Carassius auratus (goldfish): 113060148
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Entry
113060148 CDS
T07313
Name
(RefSeq) probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase isoform X1
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
caua03009
]
113060148
Enzymes [BR:
caua01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
113060148
Ribosome biogenesis [BR:
caua03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
113060148
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
Methyltr_RsmF_N
TRM5-TYW2_MTfase
Methyltransf_31
PCMT
FtsJ
Motif
Other DBs
NCBI-GeneID:
113060148
NCBI-ProteinID:
XP_026084798
Ensembl:
ENSCARG00000026645
UniProt:
A0A6P6LJQ7
LinkDB
All DBs
Position
41:14066461..14074272
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AA seq
730 aa
AA seq
DB search
MGRKLDPTIKVKRGPGRKARKQKGAETELSKFLVDDDGPKKLSSRSRKRAVKRAQVTKEP
KQEEKPKKGFTDENSKWLKPAPRKRKIEQSEEDEDSDSQWEEDDDEEGFDKKEMEEEEEE
DDDDMVDDYGADEGDEQDSDGEELLPIERAARKQKKQTSKKPESDDDDDDDDDDDEEKDD
LKEDGEEEEDTVQANIDETEQFKLPAAAERAKEGLLAMDLQTIHQRIRDNVDVLSHFSEK
REEGKERSEYLSLLRSDLCTYYSYNEFLISKLMDLFPVSELIDFLEANEIQRPVTIRTNT
LKTRRRDLAQALINRGVNLDPLGKWSKVGLVIYDSSVPIGATPEYLSGQYMLQGASSFLP
VMALSPQEGESVLDMSAAPGGKTTYMAQLMRNTGMIVANDANADRLKSVVGNIHRLGVTN
AVICNYDGRQFPKVMGGFDRVLLDAPCSGTGVISKDPGVKTGKDEADILRSAHLQKELIL
SAIDSVNADSPTGGYLVYCTCSIMVEENEWVVDYALKKRNVKLVPTGLDFGKEGFIRFKE
RRFHPSLKLSRRFYPHSQNMDGFFVAKLKKLSNAIPSAPREREDEEESSKTETAASSEQI
QNPESKQQKPNSTPEKSNMGQKQKLKPKKSETPIITKKTGVKAENKKPDGAKKAKIAKLD
GETSKKNEKPDKMQKVKELNGDSTKEVVMEKKEGSQFEKKNEMKRKNLLKNNTNRMGKNK
FRKLKSMVGQ
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgggcaggaagctggaccccaccatcaaggtgaagagaggacctggacgcaaggccaga
aaacagaagggagcagaaactgagctgtccaagtttttagttgatgatgatgggccaaaa
aaactttcaagcagatcaagaaaacgagctgtaaaaagagctcaagtgactaaagaaccc
aaacaagaggaaaagcctaaaaaaggattcacagatgagaatagtaaatggctaaaacca
gcgccgaggaagcgaaagattgaacaatctgaagaagatgaggacagtgacagccaatgg
gaagaagatgatgatgaagagggctttgataaaaaggaaatggaggaggaggaggaggag
gatgatgatgatatggttgatgactatggtgctgatgaaggggatgaacaagacagtgat
ggagaagagcttctgccaattgagagagctgcaagaaaacagaaaaaacagaccagcaag
aaaccagagagtgacgatgatgatgatgacgatgatgatgatgatgaagaaaaggatgat
ttaaaggaagatggggaggaggaagaggatactgtacaggcaaatattgatgaaaccgaa
caattcaaactcccagctgcagcggagcgagcgaaggagggtcttttagcaatggaccta
cagaccatccatcagaggatcagagataatgtggatgtgctgtctcacttcagtgagaag
agagaagagggtaaagagagatcggagtatctctctctgctgcgctctgacctctgcacc
tactacagctacaacgagttcctcatcagcaaactcatggaccttttccctgtctctgag
ctgattgattttcttgaggccaatgaaatccagaggccagtcaccatcagaaccaacacc
ctgaagaccaggaggagagacttggctcaggctctgattaacagaggagtgaacctggat
ccattggggaaatggtccaaagtggggctggttatctatgactcttctgttcccattgga
gcaactccagaatatttgtcaggccagtacatgttacaaggtgcatcatcatttctgcct
gtaatggcgctttctccccaggagggggaatcggtgctggacatgagcgccgctcctgga
ggaaagaccacttatatggctcagctcatgaggaacacgggcatgattgtggctaatgac
gcaaatgcagacagactgaagagcgtggtgggaaacatccatcgtctcggtgtcactaac
gctgtcatctgcaactatgacggcagacagttccccaaggtgatgggaggtttcgaccga
gtgcttttagatgctccttgttcggggacaggagtgatctccaaagatccaggagtaaaa
actggcaaagacgaggctgatattcttcgctcggctcacctgcagaaggagctcatcctg
tctgctattgactccgtcaatgctgattctccaactggtggataccttgtttactgcaca
tgctctattatggtagaggagaacgagtgggtggtggactatgctttaaagaagagaaat
gtaaagcttgtccccactggactagactttggcaaggagggattcatcagattcaaagaa
agacgtttccatccatctctcaaactgtctcgccgattctatcctcactcccaaaacatg
gatggattttttgtggccaagctaaagaagctgtctaacgccatccccagcgcaccgaga
gaaagagaagatgaagaagaatcttcaaaaacggagaccgcagcctcgtccgagcagatc
cagaatccagagtctaagcaacagaagcccaattcaacgccagagaaaagcaacatgggc
cagaagcagaaattaaaaccgaaaaaatctgagacgcccatcatcacaaagaaaactgga
gtgaaagctgagaataaaaaacccgatggtgccaaaaaggccaaaattgctaagttggat
ggtgaaacatccaaaaagaatgagaaacctgacaaaatgcagaaggtaaaggaactgaat
ggagattcaacaaaagaggtggtgatggagaagaaagaggggagccagtttgagaagaag
aacgaaatgaaaagaaagaacttgttgaagaacaatacaaacagaatggggaaaaacaag
tttaggaagttaaaaagtatggttggacagtga
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