Carassius auratus (goldfish): 113060663
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Entry
113060663 CDS
T07313
Name
(RefSeq) homeobox-containing protein 1-like
KO
K24885
homeobox-containing protein 1
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
caua03000
]
113060663
Transcription factors [BR:
caua03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
113060663
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HNF-1_N
Homeodomain
Homeobox_KN
HTH_3
AbiJ_NTD3
DUF494
CUT
HTH_31
HTH_37
HTH_24
HTH_26
NOC3p
Motif
Other DBs
NCBI-GeneID:
113060663
NCBI-ProteinID:
XP_026085559
Ensembl:
ENSCARG00000069062
UniProt:
A0A6P6LM11
LinkDB
All DBs
Position
42:11983188..11996998
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AA seq
444 aa
AA seq
DB search
MSHYTDEPRFTIEQIDLLQRLRRSGMTKQEILNALDTLDRLDREHVEKFGHRHAHGGNGA
AAINHGNTTTSSNSCTTSSNNLTASSSTTSTATQTGYRGNGLSPSPSNIYDTSPPPTVPT
PVPVVAPMVQNGRDSLASMPNGKLSPPRFAISNTSSRAFAFEHPDEDVDIDDKVEELMRM
DSAIIKEEIKAFLGNRRISQAVVAQVTGISQSRISHWLLQQGSDLSEQKKRAFYRWYQLE
KTTPGATLAMRPTPMALEDIVEWRQTPPPISSTQGSFRLRRGSRFTWRKECLAVMESYFN
DNQYPDEAKREEIANACNAVIQKPGKKLSDLERVTSLKVYNWFANRRKEIKRRANIEAAI
LESHGIDVQSPGGHSNSDEIDGNDYGEPVAADHVLGMDDNTGPNEHQDPIALAVEMAAVN
HSILALARQGGATSDIKTEVLDDE
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgtcccattacacagatgagcctcgttttaccattgagcagatcgacttgctgcagcgg
ctacgtcggagcggcatgacaaagcaagagatcttgaacgcgctggacaccctcgaccgg
ctggaccgcgagcacgtggagaagttcggccaccggcacgcccacggcggaaatggggca
gccgccatcaatcacggcaacaccaccacctcttcaaactcctgcactacctcctctaac
aacctcacagcctcttcttcaacgacatctacagccacgcagacggggtaccgtggcaat
ggcctctctccatcccctagcaacatctatgacacctccccgcccccgactgtccccacc
cccgtgccagtagtagcacccatggtccaaaatggacgggacagccttgcctctatgccc
aatggtaagctgtccccgccccgcttcgccattagcaacacctcctcgcgggccttcgct
ttcgagcacccagatgaggacgtggacatcgatgataaagtcgaggagctcatgagaatg
gacagtgctataattaaagaagagattaaagccttcttggggaaccggcgaatatcacag
gcagtagttgcccaagttacaggtatcagtcagagccggatctctcattggctgctccag
cagggctcagacctcagcgagcagaagaaaagagctttctaccgctggtaccaactagag
aaaactacacctggtgcaactctagcgatgcggcccaccccgatggccctggaggacatt
gtggagtggcgtcaaacccctccccccattagcagcacccagggcagcttccgtctgcgg
cgtggcagccgcttcacctggaggaaagagtgtctggcggtgatggagagttatttcaat
gacaaccagtaccccgatgaagccaaacgagaggaaattgccaacgcctgcaatgcagtt
attcagaaaccagggaagaagctttcagatcttgagagggtcacgtctctgaaagtttac
aactggtttgccaacagacggaaggaaattaagagaagagccaacatagaagcagcaatc
ctggagagtcatgggattgatgtccaaagcccgggaggtcattccaacagtgatgagatc
gatggaaatgactacggtgagccagtagctgctgaccatgttttgggaatggatgataac
acaggcccaaatgaacaccaggaccccatagctttggcagtggagatggccgctgtcaat
cacagcatcctggcactggcgaggcagggcggagccaccagtgacatcaaaacagaggtg
ctggacgacgagtga
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