Carassius auratus (goldfish): 113060104
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Entry
113060104 CDS
T07313
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM71
KO
K12035
tripartite motif-containing protein 71 [EC:
2.3.2.27
]
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
caua03019
]
113060104
04121 Ubiquitin system [BR:
caua04121
]
113060104
Enzymes [BR:
caua01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
113060104
Messenger RNA biogenesis [BR:
caua03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
113060104
Ubiquitin system [BR:
caua04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
113060104
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
Filamin
DUF5128
zf-B_box
SGL
ANCHR-like_BBOX
zf-RING_5
zf-C3HC4
zf-RING_2
Invasin_D3
Ig_GEX2_N
Caps_syn_GfcC_C
DUF4094
Motif
Other DBs
NCBI-GeneID:
113060104
NCBI-ProteinID:
XP_026084717
Ensembl:
ENSCARG00000015343
UniProt:
A0A6P6LM38
LinkDB
All DBs
Position
41:12756171..12793092
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AA seq
824 aa
AA seq
DB search
MCEVILWSSAQMASFPDSDLQTCPLCKELCGFSAPISSNSSTSSSSSQTSSSSSTSSTRR
LHVLPCLHAFCRQCLEGHRSPGDPLKLRCPTCDQKVSLSESGVDALPSSNFLFSDLLDVV
VSAEEQGKNGRSSSVVHHGGLLRPQHLSDPQCSSCDEGNPAASHCLDCQEYLCDNCVRAH
QRVRLTKDHFIEGLLESLHLANRTNNSNTPINISQSFHNSFSMLNVFQERMDFCQHHDDE
VLRFFCDSCGVPICRECSLGRHAGHSFTYLQEALQDSRALTIQLLADAQQGRQAVQLSIE
KAQAIAEQVELKAKVVQSEVKSITLRHKKALEERECELLWKVEKIRQVKAKSLYLQVEKL
HQSLTKLDSTIATVTQVLEEGRSIDVLLAREHMLNQLQELKSIRCILQPQEDDRIMFTPP
DQALLIAIKSLGLISSGAFATASKAHGEGLKRALQGKPASFTVVGYDHDGEPRLSGADSV
SVVLMSPDGNLSSADVSDHQDGTYTVSYLPKCEGEHLLSVLICNQHIEGSPFKVMVKSGR
SYGGVGLPIVSFGGEGDGDGQLCRPWGICVDKEGYVVVADRSNNRVQIFKPCGTFHHKFG
TLGSRPGQFDRPAGVACDSQRRIIVADKDNHRIQIFTFDGQFLLKFGEKGTKNGQFNYPW
DVAINSEGKILVSDTRNHRVQLFGPDGTFLNKYGFEGALWKHFDSPRGVAFNREGHLVVT
DFNNHRLLVIRPDCQSARFLGSEGTGNGQFLRPQGVAVDQEDRIIVADSRNHRIQVFEPN
GNFLCKFGTHGNGFGQMDRPSGIAVTPDGMIVAVDFGNNRILMF
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgaagttattttgtggtcctctgcgcaaatggcgtctttcccagactccgacctg
caaacatgtccgctgtgcaaggagctgtgcggcttctctgctccgatctcctccaattca
tctacctcctcctcgtcctcccagacctccagctcctcatctacctcatccaccaggaga
ctgcacgtcctgccctgtctccacgccttctgcaggcaatgcctagagggccacaggagc
ccaggtgatccgctgaagctcagatgccccacatgcgaccaaaaagtgtctctgtcggaa
tccggcgtggacgcattgccttcctccaactttctcttcagtgacctgctggatgtggtg
gtctctgctgaggaacagggcaagaacggccggtcttcatcggtggtccatcacggcggt
cttctgagaccccagcatctgtcagaccctcagtgcagctcttgtgatgagggcaacccc
gctgcttcccactgcctggactgccaggagtatctgtgtgataactgcgtcagggctcac
cagagggtccgactcaccaaagaccacttcatcgaggggcttctggagagcttacacctg
gccaaccgcaccaacaactccaacacccccatcaacatctcccagtccttccacaacagc
ttctccatgctgaatgttttccaggagaggatggacttctgccagcaccatgatgatgag
gtgctgcggtttttctgtgacagctgtggtgtgccaatctgtagagagtgcagcctgggc
agacatgcaggtcacagtttcacttacctgcaggaagccctgcaggactccagagcgctg
accatccagctgctcgcagacgcacagcagggcagacaggctgtacagctgagcatcgag
aaagcccaggccattgctgaacaagtggaactgaaggctaaggttgtgcagtcagaagtg
aaatccatcactcttcgtcacaagaaagctctggaggaacgtgagtgtgagctgctctgg
aaggtggagaagattcgccaggtgaaggcaaaatcactttacctgcaggttgagaaacta
caccagagtctcaccaagctggatagtactatcgccacagtgacacaggttctagaagag
ggtcgtagcatagatgtcctgctagcacgagagcacatgttaaatcagctacaggagctt
aaatccatccgctgcatcctacagccccaagaagacgatcgcattatgtttacaccacca
gaccaggctcttctgattgccatcaagtccctgggcctcatcagcagtggagccttcgcc
acagcttccaaagcgcacggtgaaggcctcaagagagcactgcagggaaagccagcttcc
tttactgtcgtagggtatgatcatgacggtgagcctcggttgtctggtgctgacagtgtg
tcggttgtgcttatgagtccggatggtaatctgtctagcgcagatgtttctgaccaccaa
gatggaacgtacacagtcagctatctgcccaagtgcgagggtgagcatctgctatcggtg
cttatatgcaatcagcacatcgagggaagtcctttcaaagtgatggtcaaatctggtcgc
agttacggcggagtaggcctgcccattgtatctttcggaggagagggtgatggggacggg
cagctgtgtcggccttggggaatctgtgtggataaggagggctacgtggtggtcgctgac
cgaagcaacaaccgcgtgcagatcttcaagccttgtggcactttccaccacaagtttggc
accttgggctctcgaccgggccagtttgaccgccctgctggagtcgcctgtgacagccaa
aggagaatcattgtggcagataaggacaatcatcgcatccagatctttacctttgatggc
cagtttcttctcaaatttggtgagaagggaacaaaaaatgggcaattcaactacccatgg
gatgtggccatcaactctgaaggaaagatcctggtttcagatacacgcaaccaccgcgtg
cagctctttggacctgatgggactttccttaacaaatatggattcgaaggtgccctctgg
aaacattttgactctcctcgcggcgtggccttcaatcgggaaggccaccttgttgtgacc
gacttcaacaatcatcggctgcttgtcatcaggcccgactgccagtcagcacgcttcctc
gggtctgaaggaaccggaaatggccagttcttgcggcctcaaggtgtagcggtggaccag
gaggatcgtattatcgtggctgattcccgcaaccatcgcattcaggtgttcgaacccaac
ggcaactttttatgcaagtttgggacacacggtaatggcttcgggcaaatggatcgcccc
tcgggtatagcggttaccccagatggaatgattgtggctgtggactttggaaacaaccga
atcctcatgttctga
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integrated database retrieval system
