Carassius auratus (goldfish): 113060128
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Entry
113060128 CDS
T07313
Name
(RefSeq) nuclear receptor ROR-alpha-like isoform X1
KO
K08532
RAR-related orphan receptor alpha
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
caua03000
]
113060128
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
caua03310
]
113060128
Transcription factors [BR:
caua03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
113060128
Nuclear receptors [BR:
caua03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
113060128
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
CTNNB1_binding
Motif
Other DBs
NCBI-GeneID:
113060128
NCBI-ProteinID:
XP_026084761
Ensembl:
ENSCARG00000025810
UniProt:
A0A6P6LMQ2
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All DBs
Position
41:complement(13778574..13807449)
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AA seq
507 aa
AA seq
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MEDDEPASPDPNHDTTQSKRGNPVHKKSHLTQIEVIPCKICGDKSSGVHYGVITCEGCKG
FFRRSQSSSVQYSCSRQSNCPIDRASRNRCQSCRLKKCVAQGMSRDAVKFGRMSKRQRDS
LFAEVERHRQQQRLQANSVQEPQPLPAYRSSKEPREQSPHLIPPLPPAYPYSVEPDLQGC
PPEVHPYLECRIGEAQAQSLAYRSSHRRGDSNSLPAGRGFDSTGSTPEAILNMSGSEMGF
RPFDPESLFFSYQTSLHIEELSASIVRSHRETTQYRPEELQALRWKVFSREEIHAYQSKS
VDEMWQHCAVRLTDAVQYVVEFAKRIPGFRQLGQNDQIALLKSGSMEVVLVRMSRMFNTE
NNTVFFDGKFAGTELFKSLACGDLIAALFEFAHNLCALRLTEQQMAVFTALVLLNADRPC
LEDRERVQRVRRDVELALSHILHRDNQESLLHKLYQRVPVLKSLCALHIEKLRWFRQLYP
LTVHSHFPPLYKELFGSDSDILTLTTH
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atggaagatgatgagcccgcatcgccggacccgaaccacgacacgactcagagtaaaaga
ggaaatccagtgcataagaaatcccatctaactcagattgaggtgatcccatgcaagatc
tgtggagataagtcatcaggggttcattatggagtcatcacttgtgagggctgcaagggc
ttcttccgcagaagtcagtcctccagcgtgcagtactcgtgctccagacagagcaactgc
cccattgaccgcgccagccgcaaccgctgccagagctgccgcctcaaaaaatgtgtcgct
caaggaatgagccgcgacgcggtgaagtttggtcgtatgtcaaagcgccagagagactct
ctgtttgcagaagtcgagagacatcggcagcaacagcgtcttcaggccaactcagtccaa
gagccccagcctctcccagcctaccgatccagcaaagagcccagagaacagtcaccacat
ctcataccacctctacctccagcttacccttactctgtagagcctgacctgcaaggctgc
cccccagaggtgcatccatacctggagtgtcgcataggcgaggcccaggctcagagtctg
gcctacaggagctcccacagaagaggggacagcaacagcttgccagctgggagaggattt
gactccactgggtctacaccagaggctattctgaacatgagcggcagtgaaatgggcttt
cgtccttttgaccccgagagcttgttcttttcttaccagacgtctctccacatagaggag
ctctctgcaagtatcgtacgttcgcacagagagacgactcagtatcggccggaagagctc
caggctctcagatggaaggtttttagcagagaggagatccacgcttaccagagcaaatcg
gtggatgagatgtggcagcactgtgcggtgcggctgaccgatgctgttcagtacgtggtg
gagtttgctaaacgcatcccaggattccgtcagcttggtcagaacgatcagattgctctc
ctcaagagtgggtccatggaagtggttctggttcggatgagtcggatgtttaacacagaa
aacaacacagtattctttgacggcaaatttgcaggaacagaacttttcaaatccctcgca
tgcggtgatctaatagcggctctatttgagtttgctcacaatctgtgtgcgctgagactg
actgaacagcagatggccgtgttcactgcactggtcctcctcaatgcagatcgaccgtgc
ctggaagacagagaacgagtgcagagagtcagaagagatgtggagcttgcccttagtcac
attctgcacagagacaatcaagagagtctactgcataagctgtatcaaagagtcccagtg
ctgaagtctctgtgtgcgctgcatattgagaaactgcgatggttccggcagctttaccct
ctcacagtgcattcccacttccctccgctatacaaagagctgtttggctctgactcagat
atactgacactgactactcactga
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