Carassius auratus (goldfish): 113059824
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Entry
113059824 CDS
T07313
Name
(RefSeq) endoribonuclease ZC3H12A-like
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
caua03019
]
113059824
Messenger RNA biogenesis [BR:
caua03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
113059824
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
zf-CCCH_2
RuvA_C
zf-CCCH
UBA_N4BP1_C
zf-CCCH_4
Motif
Other DBs
NCBI-GeneID:
113059824
NCBI-ProteinID:
XP_026084230
Ensembl:
ENSCARG00000018401
UniProt:
A0A6P6LI12
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All DBs
Position
41:complement(3806572..3817289)
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AA seq
580 aa
AA seq
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MQSGCYHQPAVLGQDGPDLHDLQMKVNFFRKLGYSPQEVKAALRKLGLGTDTNAVLGELV
RSGAKAVPSSTSDSDDGGPHREGSSSRGQDSTLEDSTEPESDLKPIVIDGSNVAMSHGNK
EVFSCRGIKLAVNYFLDRGHRHITVFVPSWRKEQPRPDVPISDQHILEELERKKILVFTP
SRRVGGKRVVCYDDRFIVKLAHDLDGIIVSNDTYRDLQSERPDWKRCIEERLLMYSFVND
KFMPPDDPLGRHGPNLDNFLRKKVIMVEPKRQLCPYGKKCTYGIKCKFYHPERTNQSQRS
LADELRENARLSGSKEDSRVTGPLRGVYPRNDPGFGSCSPSLEQELEEKLNLDPKSCDGR
DVMLQYWDDILSTKKPLYTATMGQHGVSAERTSLLTPYQTNPSSIFSSDSGLGSYQSQFS
DPSQSIELHRMRSNHSPMSGNPGVPAGGQCYYDNMSPYYNHQPNFGACSSLPLPNPVHRY
SHTTYSDRSYPYFLPQATSLPEPFPCPSSPMSHGVYGSHKHSGMPKSNAFQEEREEVRKK
LHAIFNPHHVNKVLEMFPQLKDAQQLAAEVLKLKSKGEFF
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcggggtgttaccatcaacctgctgtcctgggccaagatggacctgacctccat
gacctgcagatgaaggtcaacttcttccgtaagctgggttactctccacaagaggtgaag
gccgccctgaggaagctcggcctggggacagacaccaacgcggtgctcggggagctggtg
cgttcaggggcgaaggccgtgccctcttctacctcagacagtgatgatggtgggccccat
cgggaaggaagctcatctaggggacaggactcaacgctggaggacagcactgaacccgaa
agtgacctgaaacctattgttattgatggcagcaacgtggccatgagtcatgggaacaag
gaagtgttttcttgtcgtgggattaagttggcagttaattacttccttgaccgaggacac
aggcatatcactgtgtttgtgccttcctggagaaaagagcagcccaggcctgatgtacct
atttcagatcagcatattttggaagagctggaaaggaaaaagattcttgtatttacacct
tcacgaagggtcggaggaaagcgtgtggtctgctacgacgatcgctttattgtcaaatta
gctcacgatctggatgggattatagtgtcgaacgacacatatcgtgatctgcaaagtgaa
cgtccagattggaaacgttgcattgaggagagattgcttatgtactcctttgttaatgac
aagttcatgccacctgatgaccctctcggccgtcatggacccaatttagataattttctt
cggaaaaaggtgatcatggttgaacccaagcgacagttatgtccatatgggaaaaaatgc
acatatgggatcaagtgcaaattctaccacccagagcgaacaaaccagtcacagcgttct
ctagccgatgagcttcgagagaatgccaggctatctggttcaaaagaggacagcagagta
actgggccactaagaggcgtgtacccaagaaatgaccctggttttgggtcctgctcaccc
tccttggagcaagaactggaagaaaagctcaacttggatcccaagagctgtgatggtagg
gatgttatgctccagtactgggatgacattttgtccacaaaaaagcctttgtatacagcc
acaatgggacaacatggtgtttcggcagaaagaaccagtctgctaacaccttaccaaaca
aacccttcctctattttcagttctgactcagggcttggatcctaccaaagccagttttca
gatccatcacagagtattgagttgcataggatgagatccaatcattcaccgatgtcaggt
aaccctggtgtacctgcaggtggtcagtgctactatgacaacatgagtccttactacaac
catcagcccaactttggtgcctgcagctccctacctctgcctaaccctgtccatcgttac
agtcatactacttacagtgataggtcttacccttatttcttaccacaggcaactagttta
cccgaacctttcccctgtcctagctcgcccatgtctcatggtgtctatggaagccataag
cactctggcatgccaaagtccaatgctttccaggaagaaagagaggaggtcaggaagaag
cttcatgcaatttttaatccgcatcatgtaaacaaagttttggaaatgttcccgcagctg
aaagatgcgcagcagttggcggcagaggttctcaaactcaagtccaagggagagttcttc
tga
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