KEGG   Carassius auratus (goldfish): 113059940
Entry
113059940         CDS       T07313                                 
Name
(RefSeq) splicing factor U2AF 65 kDa subunit-like isoform X1
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
caua  Carassius auratus (goldfish)
Pathway
caua03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:caua00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    113059940
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:caua03041]
    113059940
Spliceosome [BR:caua03041]
 Complex A
  U2 snRNP components
   U2 related factors
    113059940
 Complex B
    113059940
SSDB
Motif
Pfam: RRM_1 Transformer RRM_occluded RRM_7
Other DBs
NCBI-GeneID: 113059940
NCBI-ProteinID: XP_026084431
Ensembl: ENSCARG00000046169
UniProt: A0A6P6LLS8
LinkDB
Position
41:complement(6358237..6365071)
AA seq 470 aa
MSDFDEFERQLTENKQADRDKENKHHRRSGSRSRSRDQDRKRRSRDRHGDSKDRRHRRSR
SPHREKKKIIKVKKYWDVPPPGFEHITPMQYKAMQAAGQIPATALLPTMTPEGLAVTPTP
VPVVGSQMTRQARRLYVGNIPFGITEESMMDFFNAQMRLGGLCQAPGNPVLAVQINQDKN
FAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPLPGMSENPSVYVPGTSLFCSPN
SCVVSTVVPDSAHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATSLSKGYAFCE
YVDVNISDQHTSQAIAGLNGMQLGDKKLLVQRASVGSKNTTLTGINQTPVTLQVPGLINN
SMTQMGGIPTEVLCLMNMVAPEELLDDEEYEEIVEDVKEECSKYGQVKSIEIPRPVDGVE
VPGTGKIFVEFMSMFDSQKAMQGLTGRKFANRVVVTKYCDPDAYHRRDFW
NT seq 1413 nt   +upstreamnt  +downstreamnt
atgtcagattttgacgagtttgagagacagctgaccgaaaacaagcaagcagacagagac
aaggagaacaagcaccaccggcgcagtggctcaagaagtcggagcagagaccaggacagg
aaaaggaggagccgtgatcggcatggagacagcaaggaccgcagacacagacgcagtcgc
tctccacaccgtgagaagaaaaagattattaaagtgaagaaatattgggatgttcctcct
cctggatttgaacacatcacgcccatgcagtacaaagccatgcaggctgctggtcagatc
ccggccactgctctgctgcccacaatgacccctgagggtctggctgtgactccaacacct
gttcctgtcgtgggcagtcagatgactagacaggcccgaaggctttatgtcggcaacatc
ccatttggcatcacagaggagtctatgatggacttcttcaatgctcagatgcgtttaggt
ggcctgtgtcaggccccaggtaacccagtccttgctgttcagatcaaccaggacaaaaat
ttcgccttcttggagttccgttcggtggatgagacgacacaggccatggcatttgatggc
atcattttccagggacagagtttaaagattcgccgaccacacgattaccagcctctgcca
ggcatgagtgaaaaccccagtgtctatgtcccaggcacgtctctcttttgctcccccaat
tcttgcgtcgtctccacggtggtgcctgattcggcccataaactcttcatcggcggtctg
ccaaattacctcaacgatgaccaggtcaaggaattgctgacgtcatttggccctctgaag
gcctttaatttggtgaaagacagtgcaacaagcctctctaagggctatgccttctgtgaa
tatgttgacgtcaacatcagtgaccagcacacttcacaggccatcgctggactaaacggg
atgcagctgggggacaagaagctcctggtccagagagcaagcgtcggctccaagaacacc
acactgacgggtataaaccaaactccagttacccttcaagtcccaggtctcataaacaac
tcgatgactcagatgggtggcattcccacagaagtattgtgtctgatgaacatggtggct
ccagaggagctgctggatgatgaagagtatgaggagattgtggaagacgtcaaagaagag
tgctccaaatacggccaggtcaagagcatcgagatcccgcgtccggtcgacggcgtggaa
gttcccggcactggaaagatcttcgtggagttcatgtcaatgtttgactcccagaaggca
atgcagggcttaacaggaaggaaattcgccaacagagttgtggtgactaaatactgcgac
cctgatgcctaccaccgccgcgacttctggtag

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