtggagatcagaggt
gtgtctcaccccgctcaggttgtgttgcctttccctcgatgggaacccaaagagaaacct
gtgagagaggatgacgtcggccctcaggttcaacacatatatgagttacataataagggt
ccaagttcaataagcaggactgtattggaggtgggatggcccagttggtaccgtgaggaa
cacctcctgtatgctcttcagatcattacagacggacctgttcactgcagtgttaatggc
tccctaaacccactgaagttagagacctccactcttcgggacactccagaattactgggc
tttctgaggaacagcagcggtccaactcgccatagacgatctgtttctgcagcccagagt
tacaacagcaagattctgaactgctcaaatatcaactgcctgatggtggagtgtgttgtg
gatcgcttggatcaagggcagagtgcagtgatcaagttcagatctcgactctgggctcac
accttcttacagagacggaatgaccactacacgctaaactccacagtgtcctttcaagtg
atgtccatgccttaccggatcaaagctgattcactcccacaccagagcaaatcaattggc
acatttgtggtgtgggccattcctaatgtttcttttgccattcccctgtgggtaataatt
ctggctatactgctgggactgctggtactggctatgcttagcctagcaatgtggaagtgt
ggcttcttcgatcgggcgcgtccacccaaagacagtgatgtgtcagaccgagagcagttg
accgcaaaaaaatcaacagatgcctga
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integrated database retrieval system