Carassius auratus (goldfish): 113059910
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Entry
113059910 CDS
T07313
Name
(RefSeq) integrin alpha-10-like isoform X1
KO
K06586
integrin alpha 10
Organism
caua
Carassius auratus (goldfish)
Pathway
caua04510
Focal adhesion
caua04512
ECM-receptor interaction
caua04810
Regulation of actin cytoskeleton
caua04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
113059910
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
113059910
09142 Cell motility
04820 Cytoskeleton in muscle cells
113059910
04810 Regulation of actin cytoskeleton
113059910
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
caua04515
]
113059910
Cell adhesion molecules [BR:
caua04515
]
Integrins
Integrin alpha subunits
113059910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
FG-GAP
Integrin_A_Ig_2
Integrin_A_Ig_1
VWA_2
FG-GAP_3
Integrin_A_Ig_3
ITGAX-like_Ig_3
FG-GAP_2
vWA_SIBA-E
EIF3I
Motif
Other DBs
NCBI-GeneID:
113059910
NCBI-ProteinID:
XP_026084367
Ensembl:
ENSCARG00000043627
UniProt:
A0A6P6LIE9
LinkDB
All DBs
Position
41:5841069..5869978
Genome browser
AA seq
1175 aa
AA seq
DB search
MEIHKYLLLLKITVLLKGLCECFNIDVKRPRIFSGPEDALFGFSVLQHENNGEKSILVGA
PWDGPQNNKKGDIYKCIVGDEINSICSKVNLGENAFQNVSRNLKNSHLGMTLAPAASDGF
LACAPLWSQECGTSLFSTGICASITNDMEPKDIIAPTAQRCTTYMDIVIVLDGSNSIYPW
YEVQNFLSNILSKFHISPEQMQVGVLQYGEISVHEWSLGDYQTTQDVVEAAKNISRQEGR
ETRTAYAIQMACTEAFSPDRGAREGATKVMIVVTDGESHDGEDLPESLAECEKRNITRYA
IAVLGHYSRRRQDPETFISEIKYIASDPDEKYFFNVTDEAALNDIVDALGDRIFSLEGTL
GYNESAFLMEMSQIGFSTHILDDGILFGMVGAYDWEGGVLKESKEGQLKPSREAFEKEFP
LELKNHAAYLGYTVSSVVLGDWRRLYVAGAPRFKHKGKVILFDLTPDGDVIITQAINGEQ
IGSYFGSEVCVMDVDQDGITDILLIAAPMFLGAGNKETGKVYVYCSDGDGFVPNGTLHSQ
KKAQDARFGYAMAVAPDLNHDGFADLLVGAPLEDDHQGALYVYHGDEYYIITQYKQRILG
SSLSAGLQYFGRSLSALLDLDGDELLDLAVGAQGNVVLLKSRSIVQINVSLSFQPHSINV
IQKNCHRAGRDSACLNATVCFLALSHSPGSHRTYFDMQIEAMLDDRKILARALFDYNSQR
QTLMGIIVRVGQTMCYTLPFHVFDTADYIQPISFTLHFKINDTESGPVLDEGWPTTFMKS
IPFFKDCGEDDVCVTDLVLQAHMNISGTRQQPYVIRGPRQRLPVEVQLQNRLENAYNTSL
TLHYSKNLHFSSLSIREDAQFKIECTALSSNSHSCNVSYPVFRFQSKVNFMLEFEFSCTS
LISKVQMKLNASSDSVEREGTLSDNIVQLQSIVQYEPDLFVTSSFHYSDSNLNRYEVHPT
RTLSEGTGPEFHTHFRVQNLGCFSVSNLELVVNFPAVASGDRVFATVVDAFSLNSSGVNC
SIISDLSKLKSSQRDVRPFHPEDMKKTELLNCSSSWCVEVVCHIQQLLKGQTLIRITRRI
HDNFFRQAKFKAVTIVGSYQLSARESSLIKMGHAALLRETVLEVLKGRSIPISLWILIGS
IIGGLLLLALLVFILWKLGFFTRKPRTDEDENEDN
NT seq
3528 nt
NT seq
+upstream
nt +downstream
nt
atggagattcacaagtacctgctgttgttgaagatcactgttcttctcaaaggtctgtgt
gagtgttttaatattgatgtgaagaggccacggatctttagtgggccagaagatgctctg
ttcggcttctctgtgttacagcatgagaacaatggagaaaaatcaattctggttggtgct
ccatgggatggaccacaaaataacaagaagggggatatttacaagtgcattgtgggagat
gagataaattccatttgctcaaaagttaacctaggtgaaaatgcatttcagaatgtgtct
cgaaatcttaaaaactctcatttggggatgacgctggccccagctgcttcagatggcttc
ctggcctgcgctccactttggtcccaggaatgtggaacatctctgttcagcacgggaatc
tgtgcatctatcaccaatgacatggagcccaaggacatcattgcacccactgcacaaaga
tgcaccacatacatggacatagtgattgttttagatggttctaatagtatctatccctgg
tacgaggtgcagaacttccttagcaacattctcagcaagttccacataagtcctgagcaa
atgcaggtaggtgtcctgcagtacggggagatctcggtccatgagtggtctctcggggac
tatcagacaacacaggatgtggttgaagctgccaagaacatcagtcgtcaggagggacgg
gagacccgcactgcgtacgccattcagatggcctgcacggaggcctttagtccagacaga
ggagcgagggaaggggccactaaagtgatgatagtcgtgacagatggagagtcccatgat
ggcgaagaccttcctgagtccctggctgaatgtgagaaacgtaacatcaccagatacgcc
atcgctgtattaggtcactacagccgcagacggcaagatccagagacatttatcagtgaa
attaagtacattgccagtgacccagatgagaaatacttcttcaatgtgacagatgaggct
gctctaaatgacattgtggatgcattgggggatcgcatttttagtctagaggggaccctg
ggatacaatgaaagtgcctttctcatggagatgtctcagattggtttttcgacacacatt
ttggatgatggcatcttgtttggcatggtgggtgcatatgactgggagggaggcgtcctg
aaggagagcaaagaagggcagcttaagccctcaagagaggcctttgagaaagagttccca
ttggagctgaagaatcatgcagcatacctaggttacacagtttcctcagtggttctaggt
gactggaggaggctgtatgttgctggtgctcctagattcaagcacaaaggaaaggtcatc
ctgtttgacctcacccctgatggtgatgtcataatcacacaggccataaatggagaacag
attggctcatattttggcagtgaggtgtgtgtgatggatgtggatcaggacggaataaca
gatatcctgctgatagctgctcccatgttcctgggagcaggaaacaaagaaacaggcaaa
gtctatgtctactgttcggatggggatggttttgtccctaatggtacgctacattctcag
aagaaagcacaggatgcacgctttggttatgccatggctgtagcccctgacttaaaccat
gatggattcgctgacctgcttgtgggagctccactagaggatgaccaccagggagctctt
tacgtctaccatggcgacgaatactacatcataactcagtataaacaacgtatcctagga
tcctctctctctgctgggctgcagtattttggccgtagcctgagcgctctgctggatctg
gatggggatgagttactggatcttgctgtgggagcacagggcaatgtcgttctgctgaag
tcacgcagtatagtgcagatcaacgtcagcctgtctttccagccacactctataaacgtg
atacagaagaactgccacagggctggccgagactcggcatgccttaacgccacggtttgc
tttctggccctgtctcactctcctggctctcaccgcacatattttgatatgcagattgag
gccatgttggatgacagaaaaatcttggctcgtgctctgtttgactacaactcccagcgg
cagaccctaatgggcatcattgttcgtgtggggcagaccatgtgctacacgctaccattt
catgtctttgatacagctgattacatccaaccaatcagcttcactttgcacttcaaaatc
aatgacacagagagtggaccagtactagatgagggctggccaacaacattcatgaagtct
atcccattcttcaaagactgtggggaggacgatgtgtgtgtaactgatctggttttgcag
gcccatatgaacatttctggaacaaggcagcaaccgtatgttatacgtggccctcggcaa
cggcttccagtagaagtgcagctacaaaacagactagaaaatgcctacaacactagcctc
actcttcattactccaaaaatctgcacttcagcagtttgagtataagggaagacgctcag
tttaagattgagtgcacggctcttagctccaacagtcattcctgtaatgtcagttaccca
gtgttccgctttcagtcgaaggtgaacttcatgttggaatttgagttcagttgtacgtct
ctcatcagtaaggtccagatgaagcttaatgcttccagtgacagtgtggagagagaaggc
acactttcagacaacattgttcagttacagagtattgtacagtatgagccggatctcttc
gtcacaagttcatttcactacagtgactccaacttaaaccgctatgaggttcacccgact
aggacgctgtcagaggggacaggacccgagttccacacacatttcagggtgcagaatctg
ggctgcttctctgtcagtaatctggagctggtcgtcaattttcctgccgtggcttcagga
gacagagtttttgcaactgtggtggatgctttctctcttaattcttcaggtgtgaactgc
agtataatcagtgatctttctaaattaaagtccagtcagagagatgtacgtccatttcac
ccagaggacatgaagaaaactgaattattgaattgcagttcctcttggtgtgtggaggtc
gtgtgtcacatccagcagctactgaagggacagaccttgattcgcatcaccagaaggata
cacgacaacttcttcagacaggccaagtttaaagcagtgacaattgtgggctcttaccag
ctgtcagctcgagagtccagtctgattaagatgggacacgctgccctcttgagggagacg
gttttggaagtgctgaaggggcgttcaatcccaatctctctctggattctgattggcagc
atcattggaggattgctgcttcttgcactcttagtatttatcctttggaagttggggttt
ttcacaaggaaaccgaggacggatgaggatgagaatgaagacaactga
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integrated database retrieval system
