Carassius auratus (goldfish): 113059785
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Entry
113059785 CDS
T07313
Name
(RefSeq) pollen-specific leucine-rich repeat extensin-like protein 1 isoform X1
KO
K03145
transcription elongation factor S-II
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
caua03021
]
113059785
Transcription machinery [BR:
caua03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
113059785
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIS_M
Zn_ribbon_TFIIS
Med26
HVO_0758
Motif
Other DBs
NCBI-GeneID:
113059785
NCBI-ProteinID:
XP_026084162
Ensembl:
ENSCARG00000011676
UniProt:
A0A6P6LKQ5
LinkDB
All DBs
Position
41:2897330..2906923
Genome browser
AA seq
702 aa
AA seq
DB search
MTREEDLLRIAKKLDKMVSRNNMDGALDLLRELKDFNMTLKLLQDTRIGMSVNGIRKHCT
DEDVGNLAKMLIKNWKKLLESAQNQKSERLNEVKNGKHPSKTSGSPSRTSPERESSPRRS
TVETKPDINSNKKLDEKHRRQKPDAEFRIEKRESAQKKEKQTIDNKKERERKDEMNSDQL
PSPMTHSSPPPKCSPAGEVKRERKDAPVDFFPPVSVNSHPPLRRPSIDAKKERKDTQGSL
KSPPLQAHPHKRLFIDGKKERRDAPYPLFPLHHHPHPPLPPPPIPIPKFTSDLKKERKVP
SETLPPPPPPPLLSPPPPKRLLKEEPKERAKKAPDPNAPLPPIPFHLHPPQKREMKKDRK
ETAEPGAPLHLPPAPLHLQPPTPTKRPSLDTKKDKEKERKDTSDPKRQASEHNEKDRKDT
RDSKPLKRASMKIKIERKDSTESKKLDSRKLSLDGRRDSKDSTDSKSSHHILKRQSSELK
LERRDSTSSRSGSSPQGKKSSESKSKPETPRTPTTPTSPLSPSLSSGLGPLSPHLQTGES
IRDKCIEMLAAALRTDDDYKDYGTNCEAMAAEIEDHIYQEIKALDMKYKNRVRSRISNLK
DPKNPNLRKNVLAGAIELRRIATMTAEEMASDELKQLRNVLTQEAIREHQMAKTGGTTTD
LLQCGKCRKKNCTYNQVQTRSADEPMTTFVLCNECGNRWKFC
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgacgcgagaggaggacctgttgcggattgctaaaaaactagacaagatggtgtctaga
aataacatggacggagctctagatcttctgagagaattgaaagatttcaacatgacactg
aagctgcttcaggatacaagaattggcatgtctgtcaacggaataagaaagcattgcaca
gacgaggatgttgggaacttggcaaagatgctaatcaaaaactggaagaagcttttggaa
tcagctcaaaaccagaagtctgagaggttgaatgaagtgaagaatggcaaacatccaagc
aagacatcagggtcacccagcaggacctcacctgagagagagtccagtccacgaagatca
acagtggaaacaaaaccagacataaactctaacaagaaacttgatgaaaaacacagaaga
caaaaacctgatgcagagttcaggattgagaaaagagaaagtgcgcagaaaaaagagaaa
caaactattgacaataaaaaggagcgagagaggaaagatgaaatgaacagtgatcaactt
ccttccccaatgacgcattcatctccaccccccaagtgttcaccggctggggaagtgaag
agggagaggaaagatgctcctgttgattttttccctcctgtttcagtgaattcccaccct
cctctaagacgcccatcgatagatgcaaagaaagagagaaaagacactcagggttcttta
aagtctcctcctcttcaggctcatcctcataaacgtctcttcatagatggaaagaaagaa
aggagagatgcaccttatcctctttttcctcttcatcatcaccctcatcctccacttcct
cctcctcctattcctatccctaagtttacatcagacttgaagaaagaaaggaaagttcct
tctgaaactttaccacctcctcctcctcctcctcttctttctcctcctcctcccaaacgt
ctattaaaagaagagcccaaagaaagggcaaaaaaagcacctgatccgaacgcccctctt
cctcctataccttttcatctacatcctcctcagaaacgtgaaatgaagaaagacagaaaa
gaaacagctgaacccggtgctcctctccatctccctcctgctcctctccatctccagcct
cctacacctacaaaacgtccctcattagacacaaagaaagacaaagagaaagaaaggaaa
gacacatcagacccaaagcgacaggcctctgaacacaatgagaaagatagaaaagacaca
agagacagtaaacccctcaaaagggcatcaatgaagatcaagattgagagaaaagactcc
acagagtccaaaaagctcgattctagaaagctcagcctggatggacggagagacagtaag
gactctactgattccaagtcaagccatcacattttgaaacgacaatcgagtgaacttaaa
ttggagaggagagactctactagctcaaggtctggcagctcacctcagggcaagaaatct
agtgaaagcaagagtaagccagaaaccccaaggacgcccacaacacccacaagccccctt
tccccgtcgttgagctctggtctgggtcctttatctcctcacctgcaaactggagaatcc
atcagggacaaatgcattgaaatgctggctgctgctctacgtacagacgatgactacaaa
gactatgggacaaactgtgaggccatggctgcagaaattgaggatcatatctaccaggag
ataaaagccttagacatgaaatacaagaacagagttcgcagccgcataagtaatctcaaa
gatcccaaaaatcccaatctgcgtaaaaatgtcttagctggggccatcgagttgagacgc
attgccaccatgactgctgaggagatggctagtgatgagctgaaacagttgaggaacgtg
ttgacccaagaggccatccgagaacatcaaatggcaaagactggaggaaccaccactgac
ctgctgcagtgtggcaagtgcaggaagaaaaactgcacctacaaccaggtgcaaacccgc
agtgccgatgaaccaatgaccacctttgtgttgtgcaatgaatgtggtaatcgctggaag
ttctgctaa
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