Carassius auratus (goldfish): 113059985
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Entry
113059985 CDS
T07313
Name
(RefSeq) LOW QUALITY PROTEIN: protein capicua homolog
KO
K20225
capicua transcriptional repressor
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
caua03000
]
113059985
Transcription factors [BR:
caua03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
113059985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_Cic_C
DUF4819
HMG_box
HMG_box_2
Zf_WRKY19
Motif
Other DBs
NCBI-GeneID:
113059985
NCBI-ProteinID:
XP_026084513
UniProt:
A0A6P6LIU3
LinkDB
All DBs
Position
41:complement(7060048..7097435)
Genome browser
AA seq
2612 aa
AA seq
DB search
MRPPKKQRRRSPLSTRAKGARKRVGKLEEHSQTTPPCPSHQKNTPSKEDSSQDKHIKSSN
FLNSEGLKEQITERTVETSKSEGNEEIVNKAKTPKNVNTNSLTDNTDSIKIAKNSHSNST
EICNRNTQNFTSTNSKGINQHANSTASNTQNTNAAANSLNKNNSLSASHTSTTPSSRKTA
TFKARVPKKKYMYEHQAFSTFPISSTPVAQLTIHSNHLSSPHNSISQTTTPVVRNDLVIA
DISEMGKIASTETLKGDRIKGDMLKSEVPSEGEKVVQIMEVDGYGEQAPNSVRSSSTDTA
SEHSVDLEVVEPSCVQLNSGNHVRAPRRFNLSNSSTLSVFLTPNHIQTEQVGSATIAEAL
AKGLKNQRVLARRRPRTNLKKDEKLIKEYIFFCGVVRGSSREQLNVELQINGEGTLLSYP
FHTLVSRPHQPIDLILDAPPPGSEPVEIGTRVCVPYGGDKGRELYREGVVAQVDSHLACP
YMVLLQEDLEQEKERCSSEEVQQTSSTKNVWVTHQNLRLLVPPWDGVMREKEQEEREHRE
EIEVERELCQLSEGMDLVSAAPPRENCRFPSPDTGVHHYGSTHLSSSTSPAVVMVANSMF
SLATRKNDDVTGNRERIREREHERKQLKTPEVDMEVLQLNMAPLRDGGGPIVSGGPKASM
PNQHRQILSKPPGYRSPITVVRGISGTSLGSPQPSPSPAVLGSDGGTSHPIPPSVPPSPS
SRGSLTPLEKTPTPSQTSTPIPGSSASSSASSSRSRTPLSAAQQKFKKGDVVCTPNGIRK
KFNGKQWRRLCSRDGCMKESQRRGYCSRHLSMRTKEMEGAVGERGSGGGGESSSGTVTPS
DLRGRASSEFDWDETSRDSSETSSRGTDSRPRLGLPLLLPQDFSRFDFDECEAATMLVSL
GSRSVTPSFSPISNQSPFSPTPSPSASPLFGFHPANFSPVTASPVLPPRRHKNPSGTNSG
VLKHGTGGTEREKDRHLSSVVPSFHTNLTFTVPMSPGKRRTDAPPPPAPLSQEYGKPDQE
QSCRDSSLVTNLCIISTQTTAVTHPQRLTSTTVSSSPTSPLCLESGSQCTVSQQPLRDSP
VIVRNPEVPLIKFTELPLTRVAEVDRTSSTENIQTGLHSETGLHVPVPINAASTNGSVLL
QNATSTLVLVSTTSSFPNPTPAGLPSQSSATLACISVPSPVPRPGLNGAGDGGGQDKSGQ
VTLQQPVPCHPAPTALLPLILPTETLHPVPCKEIIMGRPGTVWTNVEPRSVPVFPWHSLV
PFLAPTQSDLSAQPGEGQQTVSHPQTASLKKEAQSGSVLKEIIEGAPNPSSRPTPSADEL
PPEREKDAERERPDSETESDVDDPFFPGVLPDPPISASPGKRRSQSLSALPKDDKTSPGK
REKDHIRRPMNAFMIFSKRHRALVHQRHPNQDNRTVSKILGEWWYALGPKEKQKYHDLAF
QVKEAHFKAHPDWKWCNKDRKKSSSEGRGVPGGKDIRERSMSETTEPPSVSMGMELKGVG
PGMVSVSERVGAEGQGQLPRPRAFSQSAMHNLERSERGNPQALAELAQMCGDGGQVARRG
ALSQTQRGVSEDMTSDEERMVICEEEGDDDVIDDSYPGSSIDLKCKERVTDSDSENGSGD
EGERKRVFAPVICSSSYGPGHGRSVSLSSYPSSRRFSDASSKRKRAVEGGDGERREGEGA
VSQPSAGQSILLSSAGGVSSVLGAVRVASTVVTNVVRPVVSTPVPIASKSPHDRKPAPPQ
TQLFIGPGTTGNPATASGGGGGYYSSSSPNPVSASGAQGGLVTNLVLGGTFQAPPGVQLL
TPPHPQNPASPASAPLTHSNGPLPLPVLQSHILPSASITPSSGQKPMTQVQYIIPTLSTN
NPKSPSPQQAGQPTSIFTLPTALPTHASLANGKQSGYVSSPAVGVVSPGARVQTQSPVLQ
GKMLVPMATVRAAPAPPHHFPLVAPPLPVQNGGQAGSKIIQIAPMPVVQSQLPSTGPVQP
GSPFSVTMGTATVVAPGSTPSQTVLLPPPPTRITYVQSAPGVPSPLPLVPTTTGSSSQKA
SATPGSAYVPSPLATFAAIAHPGQTLVQPLIAGQPSLLAPAQSPSAPHAPAISAIYTSTN
VTLATGVVSMGTVSPSVVYTVSSSSSPSPHILPKYTTMTSMTSVTSDRQGNISTHSERQL
HQERTLDRQHTDSHVYTQSSERQAEKVSLFQPDKQFQFPSKSSSSSVAPPPGTSPGSPAQ
TSHSGSAPGTPKLITPRPPQKVKATVANIPVGSYDGGGRGKEREKERDREKEREREKDKE
SASRFSFEVDKAAETSSPATFSPEEGSAEAESATGRGKDANAKEAEWKDSHPSSPLPASS
GSDPAPPQSHGDKDAPPKKVKARPPPLKRPFDSVDKVLSEVYFEERFAKLPEFRPEEVLP
SPTLQSLATSPRAILGSYRRKRKNSTGENLDSSTEDPISPKRKSRRRSSCSSEPNTPKSA
AKCEGDIFTFERPDGEDVLGELEFDKVPYSSLRRTLDQRRALVMQLFQEHGFFPSAQATA
AFQARYADIFPTKVCLQLKIREVRQKIMQTAAPSELAGTSDISCLPGPSGAAVAASDIAA
GAEPQEKEAEREGEQNSSEEPRNADDSQDSTR
NT seq
7839 nt
NT seq
+upstream
nt +downstream
nt
atgaggccaccaaagaaacagagaagacgctctcctttatcgacaagagcaaaaggagca
agaaaacgagtgggcaagcttgaagaacattcacagacaacaccgccttgtccttcacac
cagaaaaacactccatccaaagaggatagctctcaggacaagcatatcaagagtagcaac
ttcctaaacagtgaagggttaaaagagcaaataacagaaaggacagtggaaacatcaaaa
tctgaagggaatgaagaaatagtgaataaggcaaaaactcccaagaacgttaatacgaac
agtttaacagataatacagactcaatcaagattgccaaaaattcacatagtaatagcaca
gaaatctgtaacagaaacacacaaaactttactagcacaaacagtaaaggtatcaaccaa
catgcaaacagcactgctagcaatacacaaaacacaaatgctgcagcaaacagtttaaat
aaaaataactctttgagtgccagccacacttccaccacaccttccagtcgaaaaacagcc
actttcaaagctagggtgcccaagaagaaatacatgtatgaacatcaagctttcagtact
tttcccatcagttcaacccctgtagctcaactcactattcatagcaaccatctaagttct
ccacacaactccatttctcagaccactactcctgtggtcagaaatgatttagttatagca
gatatttctgaaatggggaaaatagcaagcacagaaactcttaaaggagacagaattaag
ggtgatatgttgaaaagtgaggtgccttctgaaggagaaaaggtggtccaaattatggaa
gtagatggatatggggagcaagctccgaattctgtgcgctcatcatccacagacacagcc
agtgaacactctgtggatctggaggtagttgagccctcttgtgtgcagctaaattcaggg
aaccatgtaagagcgccaagaagattcaacctctccaacagttcaaccctgtctgtcttc
ttgacccccaatcacatacaaactgagcaggtagggtctgcaacaatagcagaagcacta
gctaaaggactaaaaaaccaaagggtgctagcacgtagacggccaagaactaatttaaag
aaagatgagaagttgatcaaggaatatatttttttctgtggtgtggtgcgtgggtccagt
agagagcagctgaacgtagagttgcagattaatggggaggggacactgctctcatatcct
tttcatacattagtaagtcgcccacaccaacccattgacctcattttagacgccccaccc
ccaggaagtgaacctgtggagattgggacgcgtgtttgtgtgccttatggaggagataaa
ggtagagagttgtacagagaaggtgtggttgctcaggtagactctcatttagcttgcccc
tacatggtgcttttgcaagaggatttggagcaggagaaagaaaggtgcagcagtgaggag
gtgcaacagacatcaagtacaaagaatgtatgggttacccaccagaacttgcgcctcctt
gttccaccatgggatggggttatgagagagaaagaacaggaggaaagagagcacagggag
gagatagaagtggagagagagctttgtcagttaagtgagggaatggatttggtaagtgca
gcccctcccagggagaactgcagattcccttctccagacacaggggttcatcattatgga
agcacacatctttcatcttccacttcaccagcagttgttatggtagcaaacagtatgttt
agtttagcaactaggaagaacgatgatgtaactgggaatagggaaagaattagagaaaga
gaacacgagcgaaagcaactgaagactccagaggtggacatggaggttttgcagctgaac
atggcacctctcagagatggtggagggcccatagtctcagggggaccaaaagcaagtatg
cctaatcagcacagacaaattctttccaaaccacctgggtatcgaagtcccattacagtg
gtgcgaggcatctctgggacttctttaggaagtccacagcccagcccttcacctgcagtt
ttagggtctgatggggggacctctcaccccataccaccctctgtacctccttcccccagt
tccaggggttctttgacacctctagaaaagactcctacaccttcacagacctccacccca
attccagggagttctgcttcttcttctgcttcctcctcaagatcaaggacaccattgtca
gctgcccaacagaaattcaagaaaggcgatgtggtttgtacccctaatggaatccgtaag
aagttcaatgggaagcagtggcgccggttgtgctctagagatggctgcatgaaagagtcc
cagcgtcgtggctactgttctcgtcacctctccatgcgcaccaaagaaatggagggagca
gtgggagagagggggagtggaggaggtggagagagtagctcaggtactgtgaccccttca
gatctgcggggtcgtgctagcagtgaatttgattgggatgagacttctcgtgacagtagt
gagacaagcagccgaggtactgactctcgtccacgtcttggcttgccattactgcttcct
caagatttctctcgttttgactttgatgaatgtgaagctgcaactatgctggtatccctg
ggctcaaggtctgtaacaccctcgttctcaccgatttcaaatcagtccccattctcacct
acaccatccccatcagcttcaccactttttggctttcaccctgcaaatttcagtcctgtt
actgcttccccagttttgcctcctcgtcgccacaaaaaccctagtggtaccaacagtggt
gtcctaaaacatggaacaggaggcacagagagagagaaagacagacacttgtctagtgtt
gtgccatccttccacactaatctaaccttcacggtacctatgagtccaggcaaacgcagg
actgatgcgccacctcctccagctcctctgtcgcaggaatatggcaaacctgatcaggaa
caaagctgtcgggactcttctcttgtaacaaatctctgtattatctctactcagaccact
gctgtcacacacccccaaagactgacttcaactactgtctcttcctcacccacttctccc
ctatgcttagaatcaggttcacaatgtacagtttcccagcagcctttgagagactctcca
gtaatagtgagaaatcctgaggttcctttaataaagtttacagaactgccactgactaga
gttgcagaggtggacaggaccagttccacagaaaacatccaaactggtctacattcagaa
acaggactacatgttcctgttccaattaacgctgcttccactaatggatctgtcttactg
cagaatgccacctcaactcttgttctagtgtctactacctcttcctttccaaacccaacc
cctgcaggtctaccttcacaatccagcgccaccttagcctgcatatcagtgcctagccct
gtcccaaggcctggtctcaatggtgcgggtgatggagggggccaagataagagtggtcaa
gtgacattgcagcagccggttccttgtcaccctgctcctactgccctgctgcctctcata
cttcccactgagaccttgcatcctgtgccatgcaaagaaatcatcatggggcgacctgga
actgtgtggactaatgttgagcccagatctgttccagtgtttccttggcattcattggtc
cctttcctggcacccacccaatcagatctgtcggctcaacctggtgagggccaacaaact
gtcagtcatccgcagacagcttctctgaagaaagaggctcagagcgggtcagtgctgaag
gagattatagagggagcacctaacccttcctcacggcccactccctccgctgatgaactg
cccccagagagagagaaggatgcggagcgagagagacctgacagtgaaacagagagtgac
gtggatgatccatttttccccggtgttcttcctgatccgccaatttctgcgtctcctgga
aagcgtagatctcagtccctcagtgcactgcccaaagatgacaaaaccagtcctggaaag
agggagaaagatcacatccggaggcccatgaatgcgtttatgatcttcagcaagcgtcat
cgtgcgctggttcatcagagacacccaaaccaggacaaccgcactgtcagcaagatactt
ggagagtggtggtatgctttgggacccaaagagaaacagaaataccacgatctcgcattt
caggtgaaggaggcacactttaaggcacatcccgactggaaatggtgtaataaggacaga
aagaaatccagcagcgagggacgaggtgttccagggggcaaagacatccgcgagaggagc
atgtcagaaaccacagaacctccatctgtgtcaatgggaatggagctcaaaggggtgggg
cctgggatggtgagcgtgtcagagcgagtcggagctgagggacagggtcaattgccccgc
cctcgtgccttctcccagagtgccatgcacaatctggagaggagcgagagaggcaatcca
caggcactcgctgagctcgcacagatgtgtggtgatggtggtcaggttgcaaggcggggt
gctctctcccagacacagaggggggtaagtgaggacatgacaagcgacgaagagcgtatg
gtcatctgtgaagaagagggggatgatgatgtcattgacgactcgtatccaggcagctcc
attgacctgaagtgtaaggaaagggtgacagacagtgatagtgaaaatggatctggagat
gaaggagaacgcaagagagtttttgctcccgtgatttgctcctcgtcttacggccctggt
catggtcggagcgtatctctctcctcctaccccagctccagacgctttagcgatgcttcc
tcaaagagaaagcgagcagtggagggaggtgatggagaaagaagggaaggtgaaggagca
gtgtcccagccctctgcgggtcagtccatcctgctcagttctgccgggggagtgtcatca
gtgctaggagcggtgagagtggcgtccactgttgtcactaatgtggtgcgacctgtggtc
agcacgccggtgccgatcgccagcaagtccccacatgaccggaaacccgctccgccacag
acacagcttttcattggacctggtaccacaggaaacccagcaacagcttcaggtggaggg
ggtgggtactattcctcatcatcgcccaatcctgttagtgcatcaggagctcaagggggg
ctggtgaccaatctagttttgggaggcacattccaagccccacccggtgtacagcttctc
acaccccctcatccacaaaacccagcctccccagcatcggcccctcttacccatagtaat
ggtccacttcctctgcccgttctgcagtcacacatccttccctctgcatcaataacccct
tcatcgggccaaaaacccatgacacaggttcagtacattatccctaccctctctaccaac
aatcccaagagcccctcccctcagcaggccggtcagccaaccagtatcttcaccctacct
acagctctgcccactcacgcctcgttggccaatgggaagcagtcgggatacgtctccagt
cctgctgtgggtgtagttagcccaggagccagagtgcaaacacagtcaccagtcttgcag
ggcaagatgctggttcccatggcaacagtgagggctgctcctgccccccctcatcatttt
cccttggtagcccctcctcttcctgttcagaacggaggacaagcaggaagcaagattatt
cagattgcgccaatgcctgtcgtccagtcgcagcttccctctacaggaccagtgcagcct
gggagtccgttttctgttactatgggaacagctacagtggtggccccaggctctaccccg
tctcagaccgtgctgctaccgcccccacctacaagaatcacttatgtacagtccgctcct
ggggttccttctcctttgccgttagttcccacaacaaccggctcctcctctcagaaagct
tcagcaacacctggatctgcttatgtcccgtctcccttggccacctttgcagccatcgct
catccggggcagactttggtgcagccactgatcgcaggtcagccatcactgttggccccg
gcccagtctcccagcgcccctcacgctcctgccatctccgccatctacacctctacaaat
gtgaccctggctactggggtggtgtctatgggtacggtgtcacccagtgtggtgtacacg
gtgtccagttcctctagcccatctccacacatccttcctaaatacaccacaatgacctcc
atgacctctgtaacctcagacaggcaagggaacatatccacacattctgagcgacagttg
caccaggagcgaactctggaccggcagcacacagacagtcatgtctacacgcagtcctct
gagagacaggccgagaaggtctctctcttccagccggacaaacagttccagttcccgagt
aaaagcagcagcagttcggttgcacctccaccgggcacctcacctggaagccctgctcaa
acctctcattctggcagtgctccggggacacccaagctgatcacgccaaggcctcctcag
aaagtgaaagccactgtggccaacatcccagtgggcagttatgatggaggagggagaggc
aaagagcgagaaaaggagagggacagggagaaagagagagagcgagagaaggacaaagag
agtgctagtcggttctcatttgaggtagacaaggcagccgagacgagctcccctgcaacc
ttttcaccagaggaggggtccgcagaagcagagagtgctactggccgtggcaaagacgca
aatgctaaggaggctgaatggaaggactcccacccttcttctccattacctgcttcctct
ggatcagatcctgctccgcctcagtctcatggtgataaagatgcaccacctaaaaaagtc
aaagcccggcccccaccactcaaacgaccgtttgattctgttgacaaggtcctgtcagaa
gtgtactttgaggagcgcttcgcaaagctgccagaattccgtccagaggaggttctgcct
tctccaaccctgcagagtctggccacctccccacgagccatactgggcagctaccgcagg
aagaggaaaaactccaccggtgagaacctggactcatccacagaagatccaatctctccg
aaaaggaaaagccgccgcagatctagctgcagttcagagccaaacacacctaaaagcgct
gcaaagtgtgaaggggacattttcacctttgaaaggccagatggagaggacgtgctgggg
gagctggagtttgataaggtgccctactcctctctcaggagaactcttgatcagaggaga
gctcttgtcatgcagctattccaggagcatggcttcttcccttcagctcaagctactgct
gcgttccaggcgcgatacgctgatatcttccccactaaggtttgtttacagctcaagatc
cgagaggtccggcaaaagatcatgcaaacagcagctccgtcggaattggccggcacttca
gatatatcctgcttgcctggaccttctggggcagcggtggcggccagtgacatagctgca
ggggcagagcctcaggaaaaagaggccgagcgtgagggtgagcagaacagctcggaggag
cccagaaatgctgacgattcacaggactccaccagatga
DBGET
integrated database retrieval system
