Carassius auratus (goldfish): 113060907
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Entry
113060907 CDS
T07313
Name
(RefSeq) tonsoku-like protein isoform X1
KO
K09257
NF-kappa-B inhibitor-like protein 2
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
caua03000
]
113060907
03400 DNA repair and recombination proteins [BR:
caua03400
]
113060907
Transcription factors [BR:
caua03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Ankyrin only
113060907
DNA repair and recombination proteins [BR:
caua03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
113060907
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
Ank
Ank_2
TPR_8
Ank_4
Ank_5
TPR_2
TPR_1
Ank_3
LRR_6
TPR_7
TPR_10
RPN7
LRR_4
TPR_MalT
ANAPC3
DUF2225
Ank_KRIT1
Motif
Other DBs
NCBI-GeneID:
113060907
NCBI-ProteinID:
XP_026085952
Ensembl:
ENSCARG00000049958
UniProt:
A0A6P6LQD6
LinkDB
All DBs
Position
42:17463778..17485343
Genome browser
AA seq
1428 aa
AA seq
DB search
MMTSTKEIKQLQKAKSKAQSSNNLKEEANLCNQLGEVYAKTGDYRSAIEEHRQELELSEI
LHDVIGSAVANRKIGECYAELGNIEAALKHQRLHLNLARSVHDAAEEQRALATIGRTYLF
LFDSDNSRDSLKHAEDAFKKSLAIVDERLEGTVSSRELSEMKARLLLNLGCVYDGMKEPQ
RCSDFIRQSIYIAEKNHLLEDLYRANFNLGSIHFRNGQHSRAMRCFEQSKECARKMKDKF
SESECFHSIGKILLHLGDFAAARRSLKKAFCLGSQQPSDREAVKRDFKHAIRGCQLEQTA
TEVTDKFSHEAMDLSEQLGDLYCKVGCYNKALEAYQAQLVCAEVLGKPARELAVIHVSLA
ATYTDLRQHHRAVEQYRQELKLRVGNPKEECLTWLNIAGCEEETGQPMETLDQSFSAALS
CAERSGLNKLQRRVLRGWLQAQRRCGSSQCDDTEARLMELCERDGLRLEDSEEEDEEEEV
ENSEPLEDSDIEYSDSDEDLEGYDKTVTGRRRTQRWNRRNEKGETLLHRACIEGNLKQVQ
YLLDQGHPVNLRDYCGWTALHEACNYGHQEIVALLLDRGANINDPGGRDCEGVTPLHDTL
NCGHFSVARLLVERGASVTVRNGKGHTPLDTLRQWFKTYSRQLDQETKQECLETEKLIKR
ALSGDVSVVSARPRQQKELQDSQLFDAEYSEPLLQESLPSRQQITPCPAPTVPTPKNSAP
GHRSTSGPARRPRGMEVDVLYGNESSSSDHSDVDCSFSPLRPVRSRPRSPAVQSSQELPP
SQDVPSVYEFREAVLPAQSESGRLEYQKAMQNLGSAKSRLFSQSLSEPAFTSTPAVSANS
RTALVPEDQYLADDWLEDDLRDVQPKKRRRVSEHNVPREITSRNQNHFSVSAEVTPRAVQ
SSSSRGLSLKKGPNKPRQVKMNQMPGMVNLGRREVSRSQSPIMTHESEPIHDHAPPTHQT
MAPAPFQNRTAHVPAPIRMRVRVQDNVFLIPVPHSEADSCTVAWLCDQAAQRYYQTCGLL
PRLSLQKEGALLLPTDPLLAVLHTNEEVVAEVCSWDLPPLPERYRKACQSLAVEENRRVS
RLCEVQDSSSCVNVCGLSLPPASLTPLLRALKLQASLTELHLSANRLNNDLLPELMSAAA
TMPRLRILDISANQITGEGLRKASDTFETRSQAAFPCLEELILSMNPLGDGWTQALVSLL
SNCPMLSVLSLQACGLSARFLQQHRLLLANALASTGNMRSVCLSHNALGSTGFELVLKTL
PMHCLTHLQLSAVCRGPSDQPAMEILTKLLTQGDCPLTHLNLSGNGLTDHSVLLLARCLP
VCPSLVSLDLSGNPSVTSVGLQSLLNSLMEAQRPLNHLNLQGCQVSGPLGDVCLDSLSDH
IRDLRLCSQRLNKLDQDALQQTWRRRSEHVHVFSRNSKCMLSITATSQ
NT seq
4287 nt
NT seq
+upstream
nt +downstream
nt
atgatgacgtctacaaaagagatcaagcaactacagaaggccaagagtaaagctcaaagc
agcaataacctgaaagaagaagccaatctttgcaatcagctcggggaggtttacgctaaa
acaggcgactatcgctctgctattgaagagcatcgtcaggaattggagctgtctgagatt
ctgcatgatgtgattggctccgctgtggccaatagaaagattggagaatgctatgcagaa
ctggggaacatcgaagctgctctgaagcaccagaggcttcatctgaatctggctcgatct
gtccatgatgcggcagaggagcagagggcactggccactattggacgaacatacctcttc
ctctttgattcagataattcacgggacagcttgaagcatgctgaagatgctttcaagaag
agtttagccattgtagatgagcggctggaaggtaccgtatcttcacgagagctgagtgag
atgaaagcccgtctcctgctgaatctgggctgtgtgtatgatggaatgaaggaaccgcag
cgatgcagtgacttcatacgacagagcatctacattgctgagaaaaaccaccttctagag
gatctgtatcgtgccaactttaacctgggcagcattcacttccgcaacgggcaacactcg
cgcgccatgcgctgtttcgagcagtcgaaagaatgcgcccgcaaaatgaaagacaagttc
agtgagagcgagtgcttccatagcatcggcaagatattgcttcatcttggtgactttgcg
gcggctcggcgttctctgaagaaagccttctgtctgggatcccagcagccgtctgatcgt
gaggccgtcaagagagatttcaaacatgcgattcggggctgtcagctggagcagacggcg
accgaagtgaccgataagttttcccatgaggccatggatctgtcagagcagctgggagat
ctttactgtaaagtgggctgctataacaaagctctggaagcttatcaagcacaactggtg
tgtgccgaggttttaggaaagcctgctcgtgagttagccgtcattcatgtgtcgctggcg
gccacgtacacagatttgcgacaacatcacagggccgtggaacagtacagacaagaacta
aagctgagagtgggcaaccctaaagaggagtgtttgacgtggttgaacatagctggttgt
gaggaagagaccgggcagccaatggagacgctcgatcagagtttcagcgctgctctgagc
tgtgctgagagatcaggactaaacaaactacagaggcgtgttttgagaggctggctgcag
gcccagcggcgctgtggctcctcacagtgtgacgacaccgaagcacggctgatggaactg
tgtgagcgcgatggactgagactggaggacagtgaggaggaggatgaggaagaggaggtg
gagaacagtgaaccactggaagacagtgacatagagtactctgactctgatgaggatctg
gagggttatgataagaccgtgacgggcaggaggaggactcagaggtggaaccgacggaat
gagaagggcgagacgcttctgcacagggcctgtatagagggaaacctgaagcaggttcag
tacttgcttgaccagggtcacccagttaacctgagagattactgcgggtggactgctctg
catgaagcctgtaactacggtcatcaagagattgtagctttactgctggaccgtggagca
aatataaacgaccctggaggtcgagactgtgagggtgtcacacccctgcatgacacccta
aactgtggccacttcagtgttgcacgactgctggtagagagaggagcatcggtcactgtt
cgcaatggcaagggccacactcctctggacaccctccgtcagtggtttaagacttacagc
cgacagctggaccaagagacaaaacaggagtgtttggagaccgaaaaactcatcaagaga
gctctttcaggagacgtctcagttgtgtcagcgcgtccgcggcagcagaaggagcttcag
gacagtcagctgtttgatgctgagtattcagagccgctgctgcaggagtcactgccctca
cgccagcagatcactccctgtcccgctccaaccgtcccaactccaaaaaactctgctccg
ggacacaggagcacctcaggcccagcccgccggccacgaggaatggaagtagatgttttg
tatgggaacgagagcagttcttcggatcattccgacgtggattgctcattcagtcctctt
cgtcccgttcggtcaagaccacgttccccagctgtccagtcctcgcaggaactcccaccc
agtcaggatgtaccctctgtatatgagttcagagaggccgtgttgcccgcacagtcagag
tcgggcagactggagtatcagaaggccatgcagaatctgggcagtgccaaatctcgcctc
ttttctcagagcctatcagagccggcctttaccagcacgccagcagtgtcagccaatagc
agaacagcactggtaccagaggaccagtatctggcagatgattggctggaggatgacctg
agggatgtgcaacccaagaagagacggagagtttctgagcacaacgtcccacgtgaaata
acttccagaaatcaaaatcatttctcagtttcagctgaagttactcctagagcagttcag
agttcctccagtagggggctgtctctgaaaaagggccctaataagccacggcaggtgaag
atgaatcaaatgcctgggatggtgaatctaggcaggagggaggtcagcaggtcacagagt
ccaatcatgacccacgaatctgagcccatccatgaccatgcaccccctacccatcagacg
atggcgccagcaccattccagaaccgaacagctcatgttcctgcaccgatcaggatgagg
gtcagagttcaggacaatgtcttcttgattcccgttcctcacagtgaggcagactcgtgt
acggtggcgtggttgtgtgatcaggctgctcagcgttactatcagacgtgtggattactg
ccgcgtctgtccctgcagaaagagggcgctctgctcttacccaccgatccactgctggct
gtgctgcacaccaatgaagaggttgtggctgaggtgtgttcatgggatcttcctcctctc
ccggagcgctacaggaaagcctgtcagagtctggcagtggaggagaaccggcgtgtgtct
cggctgtgtgaagtgcaggacagcagctcctgtgtgaacgtctgtggactcagtttgcct
ccagcgtctctgactcctctcctccgagccctcaaactgcaggccagcctcacagagctg
cacctctctgccaatcgtctgaacaacgacctgcttccggagctgatgtccgctgctgcc
actatgcccagactgaggattttagacatatcagccaatcagatcactggagaggggctc
agaaaagcctcggacacgtttgaaacgagaagtcaagctgctttcccttgtctagaggag
ttgattttaagcatgaatcctctgggtgatggctggacacaggcactagtgagtcttctg
tccaactgtcccatgctttccgttctgtccctgcaagcctgcggcctctctgcacgattc
ctccagcaacaccgtctgctcttagccaacgctttggccagcactgggaatatgcggtcg
gtgtgtctctcccataatgcactgggctccactggtttcgagcttgtgttgaagacatta
ccgatgcactgtctcacacaccttcagctgtctgcagtctgtagaggtccatctgaccag
cctgccatggagatcctcactaaactcctgacacaaggtgactgtccactcacacactta
aatctgtctggaaatggccttacggaccacagtgtcctcttgcttgctaggtgtcttcct
gtctgtccctccctggtgtctttggacttgtctggcaacccttcagtgacctcagtcggc
cttcagagtcttcttaactccctcatggaggcccagcgacctttgaaccatctcaatctt
caaggctgtcaggtgtcaggacctctgggtgatgtttgtttagacagtctgtctgatcac
atccgagatctgcgtttgtgctcccagagactcaataaactagaccaggatgcactgcag
cagacctggagacggagatcagaacacgtgcatgtcttttctcgcaactccaaatgcatg
ctgagcatcacggcgacttcacaataa
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integrated database retrieval system
