KEGG   Carassius auratus (goldfish): 113059487
Entry
113059487         CDS       T07313                                 
Name
(RefSeq) LOW QUALITY PROTEIN: ubiquitin-like protein ATG12
  KO
K08336  ubiquitin-like protein ATG12
Organism
caua  Carassius auratus (goldfish)
Pathway
caua04068  FoxO signaling pathway
caua04136  Autophagy - other
caua04140  Autophagy - animal
caua04621  NOD-like receptor signaling pathway
caua04622  RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:caua00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04068 FoxO signaling pathway
    113059487
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    113059487
   04136 Autophagy - other
    113059487
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    113059487
   04622 RIG-I-like receptor signaling pathway
    113059487
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:caua04131]
    113059487
   04121 Ubiquitin system [BR:caua04121]
    113059487
   03029 Mitochondrial biogenesis [BR:caua03029]
    113059487
Membrane trafficking [BR:caua04131]
 Autophagy
  Autophagosome formation proteins
   Atg12 conjugation proteins
    113059487
Ubiquitin system [BR:caua04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitin-like proteins (UBLs)
   113059487
Mitochondrial biogenesis [BR:caua03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    113059487
SSDB
Motif
Pfam: APG12 ATG8
Other DBs
NCBI-GeneID: 113059487
NCBI-ProteinID: XP_026083798
UniProt: A0A6P6LGR2
LinkDB
Position
41:complement(5969480..5971051)
AA seq 90 aa
MRVIDVLLKAVSDAPIMKTKKRSVERGRTVQSLAQFISLFLKLDPSEQLFIYVSQSFSPS
PHQEVGVFFECFGSDGKLCVLRYCKSQAWG
NT seq 273 nt   +upstreamnt  +downstreamnt
atgagggtgattgatgtgctgttgaaggcagtcagtgatgcgcccatcatgaagaccaaa
aaaaggtccgtggaaagagggaggacagtacagtcactcgctcagtttatctcactcttt
ctcaaactggatccaagtgaacaactgttcatttatgtcagtcagtcattttctccatca
ccacatcaagaagtgggtgtgtttttcgagtgttttggaagtgatggtaaactatgtgtt
ctccgttactgcaagtcccaggcctggggatga

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