KEGG   Carassius auratus (goldfish): 113059419
Entry
113059419         CDS       T07313                                 
Name
(RefSeq) WD and tetratricopeptide repeats protein 1-like isoform X1
  KO
K11807  WD and tetratricopeptide repeats protein 1
Organism
caua  Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:caua00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:caua04121]
    113059419
Ubiquitin system [BR:caua04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     113059419
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 EIF3I WDR55 WD40_MABP1-WDR62_2nd Beta-prop_EML WD40_RFWD3 Beta-prop_WDR75_1st ANAPC4_WD40 TPR_19 Beta-prop_HPS5 Beta-prop_WDR90_POC16_2nd Beta-prop_IFT122_1st TPR_2 Beta-prop_RIG_2nd Beta-prop_WDR35_TULP_N Beta-prop_SPT8 Beta-prop_EIPR1 ANAPC3 Beta-prop_WDR19_1st Beta-prop_SCAP TPR_1 TPR_6 Barstar TPR_17 TPR_14 TPR_16 TPR_9
Other DBs
NCBI-GeneID: 113059419
NCBI-ProteinID: XP_026083679
Ensembl: ENSCARG00000058941
UniProt: A0A6P6LGE6
LinkDB
Position
41:complement(25820688..25829656)
AA seq 672 aa
MTCCETMTLRSVTRDLLRRQIQENRTLDFQRHHHVTDPFIKRLGLEAELQGHSGCVNCLE
WNERGDLLASGSDDQHAIIWDPFRHSKLITMHTGHTANIFSVKFLPHSEDRILITGAADT
KVHVHDLTAKETTHMFSDHTNRVKRIVAAPMWPNTFWSAAEDGIIRQYDLRESSKRSEVL
IDLTEYCGQLVEAKCLAINPRDNNYLAVGANGPFVRLYDIRMIHNHRKSLAQSASAGVHT
FGDIQKSIPDGAGQYYVAGHLPVKLPDYNNRLRVLVATYVTFSPDGTELLVNMGGEQVYL
FDLTFKQRPYTFLLPKKCHTSSAEVQNGKTTNGVSNGIHLPASRLKLAKVSSDLPPHLER
IKLQANEAFARQQWTRAIQLYSLGIHEAGHNAMLYGNRAAAYMKRKWDGDHYDALRDCLK
ALSLNPAHLKAHFRLARCLFELKYIAEALECLDDFRSKFPEQAHSSACDALDRDIKAALF
SKTDSSDDKKGNSSVRFHNFSRKESIPEDEIVLRERSFDYKHRYCGHCNTTTDIKEANFF
GSKGQYIVSGSDDGSFFIWEKETTNLVRILQGDESIVNCLQPHPSFCFLATSGIDPVVRL
WSPRPESEEKENGRVVEDMEGAAQANQRRMNADPLEVMLLNMGYRITGLSSRGTEGSDED
ESSESQVQCRSS
NT seq 2019 nt   +upstreamnt  +downstreamnt
atgacgtgctgcgagaccatgaccctgcggagcgtcacgcgtgatctcctgcgccgccag
atccaggagaaccgcactctggacttccagagacaccatcatgtgaccgacccgtttata
aagcgtctggggctggaggcggagctacagggtcactctggctgtgtgaactgtctggag
tggaatgagagaggagatctcctggcctcgggttcggatgaccagcacgccatcatctgg
gatccgttccggcactccaagctcatcacgatgcacacgggacacacggccaacatcttc
tccgtgaagttcctgcctcactccgaggaccggatcttaatcacaggagccgccgacact
aaggtgcacgtgcacgacctgacggcgaaggagaccactcacatgttctcagaccacacc
aaccgcgtcaagcgcatcgtagcggcgcccatgtggcccaacaccttctggagcgccgcg
gaggacgggatcattcggcagtatgatctgagagagagcagtaagcgctccgaggtgtta
atcgatctgacggagtactgtgggcagctcgtggaagccaaatgtctggccattaaccct
cgagacaacaactacctggctgtgggagccaacggacccttcgtccggctctacgacatc
agaatgatccacaatcacaggaagtctttggctcagagcgcctcagccggtgttcacacg
tttggtgacatacagaagtcaataccagacggcgcgggacagtactacgtggcaggtcac
ttacctgtgaagcttcctgattataacaacagattacgagttctggtggccacctacgtc
acattcagtcctgacggcaccgagctgctggtgaacatgggaggagagcaggtgtattta
tttgacctgacgttcaaacagagaccgtacacctttctgctgcccaagaaatgccacaca
tcatcagcagaggtgcagaacgggaagacgaccaacggtgtgtccaatgggattcatctt
cctgccagccgcctcaaactggctaaagtctccagtgatcttcctcctcatctggagcgg
atcaagctgcaggctaacgaagcgttcgcgcgccagcagtggactcgagccatccagctc
tacagtctgggcatccatgaagccggacacaacgccatgctgtacggaaaccgcgccgcc
gcgtacatgaagaggaagtgggacggagatcactacgacgcgctgcgtgactgtctgaag
gccttgtctctgaacccggctcatctgaaggcacacttccggttagcacgctgcctgttc
gagctcaagtacatcgccgaggctctggagtgtctggatgacttcaggagcaagtttccg
gagcaggcgcacagcagcgcatgtgacgcgctcgacagagacatcaaggcggccctcttc
tcaaaaacagactcctctgacgacaagaaggggaacagctccgtccgcttccataacttc
agccggaaggagtccatcccagaggatgagattgtgctgagagagcgcagcttcgactac
aagcatcgctactgcggacactgcaacaccaccacggatattaaagaagccaacttcttc
gggagtaaaggccagtacatcgtgagcggttcagacgacggctcgttcttcatctgggag
aaagagaccaccaacctggtgcggatcttacagggggacgagtctatagtgaactgtctt
cagccgcaccccagcttctgcttcctggccaccagcggcatcgaccccgtggtgcggctc
tggagccccagacccgagtcggaggagaaggagaacggtcgggtggtggaggacatggag
ggcgcagctcaagccaaccagaggcgcatgaacgcagatccgctggaggtgatgctgctg
aacatgggctaccgcatcacgggtctgagcagccgaggcacggagggctccgatgaggac
gagagctcggagagccaggttcagtgccgctccagctag

DBGET integrated database retrieval system