Carassius auratus (goldfish): 113060748
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Entry
113060748 CDS
T07313
Name
(RefSeq) protein Smaug homolog 1-like isoform X1
KO
K27396
protein Smaug
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
caua03019
]
113060748
Messenger RNA biogenesis [BR:
caua03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
113060748
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
PHAT
SAM_2
SAM_3
Motif
Other DBs
NCBI-GeneID:
113060748
NCBI-ProteinID:
XP_026085697
Ensembl:
ENSCARG00000063956
UniProt:
A0A6P6LPP5
LinkDB
All DBs
Position
42:complement(13822983..13857236)
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AA seq
679 aa
AA seq
DB search
MMFRDQVGVLAGWFKGWNECEQTVALLSLLKRVSRTQARFLQLCLEHSLADCTELHVLER
EANNPVLISQWQSESKERVISLVLTHLPLLKPGNVEAKVEYMSLLPKILGHTIELGRHLE
ESRQLLSYALIHPATSLEDRGNLALWLNHLEERAAARGAGDSLERAPSSHHGQPPHLYPH
HQRYGSDDRLNGWQGSRDSGLGSWQQQQQGCENGHLSLYPSSSVPSTINAVGTGSGTNTI
LSGGQHSPLRRSVSLTPPMSGGSNQPLGHEWLSQEDLRPRGPAPDHAPISPQSSVASSGS
GGSEHLEEHAAVRSTFHEEGSGMRDVPSWLKSLRLHKYAGLFSTLTYDEMMSLTEQQLEA
QQVTKGARHKIIISIQKLKDRQNMLRCLEKDILEGGNLRAPLQELHQIIQTPIKACSTEE
SSQRHLLSAEGKSSIATSHLGGGEAEGSSTVITEGDIPAQFTRVMGKVCTQLLVSGSDEE
NISSYLQLIDKCLIHEAFTETQKKRLLSWKQQVQVQFRSISRKTLLDLTGQRRSSRYGQS
NSLPTTGCVGSNVPTRRNLRQYQMRSLPGVRPILLGTTGLFGPTPRSSSSTPTGLKQGRQ
GLWFANPGGSNSMPSRTHSSVQRTRSLPVHTNPHTMAMFQQTDLQVPVTEPDINNRLESL
CLSMTEHALGDGVDRTSTI
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgatgtttcgtgaccaggtgggagtcctcgccggctggtttaagggatggaacgagtgc
gaacagacggtggcgttattgtcgctcctcaagcgggtcagtcggacccaagcacgattc
cttcagctctgtctggagcattccttggctgactgcaccgagctgcatgttctggaaagg
gaggccaataatccagtgttgatcagtcagtggcagagtgagtcgaaagaacgggtcatc
tctctggttctgactcacctgcctctgcttaaaccaggcaacgtcgaggccaaagtggag
tacatgagtcttctgccgaagatcttgggccacaccatcgaacttggccggcacttagaa
gaaagcaggcagcttctgtcctacgccctaatccaccccgcaacctccctcgaggaccgc
gggaacctcgccctctggctcaaccatctggaggagcgggcggctgcccgaggagccgga
gattcccttgagcgtgcaccttcatctcatcacgggcagcctccacacctctatccccac
caccaacgctatgggtcggatgaccgtctcaacggttggcagggctcgagggactctggg
ctgggaagttggcagcagcagcaacagggctgcgaaaacgggcacctctcactgtaccca
tcatcttccgtgccctctactatcaacgctgtaggtacaggcagtgggaccaacacaatc
ctgtcgggtgggcagcacagtcctctgaggcgttcagtgtctctgacccctccgatgagt
ggcggatctaaccagcctctggggcacgaatggctgtcccaggaggacctgcgtccccgc
gggccggcccccgaccacgcccccatctctcctcagagcagcgtggcgtcctcgggcagc
ggaggcagcgagcacctggaggaacacgctgctgtccgaagtacattccatgaggagggc
agcgggatgagggatgtgccgtcatggctgaagagtctccgtctccataagtacgctggg
ctcttctccaccttgacctatgatgagatgatgtcactgacggagcagcagttggaagct
cagcaagtcaccaaaggagcacggcacaagatcatcatcagtattcagaagctgaaagac
agacaaaacatgctacgctgtttggagaaggatattttggagggagggaatctacgtgct
cctttgcaggagctccaccagatcatccagacacccattaaagcctgcagcacagaggag
tcttcacagcgccacctgctgagcgctgaggggaagagcagcatcgccacttcccacctg
ggcggaggagaggcggagggcagctccacagtcataactgagggagacatccccgctcag
ttcactcgcgtcatgggcaaagtttgcacacagctccttgtctccgggtcagatgaggag
aacattagttcctacctacagcttattgataagtgccttatccatgaggccttcacagag
acacagaagaagaggttgttgtcatggaaacagcaggtgcaggtacagttccggtcgatt
tcgaggaaaactctccttgacctaacaggacagagaagaagcagtcgttacggtcagtct
aactcccttccaaccacgggctgcgtaggcagcaacgttcccacccggagaaacctgcgg
cagtatcagatgcggagtttgcctggtgtaagacccatccttttgggtaccaccggcctg
ttcggaccaaccccccgaagcagtagcagcactcctaccggcctgaagcagggaagacag
ggtttgtggtttgccaatccagggggcagtaacagcatgcccagccgtacccacagctca
gttcagaggacccgatcgctacccgtccacaccaacccacacaccatggctatgttccag
caaacagatttacaggtgcctgtgactgagcctgacatcaataaccgtttggagtctctg
tgtctcagcatgactgaacacgctctgggagatggcgttgatcgaacttcaactatctga
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