KEGG   Carassius auratus (goldfish): 113059232
Entry
113059232         CDS       T07313                                 
Symbol
taf5l
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L isoform X1
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
caua  Carassius auratus (goldfish)
Pathway
caua03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:caua00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    113059232 (taf5l)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:caua03021]
    113059232 (taf5l)
   03036 Chromosome and associated proteins [BR:caua03036]
    113059232 (taf5l)
Transcription machinery [BR:caua03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     113059232 (taf5l)
   Coactivators
    SAGA/TFTC/STAGA complex
     113059232 (taf5l)
Chromosome and associated proteins [BR:caua03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     113059232 (taf5l)
    STAGA complex
     113059232 (taf5l)
    TFTC complex
     113059232 (taf5l)
    SAGA complex
     113059232 (taf5l)
    SLIK complex
     113059232 (taf5l)
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40_Prp19 Beta-prop_IFT122_1st Beta-prop_WDR3_2nd WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 WD40_CDC20-Fz Beta-prop_EML_2 WD40_Gbeta Beta-prop_WDR36-Utp21_2nd WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd EIF3I WDR55 TFIID_NTD2 Beta-prop_WDR36-Utp21_1st Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_TEP1_C Beta-prop_Aladin Beta-prop_WDR75_1st DSE1_N WD40_MABP1-WDR62_1st CFAP251_N NBCH_WD40 ANAPC4_WD40 WDR90_beta-prop_4th Beta-prop_RIG_2nd Beta-prop_IFT140_1st Beta-prop_SCAP PAC11 Beta-prop_WDR41 Beta-prop_NOL10_N Beta-prop_VPS8 RMC1_N Beta-prop_HPS5 Beta-prop_Vps41 ASA1 Beta-prop_DCAF4 Tricorn_2nd Beta-prop_SPT8 WD40_RFWD3 Beta-prop_EIPR1 Beta-prop_IP5PC_F PEP5_VPS11_N Beta-prop_WDR19_1st PROPPIN Beta-prop_WDR75_2nd WD40_like Nbas_N TRIP13_N Cytochrom_D1
Other DBs
NCBI-GeneID: 113059232
NCBI-ProteinID: XP_026083400
Ensembl: ENSCARG00000001144
UniProt: A0A6P6LIX3
LinkDB
Position
1
AA seq 603 aa
MKRVRTEQIQYAVTQYLKRRQYIDTDGSLKGAKLSQSAEEMAASLTVQTESSSVNVVSAA
PCQSDPQQYETQFSRLRCFLQEAEAPLVKEVSGVLFPLFLYLHLDMARCGLKGAVDSFYS
RFHSFFQQDPEQKAIVDLLRGVVTPQDVSSNPKLCSLLDHKYVVHLTDQAYSYLLRYLQS
DDNSAICWVLSSHVQVEVTAAHRTDYQLYGAGTGAGNTTSTSSSSTAWTAGDGAEGAERV
EVTAGLPQNEVALEALQDCIKRVREGPPSLTTVCFYAFQHTDQQLNTAEVSPDSRLLAAG
FDNSAVKLWSLRARKLKAGPHRVDVSKIRLACDVLEEEADDEDASGSEIKTLRAHSGPVY
RTAFLTDGSGLLSCSEDSTIRFWDLNSFTNTVLYRGHAYPVWDVDVSPCSLYFSTASHDR
TARLWSFARTYPLRLYAGHLSDVDCVKFHPNSNYVATGSTDKTVRLWSTQQGASVRLFTG
HRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLFKDLRGHTDSITSLSFSQDSSLVA
SASMDNSVRVWDIRSAHGTAPTDGSSSELIGQYTGSTSNILNVQFMACNLLLVTGTALEK
QEQ
NT seq 1812 nt   +upstreamnt  +downstreamnt
atgaagcgggttcggaccgagcagatccagtacgcagtgacccagtacctgaagaggagg
cagtatatagacacagatgggtctctgaagggggccaaactctcccagtctgctgaggag
atggcagccagtctgacagttcagacggagtccagctctgtgaacgtggtgtctgcagcc
ccgtgtcagtcagacccgcagcagtacgagacccagttctccagactgcgctgcttcctg
caggaagcagaagcaccgttagtgaaggaggtgagcggcgtcttgttcccgctcttcctc
tacctgcacctggacatggcgcgctgtggcctaaagggggcggtggactccttctacagt
cgcttccactcattcttccagcaggaccctgagcaaaaagccatcgtagatctgctacga
ggagtcgtcacgcctcaggatgtgagctcaaaccctaagctctgctcgctcctggatcac
aagtatgtggtgcacctgacggatcaagcgtacagctacctgctgcgttacctgcagagc
gatgacaacagcgccatctgctgggtgctcagctcacacgtgcaggtggaggtgacagca
gcgcaccgaaccgactaccagctgtacggcgcaggcacaggagcaggaaacactacctcc
acttcctcttcctccactgcatggactgcgggggatggggcggagggggcggagcgtgtg
gaggtcacggcagggttacctcagaacgaggtggcgctggaggcgctgcaggactgcata
aagcgtgtgcgagaaggtccgccttcgctcaccaccgtctgcttctacgccttccagcac
acggatcagcagctgaacacggccgaggtgtcaccggacagccgtctgctggcggccggc
ttcgacaactcagccgtgaagctgtggagtctgcgggccaggaagctgaaggcaggacct
cacagggtcgacgtgtctaaaataagactggcctgtgacgtgctggaggaggaggcagat
gatgaggatgcctcgggcagtgagataaagaccctgcgcgctcacagcggtccggtgtac
cgcacggcgttcctgacggacggctccggcctgctgtcctgttcggaggactccaccatt
cgcttctgggacctgaacagcttcaccaatacagtcctgtaccgtggccacgcttacccc
gtctgggacgtggacgtcagtccctgcagcctgtacttctccacggcgtcccacgaccgc
acggctcgcctctggagcttcgcgcgcacctatcctctgcgtctgtacgccggacacctc
tctgacgtcgactgtgtcaaattccaccccaactccaactacgtggcgacgggctccacg
gataaaaccgtacgcctgtggagcacgcagcagggggcgtctgtgaggctgttcacgggg
caccgcggacccgtgctgtcgctcgccttctcacccaacggtaagtacctggcgtcggcc
ggagaggaccagagactgaagctgtgggacctggcgtccggcaccctgttcaaagacctg
cggggtcacaccgacagcatcaccagcctctccttcagccaggacagcagcctggtggcc
tccgcctccatggacaactctgtgcgggtgtgggacatccgcagcgcccacggcaccgcc
cccaccgacggctccagcagcgagctgatcggacagtacacgggcagcactagcaacatc
ctcaatgtgcagttcatggcctgtaacctgctgctggtgacgggcacggcgctggagaaa
caggaacagtga

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