Carassius auratus (goldfish): 113059515
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Entry
113059515 CDS
T07313
Name
(RefSeq) SWI/SNF complex subunit SMARCC1-like isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
caua
Carassius auratus (goldfish)
Pathway
caua03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
113059515
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
caua03021
]
113059515
03036 Chromosome and associated proteins [BR:
caua03036
]
113059515
Transcription machinery [BR:
caua03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
113059515
Chromosome and associated proteins [BR:
caua03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
113059515
PBAF complex
113059515
GBAF(ncBAF) complex
113059515
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_3
SWIRM
SWIRM-assoc_1
Myb_DNA-binding
Myb_DNA-bind_6
Chromo
HEAT_GCN1
BRCT
BRCT_2
Motif
Other DBs
NCBI-GeneID:
113059515
NCBI-ProteinID:
XP_026083823
Ensembl:
ENSCARG00000008461
UniProt:
A0A6P6LGT8
LinkDB
All DBs
Position
41:complement(2263611..2280832)
Genome browser
AA seq
1096 aa
AA seq
DB search
MATAATAAGGTGSGGPSAGQAGAGSSIGRKKDGGPSSKFWESSETVSQLETVRLWIGKHY
KKYVQTDSPTSKTLAALVVQLLQFQEDAFGRRVSNPALTKLPAKSFLDFKPGGALCHILG
SAYKFKSEQGWRRFDLQNPSRMDRNVEMFMNIEKTLVQNNSLTRPIVYLVSDMEQKQANK
LKDIIKRHQGTMTEDKSKATHIIYPSTAQAEEEEWLRPVMRKDKQVLVHWGNYPDSYDTW
ISTSDVDGDVEDPPSSEKPWRVHAKWVIDTDAFNEWMNEEDYEVDENKKPVSFRQRIFPG
EEVSSRTPDRKDRKSLVAGKKRRRSPSPPSTPAESRKKGKKGNPGSQGRRRGHQNDDEQD
EDLTKDLEDPSSVPGMEEVTLPKNVNQKKDSENTPVKGGTIADLDDQEDDSLASGGKEED
EQGKTEVNRLIDSEDNVTEQTHHIIIPSYAAWFDYNSIHEIERRALPEFFNGKNKSKTPE
IYLAYRNFMIDTYRLNPQEYLTSTSCRRNLTGDVCAVMRVHAFLEQWGLVNYQVDSESRP
LPMGPPPTPHFNVLADTPSGLVPLHHRPPQVPPAQQMLNFPEKGKDKPTDLQNFGLRTDI
YSKKNPKGKGAAGGREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPI
EDQYLESSEASLGPLAYQPVPFSQSGNPVMSTVAFLASVVDPRVAAAAAKAALEEFSRVR
EEVPTELVEAHVKKVQEAARSTGKVDPAFGLENSGIAGTAPEEPEKTEPTETEKMDTDSD
SQPDKAESKDEAEKPSESAEKPTETEKEKNETTEKSEPQDDEESEGGESKTAEKDKEEDM
ETTEEGKEGEEEKEEGKKKLELDIGEGNISTAAAAALASAATKAKHLAAVEERKIKSLVA
LLVETQMKKLELKLRHFEELETIMDREKEALELQRQQLLTERQAFHMEQLKYAEMKARQQ
MEQQAAAQQNAGGHHGPPPHGPPPGMHPGHPGHPGHPGPGYPPMHHAMGPHHAPQTGPMV
GPGQPMPSQPMPGRIMPGPPLVGPPQGGMPPMMGPRHPGQPNGMYQVPPPTAQPDGMPPG
PVGPPVSAPPPRAAEN
NT seq
3291 nt
NT seq
+upstream
nt +downstream
nt
atggcgacagcggcgactgcagcgggcggaacgggctccggaggaccatcggccggacag
gcgggcgccggttcctcgatcggacgtaaaaaagacggagggccttcttccaaattttgg
gagagctcggaaacggtgtcgcagttggagacagttcggctgtggattgggaaacattat
aagaagtatgtccaaaccgactctcctacaagcaaaacgttggctgcgctggtggtgcag
ttgctgcagtttcaggaggatgcatttggacgtagagttagcaatcctgctcttaccaaa
ctacctgcaaagagctttctggatttcaaacctggaggagccctttgccacattctgggt
tctgcatacaagttcaaaagtgagcaaggctggaggaggtttgatctgcagaatccatcc
agaatggatcgaaacgtggagatgttcatgaatattgagaagactcttgttcagaacaac
tctttgacccgaccaattgtgtacctggtgtctgacatggagcaaaagcaagccaataag
ctcaaagacatcattaagcgacatcagggaaccatgactgaagataagtcaaaggccact
catattatttacccctccacagcccaggcggaagaagaggaatggctacgtcccgtcatg
cgcaaagacaagcaagttttggttcactggggcaattatcctgacagttatgacacatgg
atatcaacaagtgatgtggatggggatgttgaggatccgccaagttctgagaaaccatgg
agggtgcatgcaaaatgggtcatcgacacggatgctttcaacgagtggatgaatgaggaa
gattacgaagtggatgagaacaagaagcctgtgagtttccgccagcgcatcttcccaggg
gaggaagtgtcttcccgtacacccgatcgtaaggaccgcaagtccctggttgccggcaag
aagaggagacgctctccatccccacccagcacccctgcagagtcccgcaaaaagggcaag
aaagggaatcctgggtcgcagggcaggcgccgtggacatcagaatgatgacgagcaggat
gaagacctcacaaaggacctggaagatccctcgtctgtgccaggaatggaggaagttacg
ttgccaaaaaatgtcaatcagaaaaaggacagtgagaacacaccagtgaaaggcggaacg
attgctgatttggatgaccaggaagatgattcactagcatctggaggcaaggaggaggat
gaacagggcaagacagaggtcaatcgtctgatcgactctgaggacaacgtgactgaacaa
acccatcacatcatcatacccagctatgctgcctggtttgactacaacagtatacatgaa
attgagaggcgtgctctgccagagttcttcaatggcaaaaacaaatctaagactccagag
atctatctggcttatcgcaacttcatgatcgacacataccggctgaatcctcaagagtac
ctgacctccacctcctgcaggaggaacctcactggagatgtgtgtgcagtcatgagagtg
catgcctttttggagcagtgggggctggtgaactaccaggttgactctgagagtagaccc
ctccccatgggccctccaccaacgccacatttcaacgttctggctgatactccctctggg
ttggtgccgttgcaccaccgtcctccacaggttccgcctgctcagcagatgctgaacttc
ccagaaaagggcaaagacaagccaactgacctgcagaactttggtctccgtacagatatt
tactcaaagaagaatcccaagggtaaaggggctgctggtggcagagagtggaccgagcag
gaaacgttgcttctgttggaggctctggagatgtataaggatgactggaataaggtgtca
gagcatgtgggcagccgtacacaagatgagtgcatcttgcacttcctgcggctgcccata
gaggatcaatacctggagagctctgaagcctcgctaggccctctggcttaccagccggtc
cccttcagccaatcagggaatcctgtcatgagcactgttgcgttccttgcctctgtggtc
gacccgcgtgtggcggcagctgctgccaaagcagctttggaggagttctcgcgtgtgcgt
gaggaggttcctacggagctggtggaggctcatgtgaagaaggtgcaggaggctgcacgc
agcacaggaaaagtagaccctgcgttcggcctagagaacagtggcatagctggcacagct
cctgaggaaccagagaaaacagaacctacagagactgagaagatggacactgactcggac
tcccagcctgataaggcggagtcaaaggatgaagcagagaagcccagcgagtctgcagaa
aagccaacagagacagagaaagaaaagaatgagactacagagaaatctgagccacaggat
gacgaagagagtgagggaggagaatccaagacagcagagaaagacaaagaggaggacatg
gaaaccacagaggaagggaaggagggtgaggaagagaaggaagaagggaagaaaaagctt
gagttggatatcggagagggtaacatctccactgccgccgctgctgctctggcttctgct
gccacgaaggcaaagcacctggctgcagtggaagagaggaagatcaaatctcttgtggct
ctgctggtagagactcagatgaagaagctggagctcaaactcagacactttgaggagctg
gagaccatcatggaccgtgagaaggaagctctggagctccagaggcagcagcttttgaca
gagcgacaggcattccacatggagcagctgaagtatgctgagatgaaggctcgtcagcag
atggagcagcaggcagctgcgcagcagaatgcaggaggacatcacggaccacctccacat
ggaccccctccaggcatgcaccctggacacccaggacatcccgggcaccctggccctgga
tatccccccatgcaccatgccatgggtccccaccatgcccctcagacaggaccaatggtt
ggaccaggccagcccatgccaagtcagcctatgccaggacgaataatgcctggacctccc
ctagttggacccccacagggtggcatgccgcccatgatgggtcctcgacaccctggacaa
cccaacggcatgtaccaagttccacctccaaccgcacagcctgatgggatgccccctggc
ccagtgggacctccagtatctgcgccccctcctcgtgctgctgaaaactaa
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