Carassius auratus (goldfish): 113060105
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Entry
113060105 CDS
T07313
Name
(RefSeq) CCR4-NOT transcription complex subunit 10 isoform X1
KO
K12607
CCR4-NOT transcription complex subunit 10
Organism
caua
Carassius auratus (goldfish)
Pathway
caua03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
113060105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
caua03019
]
113060105
Messenger RNA biogenesis [BR:
caua03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
113060105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
ARM_TT21_N
TPR_14
TPR_12
TPR_8
TPR_7
ANAPC3
ARM_TT21
TPR_MalT
TetR_C_5
NTS_TR130
SCAF11-like_C
Motif
Other DBs
NCBI-GeneID:
113060105
NCBI-ProteinID:
XP_026084718
Ensembl:
ENSCARG00000015388
UniProt:
A0A6P6LJF2
LinkDB
All DBs
Position
41:complement(12803030..12828881)
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AA seq
746 aa
AA seq
DB search
MAETGSDQAGDMKHDSVSSPGISDHEREMATNAFEAFKAGSYDVSLKHLDNLQELNKEDY
KITMNKAITEFYKSGQTTTSTLKQTLMTLKNQMHTAVDDIDGLDDVENSILNYNQAVIYY
HMRQYSEAISIGEKLYQFLEPFEEKFAQAVCFLLVDLYLLTFQPEKALHLLAVLEKLTVK
DGNSKNGKGESTNSANKESSSLKAEFTAMIEAAKSKMHQYKVRAYIQMKSLKACKREIKS
VMNTSGNSAPSLFMKSNFEYLRGNYRKAVKLLNSSNIAEHPGPLKTGECMRCMFWNNLGC
IHFAMGKHNLGLFYFKKALQENDHVCAQLGDGSNGQAAKKFTGIPMCALLANKRYELLYN
CGIQLLHIGRPLAAFECLMEAVQVYHSNPRLWLRLAECCITANKGSSEQETKGLPSKKGI
VQAVVGQGYHRKIVLASQSTQNTIYSEGQSAAIPVASMEFAAICLRNALLLLPEHQQHDS
KPDKSSSQSGSTESSSETSDACSGKTQEGDKFIPAAPSSPLRKQEVENLRCSILACSAYV
ALALGDNLMALNHAEKLLHQTKLSGSLKFLGHLYAAEALISLDRISDAIAHLNPENVTDV
SLGVSSSEQEQGSDKGDLEPVESSGKQTPLCYPSSVSSARSTMLFNLGSAYCLRSEYEKA
RKCLHQAASMVNTKEIPPEAILLGVYLELQNGNTQLALQIIKRNQLLPSVKPTSSPDLRK
KPVPFQTSQPVQPIQTPSSFTQVQRK
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaacaggctcagatcaagctggtgacatgaaacatgacagcgtttcatctcct
gggatctccgatcatgagagagagatggcaaccaatgcttttgaggcgtttaaggctgga
agctatgacgtgtccctgaaacaccttgacaaccttcaggagcttaacaaagaggactac
aagattacaatgaataaagcgatcactgagttttataaaagtgggcagacaacaactagc
accctgaagcagacgttaatgaccttgaagaatcagatgcacacagctgtggacgatatt
gatggtttggatgatgtcgagaacagtattctcaactacaatcaagcagtgatttattac
cacatgcgacagtattcagaagctatatccattggggaaaagctctaccagtttcttgaa
ccttttgaagaaaagtttgctcaggctgtttgcttcttgttggtggatctatacctgctc
accttccagccagagaaggccctgcacctgttggctgtgctggagaagctcactgtgaag
gatggcaacagcaaaaatggcaaaggagagagcaccaacagcgcaaataaggagtcttct
tctctgaaagcagagttcacagccatgatcgaggcggctaaatcaaagatgcaccagtat
aaagtgcgtgcctatatccagatgaagtcactaaaggcctgtaaacgggaaatcaaatct
gtgatgaacacatctggaaattctgcgccctcactcttcatgaagagtaattttgagtat
ttgaggggaaattatcgtaaagctgtgaaactcctcaacagttcaaatatcgcagagcat
ccagggcccttgaaaacaggcgaatgcatgaggtgtatgttctggaataatcttggttgt
atccattttgccatggggaagcacaatctgggtcttttttactttaaaaaagcacttcaa
gaaaatgaccacgtatgcgcccagcttggtgatggcagtaatgggcaggcagctaagaag
ttcacaggcatccccatgtgtgctctgttagctaataagcgctatgagctgctgtataac
tgtgggattcagttacttcatatcggccgaccgctggcagcgtttgagtgtctgatggag
gcggtgcaggtgtatcactccaaccctcgactctggctcagactcgcagaatgctgcatc
acagctaataaagggagctcagagcaggaaacaaaaggtttacccagtaaaaaggggatt
gtgcaggctgttgttgggcaaggctaccatcgcaagattgttttagcatcacagtccaca
cagaacaccatctacagtgagggccagtcagcagctatcccagtggccagcatggagttt
gcagcaatctgtcttcgtaacgctttgctcctgctcccagagcaccaacagcacgacagc
aagcctgacaagagcagcagtcagtccggcagcacagaaagcagcagcgagaccagcgat
gcctgcagtgggaagactcaagagggagacaagttcattcctgctgccccctcgtcaccc
ctgagaaagcaggaggtggagaatctcaggtgctcaattctagcctgcagtgcatatgtg
gctcttgctcttggggacaacttaatggctctgaatcatgcagaaaaactcctgcatcaa
acgaaactgtcaggatcgctcaagttcctgggtcatctatatgctgctgaagccctgatc
tctttggacagaatctctgatgccattgcacatcttaacccggagaacgttactgatgtc
tcattaggtgtttcctccagcgaacaagagcagggttctgataaaggagatctggaacct
gtggagtcctcagggaagcagacgcccttatgttaccctagctccgtaagttctgcgcgg
tccacaatgctcttcaacctgggcagtgcgtattgcttgaggagtgagtacgagaaagcc
cgcaagtgcctccatcaggctgcttcaatggtgaacacgaaggagattcctccagaagcc
attttactgggcgtttacttagaactgcagaacggaaacacacagctggctctacagatc
atcaaacggaaccagctcctcccgtccgtcaagcccacctcctcccctgacctccgaaag
aaaccagttcccttccagacatcccagcctgtacagcccatacagaccccctcctccttt
acacaagtacagcgcaagtga
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