Carassius auratus (goldfish): 113059238
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Entry
113059238 CDS
T07313
Symbol
dcaf13
Name
(RefSeq) DDB1- and CUL4-associated factor 13
KO
K11806
DDB1- and CUL4-associated factor 13
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
caua03009
]
113059238 (dcaf13)
04121 Ubiquitin system [BR:
caua04121
]
113059238 (dcaf13)
Ribosome biogenesis [BR:
caua03009
]
Eukaryotic type
90S particles
Other 90S particles
113059238 (dcaf13)
Ubiquitin system [BR:
caua04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
113059238 (dcaf13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sof1
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
WDR55
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_EIPR1
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT122_1st
WD40_RFWD3
Beta-prop_IFT140_1st
eIF2A
ANAPC4_WD40
KNTC1_N
NBCH_WD40
Beta-prop_DCAF12
Beta-prop_WDR19_1st
DUF6481
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
113059238
NCBI-ProteinID:
XP_026083368
Ensembl:
ENSCARG00000048213
UniProt:
A0A6P6LFH8
LinkDB
All DBs
Position
41:complement(21054274..21062244)
Genome browser
AA seq
445 aa
AA seq
DB search
MKVKVLSRNPDDYVRETTRDIQRVPRNYDPTLHPFEVPREYTRALNATKLERVFAKPFVA
SLDGHRDGISCITKHAKSLSTVISGACDGEVKVWNLPKRECLRTIQAHEGFVRGICSRFC
GTSFFTVGDDKTIKQWNSEAPGYGVREEPINTILGKAVFTGIDHHQRESTFATCGQTVDI
WDEQRSSPIRSFSWGVDSFSCVRYNPVETELLASCASDRSVVLYDTRESAPLRKVIMQLR
SNTLCWNPMEAYYFTCANEDYNLYTYDIRHLDVPVTVHMDHVSAVLDVDYSPTGREFVSA
SFDKTIRIFPKDKGHSREVYHTKRMQHVICVRWSADNKYVLSGSDEMNIRLWKANASEKL
GLLSTREQAAANYNKKLIEKFQHHPQVKRIARHRHLPGDILKQKRELREMREARRRKEKN
VRKHSKPGSVPLLTEKEKHVVAVVE
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgaaagttaaagtgctttctagaaacccggacgattatgttcgagagacgactagagat
atacaacgagtgcccaggaactatgacccgaccctgcatccttttgaggtgcccagggaa
tacaccagggccctaaatgccaccaaactggagagggtgtttgccaaacctttcgtagct
tcactagatggacacagagatggcatcagctgcataaccaaacacgccaaaagtctttca
acagtcatatctggtgcctgcgatggagaggtgaaagtgtggaaccttcctaagcgtgag
tgtttgaggacaattcaggctcatgaaggatttgtacgaggaatctgttcccgcttttgt
ggcacttcctttttcacggtaggagatgacaagaccatcaaacaatggaactcggaggca
ccaggatatggagttcgggaggaaccaattaacacaattctgggaaaggcggtgttcact
ggcattgaccaccaccagagggagagcacgtttgcaacctgcggacagacggtggatatc
tgggatgagcagagaagcagtcccatccgctccttcagctggggtgtggacagcttcagc
tgcgtccgttacaaccctgtggagactgaacttcttgctagctgcgcatcagacagaagt
gtcgtcttgtatgacaccagagaatctgcacctcttcgaaaggttattatgcaattgaga
agcaatacgctttgctggaacccaatggaagcatattattttacctgcgccaacgaagac
tacaacctttatacttacgatataaggcatctggatgttcctgtgactgtgcacatggat
catgtatctgctgtgctggatgttgattattcacctacaggaagagagtttgtatctgcc
agctttgacaaaaccatccgaatctttccgaaagacaaaggccacagcagggaagtgtac
cacaccaaacgtatgcagcatgtcatctgtgtgagatggtccgctgacaacaaatatgtc
ctgagcggctctgacgagatgaacattcggctgtggaaagccaacgcctcggagaagctt
ggactgctctccacccgagaacaagccgccgcaaattacaacaagaagctgatagagaaa
tttcagcaccatccacaggtgaaacgaatcgcccgtcaccgccacctacctggagacatc
ctgaagcagaagagagagctgcgggaaatgagggaagcccgccgcaggaaggaaaaaaat
gtccgcaagcacagcaagccgggatctgttcctctgctgacagaaaaggagaaacatgtg
gtggctgttgtggagtga
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