Carassius auratus (goldfish): 113060082
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Entry
113060082 CDS
T07313
Name
(RefSeq) iroquois-class homeodomain protein irx-1-like
KO
K24889
iroquois-class homeodomain protein IRX
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
caua03000
]
113060082
Transcription factors [BR:
caua03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
113060082
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Dicty_REP
MRP-S32
Astro_capsid_p
Motif
Other DBs
NCBI-GeneID:
113060082
NCBI-ProteinID:
XP_026084687
Ensembl:
ENSCARG00000011759
UniProt:
A0A6P6LM07
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Position
41:complement(11308484..11312700)
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AA seq
430 aa
AA seq
DB search
MSFPQLGYPQYLSASQAVYGGDRPGVLTPSSRGGSAEIGGSASAAAAAVSSVLGMYPYAH
NYSAFLPYTSADLALFSQMGSQYDLKDSPGVHPASFAAHASPAFYPYGQFQYGDPSRPKN
ATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKVTW
GRSKEDEDANIFGSDNEGDAEKNEDDEEIDLESIDIDKIDENDGDQSNEEDEEKRGELER
LHAHEAFEKSKPNTISGSKEPSDGNNNNTSVLSPGRQGGFPVPVSNKPKIWSLAETATSP
DSLQKPTSPSVPATHPAFLPSHGLYTCQIGKFHNWTNGAFLGQNSLLNVRSFLGVSHQHT
HPVQQQHSSGAAVNSDKAPEDLSPKHIDRENVLRNESPTQPLKSSFRPLHDSPRNQQEST
QRVLTALSSA
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgtctttcccgcagctgggttacccgcagtatttaagtgcctcccaggcggtgtacgga
ggcgatcggccgggagtgctgactccgtcgtcccgcggagggagcgcagagatcggggga
agcgcgtcggcggccgccgctgccgtgtcctcggtgctgggcatgtacccctacgcacac
aactacagcgcctttctgccttacaccagcgccgatctggctcttttctcccagatgggc
tctcagtacgacttaaaagacagtcccggagtgcaccccgcgagcttcgctgcccacgcg
agcccggccttctacccctacggtcagttccagtacggagacccgtccaggcccaagaac
gccacgcgggagagcaccagcaccctgaaggcctggctcaacgagcacaggaagaacccc
taccccaccaaaggagagaagatcatgctggccatcatcaccaagatgaccctcacgcag
gtgtccacctggttcgccaacgccagaagaagactcaagaaggagaacaaggtgacatgg
ggcagaagtaaagaggacgaagacgccaatatttttgggagcgacaacgagggggacgcc
gagaagaacgaagacgacgaggaaatagatctggagagcatagatatcgacaagatcgac
gaaaacgacggagatcagagcaatgaggaggacgaggaaaagcgcggggagctcgagaga
cttcacgctcacgaggccttcgagaaatccaaacccaacaccatttccggcagcaaagag
ccgtcggacggaaacaacaacaacacaagcgttctgtcgccaggtcgccagggaggtttt
ccagttcccgttagcaataaacccaaaatatggtcgttagcagaaaccgcgaccagtccc
gatagcttgcagaaacctacgtcaccctcggttcccgccactcacccggccttcctgccg
agccacggactgtacacgtgccagatcgggaagttccacaactggaccaatggcgcgttt
ctgggccagaactccctgctgaacgtgcgatcgttcctgggcgtcagtcatcagcacact
cacccggttcagcagcagcactcatccggggcagccgtgaacagtgacaaggcgccagag
gacctgagtccaaaacacatagatcgggaaaatgtcctcagaaatgaatcaccaacgcaa
cctttaaagtcatcctttcgtcctcttcacgacagccccagaaaccagcaggaatcgaca
cagagggtcctcacagctctctcttccgcttga
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