Carassius auratus (goldfish): 113060085
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Entry
113060085 CDS
T07313
Name
(RefSeq) iroquois-class homeodomain protein irx-4-A-like
KO
K24889
iroquois-class homeodomain protein IRX
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
caua03000
]
113060085
Transcription factors [BR:
caua03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
113060085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
SID-1_RNA_chan
Motif
Other DBs
NCBI-GeneID:
113060085
NCBI-ProteinID:
XP_026084689
Ensembl:
ENSCARG00000011806
UniProt:
A0A6P6LJC0
LinkDB
All DBs
Position
41:11624856..11628666
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AA seq
449 aa
AA seq
DB search
MSYPQFGYPYSSAPQFLMTTNSLTSCCESSTRSISDSSAQTPVYCPVYESRLLATARHEL
SSAAALGVYGSPYTGGQSYGNYVTYGADASAFYSLGAFDAKDGSASAHAGITPAAAYYPY
DPTLGQYQYDRYGSMEGGSRRKNATRETTSTLKAWLQEHRKNPYPTKGEKIMLAIITKMT
LTQVSTWFANARRRLKKENKMTWPPRNKGSDDKKYEDDDEDGSQEDQIKSETNDDESKSR
EDKELQLSDLEDFDTIESESSECELKHRFHMNTHMETTDDRLKEASPKLSIPGLLEAERD
LTKSCLKSTAEDCEHNKTCFQQQGHPLLDSKPRIWSLAQTATEYSSCMLRCQPSPSASSP
VSGLERQQDSPVTTLRNWVDGVFHDPLFRHSSLNQAHTNTTVSWTTSTKGSILETGALGR
SNNMIKTQQQEPSKDSMPFPKGVNKIFCS
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgtcctatcctcagttcggatatccttactcttctgcacctcagttcctcatgaccacc
aactccctgacatcttgctgtgagtcgagcaccagatccatctcggactcgtccgcgcag
acgcccgtttactgtccggtgtacgagagcagactgctggccaccgccagacacgagctg
agctccgccgccgcgctgggagtctacgggagcccttacaccggcggacagagctacggg
aactatgtcacctacggcgctgacgcgtccgctttctactctttgggagcgtttgatgcc
aaagacggaagtgcttctgcgcatgcgggaataacaccagctgccgcatactacccttac
gatcccaccctgggacagtaccagtatgacagatacggatctatggagggaggaagcaga
aggaagaacgccacgcgtgagaccacgagcacgctaaaagcgtggctccaggagcacagg
aagaacccctaccccaccaaaggagagaagatcatgctggccatcatcaccaagatgacc
ctcacgcaggtgtccacctggttcgccaacgccagaagaagactcaagaaggagaacaag
atgacatggccaccgagaaacaagggctcagacgataagaagtacgaggatgatgatgaa
gatgggtcgcaagaagatcaaatcaagagcgaaaccaacgatgacgagagcaaaagtcgt
gaggacaaggagctgcagctgagtgacttggaggacttcgacaccatcgagtctgagagc
tccgagtgtgaactcaagcaccgcttccacatgaacacacacatggagaccaccgacgac
cgcctcaaagaagcgtctccgaagctctccatccccggtctgctcgaagccgagcgcgat
ctcaccaaaagctgcttgaaaagcacagcggaagactgtgagcacaacaaaacgtgcttc
cagcagcagggccatccgttactggacagcaaaccccgcatctggtctctggcccagacc
gcgacagagtactcctcatgtatgcttcgctgtcagccatcgccctccgcctcctcacct
gtcagcggcctggagagacagcaggactcacctgtcacgactctcagaaactgggtagat
ggagttttccacgaccccttgtttagacacagctccttgaaccaagcacacacgaacact
acggtttcttggaccacctcgaccaaagggtcgatcttagagactggagccctgggacgc
tccaacaacatgataaaaacacagcagcaagagcccagcaaggacagcatgccatttcca
aaaggggtgaataaaatattctgttcctag
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