Carassius auratus (goldfish): 113060084
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Entry
113060084 CDS
T07313
Name
(RefSeq) iroquois-class homeodomain protein irx-2-like
KO
K24889
iroquois-class homeodomain protein IRX
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
caua03000
]
113060084
Transcription factors [BR:
caua03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
113060084
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
MRP-S32
Motif
Other DBs
NCBI-GeneID:
113060084
NCBI-ProteinID:
XP_026084688
Ensembl:
ENSCARG00000011784
UniProt:
A0A6P6LJC3
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Position
41:11480437..11484954
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AA seq
415 aa
AA seq
DB search
MSYPQGYLYQPPGSLALYSCPLAAPRSEELARSSSGSAFSPYPGSAAFTASANAFSSPLP
YSTDPATGFPSYMGSPYDAHTTGMAGAISYHPYGSPGYPYQLNDPAYRKNATRDATATLK
AWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWAPRTKSEDED
EDDGDGERKDERTDKNTDNSETSAEDEGIGLHLTDRSCSVESDGEKVACRTGDRVCDSGL
DIKDKCDSGDLDTGREDRQRGPSPKPVTSSPLTAVEAPLLTHHHRENSTNKTCLDGQNQT
VKPKLWSLAEIATSDPKQQQNCPPGVGLLTSPASSASPAGAVYPATSILGRPLYYTSPFY
SNYTNYGNFSSAAEGLLHKQTSPNQTEQHFRASSADSKKDPSEVFTARAQSYLSS
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgtcctatcctcagggttacctctaccagcccccgggctccctggcgctctactcctgt
ccgctggccgccccgaggagcgaggagctggcccggtcctcgtccggttcagcgttcagc
ccgtaccccggatctgcggcgttcacagcctcggccaacgctttctccagccctctgccc
tactccacagatccagccacgggattcccgtcctacatgggctctccgtatgacgcgcac
accacgggaatggcaggagccatcagttatcacccgtacgggagtcccggttacccgtac
cagctcaacgaccccgcgtaccggaaaaacgccacgcgggacgcgacggcgacgctaaaa
gcgtggctccaggagcacaggaaaaacccttatcccaccaaaggagagaagatcatgctg
gccatcatcaccaagatgaccctcacgcaggtgtccacctggttcgccaacgccagaaga
agactcaagaaggagaacaagatgacatgggcaccacggactaaaagtgaggatgaggac
gaggacgacggcgacggggagagaaaagacgagcgcacggataaaaacacggacaacagt
gaaacgtctgctgaggacgaaggcatcggtttgcacctgacagatcgctcgtgctcggtg
gaatcggacggggagaaggtcgcgtgcaggaccggggaccgggtttgtgattctggactc
gatatcaaggacaagtgtgactctggtgatctggacacgggccgcgaggacaggcagaga
ggcccttcacccaaaccggtgacctcctcccctctgaccgcggtggaggcccctctcttg
acccatcatcaccgagagaacagcaccaacaaaacatgtctggacggtcaaaaccaaacc
gtcaaacctaagctgtggtcattagccgagatcgccacttcagacccaaagcagcagcag
aactgtcccccgggcgttggccttctgacctccccggcgtccagcgcgtctccggcgggc
gcagtgtaccccgccacctctatattaggaagaccgctttattacacctcgccgttttac
agtaattacacaaactatggcaacttcagctcagctgctgagggactcctgcacaaacag
accagtccgaaccagaccgagcagcacttcagggcctccagcgcagactccaaaaaagac
cccagcgaggtgttcacagcaagagcccagtcatacctgtcgagttaa
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