Carassius auratus (goldfish): 113060912
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Entry
113060912 CDS
T07313
Name
(RefSeq) neuronal PAS domain-containing protein 3-like isoform X1
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
caua03000
]
113060912
Transcription factors [BR:
caua03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
113060912
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_3
bHLH_HIF1A
PAS
PAS_11
PAS_9
PAS_4
HLH
Motif
Other DBs
NCBI-GeneID:
113060912
NCBI-ProteinID:
XP_026085963
UniProt:
A0A6P6LN39
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All DBs
Position
42:17129449..17913339
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AA seq
980 aa
AA seq
DB search
MIRIFPDFSVQVTAAAAAGAGAGGGMPAASRVPGATNGNPQNLQGLTSYQQSEPYWERSA
NASSCSATRPKTLHLGGQQHTSSPWLQALRKEKSRDAARSRRGKENFEFYELAKMLPLPG
AITSQLDKASIIRLTISYLKMRDFANQGDPPWNLRIEGPPPNTSVKAIGSQRRRSPSTAA
AEIFEPHLGSHILQSLDGFVFALNKEGRFLYISETVSIYLGLSQVELTGSSVFDYVHPGD
HVEMAEQLGMKLPPGRGLLSQGGGAEDGASSASSSSHSETPEPVESNSPSLLSPDNILER
SFFVRMKSTLTKRGVHIKSSGYKVIHITGRLRIRMALTHSRSVPNQIMGMVVMAHALPPP
TINEVRIDCQMFVTRVNMDLNIVYCENRISDYMDLTPVDIVGKRCYHFIHAEDVEGIRQS
HLDLMNKGQCVTKYYRWIQKNGGYIWIQSSATIAINAKNGNEKNIIWVNYVLSNPEYKDT
PMDIAQLPNLPEKASESSETSDSESDSKENSEDNENFKSDGKGNQSSENSEDPESNSKKQ
MGQPPEQEMRRQEEGDSSSNPESQDSDDSLEPSDCETDNKEGRLGGLHIKVECYGDGEVE
DLQDSPSSCSSYSEEEVEDEVEDIVKDCNSGGELRGPAMSKHQKRKKRRKKQKWDGSRQR
LRLSPSAAATPSPGSLDPTLGDQPPLLLPPSPTNSSVLKIKTEMSEPINFDNDSSIWNYP
PNREISCNESPYSMTKTHNTFPSPPPAGLQVSIPDSVLTPPGAEGGGGSRKPNFNGNSSN
GNNNSAPTSVSSATPGSLVPPSSSTTADPLSPPLSASPRDKQQGTPTSSGSLLYTSDLEA
LQRLQAGNVVLPLVHRVTGTLAATSTASPRVYTTGTIRYAPADVSLAMQGNILPNAHSAV
NFVDGPGFGIDPKTPMEMLYHHVHRLNMSTPFGGAVSGAGLTQMPAANVFTTAEGLFSTL
PFPVYSNGIHNTQTLERKED
NT seq
2943 nt
NT seq
+upstream
nt +downstream
nt
atgatcaggatcttcccggatttcagtgttcaggtgacggcggcggcggctgcaggtgcg
ggagccggtggaggaatgccggctgcgtcaagagtcccgggagctactaacggaaacccg
caaaacctccaaggcttgacgtcttaccaacaaagcgagccatactgggaaaggtctgct
aatgcaagctcctgctccgccactaggcccaagacactccaccttggagggcaacaacat
acctcatcaccatggttgcaggctctgagaaaggaaaagtcacgtgacgccgctcgctcg
cgccgggggaaggagaactttgagttctatgagctggcaaagatgcttccgctccccggt
gccatcaccagccagctggacaaggcctccatcatccgcctcaccatcagctaccttaag
atgagggacttcgccaaccagggggacccgccgtggaacctgcgcatcgaaggaccgccg
cccaacacctcagtcaaagctatcggctcccagaggaggcggagccccagcaccgctgcc
gcagagatctttgagcctcacctcggcagccacatcctgcagtccctggatggatttgta
tttgcactaaacaaggaggggaggtttttgtacatctcagagacagtgtcgatatacctg
gggctttcacaggtagagctgacgggcagcagtgtgtttgactatgttcatccgggcgat
catgtggagatggccgagcagctgggcatgaagcttccaccgggcagagggctgctgtct
cagggtggcggggccgaggacggagccagctctgcctcttcttcctctcactctgagaca
cctgagccagtggagtcgaacagccctagtcttctgtcgccggataacattctagaacgc
tccttcttcgtccgtatgaagtccacgctcaccaaaagaggcgtccacatcaagtcctct
ggatacaaggttatccacattaccggcaggctgcggataagaatggcattaacacacagt
cgttcagtacccaatcaaatcatgggcatggttgtgatggcacacgcacttcctccgcca
accatcaatgaggttcggatcgactgccagatgtttgttacacgggtcaacatggatctc
aacatcgtctactgtgaaaaccgaatcagtgactacatggacctgacacctgtcgacatc
gtagggaagagatgctatcacttcattcacgcagaggacgtggaaggcattcggcaaagc
catttagacctaatgaataaaggtcagtgtgtgacaaagtattaccgctggattcagaag
aatggaggttatatctggatccagtccagtgccactattgcaatcaacgccaagaatggc
aatgaaaaaaacatcatctgggtcaactatgtactcagtaatccagagtacaaagataca
cccatggatatcgcacagctgcctaacctgccagagaaagcatcagagtcctcagaaaca
tctgattctgaatccgactccaaggagaactctgaagacaatgaaaacttcaagtcagat
ggaaaagggaatcagtcttctgagaacagtgaagatccagagtcgaacagtaagaaacag
atgggccagccaccagagcaagagatgagacgacaggaggaaggagacagttccagcaat
ccagaaagtcaggacagtgatgatagtcttgaaccttctgactgtgaaactgacaacaag
gagggccgcctgggtggtttacacataaaggtggagtgttatggtgatggtgaggtggag
gatctacaggactcgccctcctcttgctcctcctactcagaagaagaagtagaggatgag
gtggaggatattgtgaaggactgcaacagtggaggagagctgagaggaccagcaatgagt
aaacaccagaagagaaagaagaggagaaaaaagcagaaatgggatggaagtcgacaacgt
ctccgtctgtctccctcggcggctgctacccccagccctggcagcctggaccccaccctt
ggagaccagcctcccctcctgcttccaccctccccaaccaactcctctgtgctgaagatc
aagactgagatgtcagaacctataaactttgacaacgacagcagcatctggaactaccca
cccaaccgagagatctcctgcaacgagtctccctacagcatgacaaaaacccacaacacc
ttcccttctcccccacctgccggcctccaggtgtccatcccggactctgtcctcactcca
cctggtgccgagggtggaggaggcagcagaaagcccaacttcaatggcaacagtagcaac
ggcaacaataacagtgcccccacctctgtgtccagtgcaactccgggcagcttggttcct
ccttccagttccactactgctgacccgctctccccacctctgtcagcctcgccacgggac
aagcagcagggtacacccacctcctctggttccctgctctacaccagtgacctggaagcc
ctgcagaggttacaagcggggaacgtggtacttccattggtgcacagagtcacaggcacg
cttgctgccaccagcacagcatccccgcgagtctacaccactggaacgatccgatatgcc
ccagcagacgtcagcctggccatgcagggcaacatcttgcctaatgctcacagcgctgtg
aacttcgtggatgggcccggcttcggcatagaccctaagacgcccatggagatgctgtac
catcatgtgcaccggctcaacatgtccacccccttcgggggtgcggtcagcggagccggg
ctcacacagatgccagctgctaatgtcttcaccacagcagagggacttttctccacgctt
ccgtttcccgtctacagcaatggcatccacaacacacagactctggagcgcaaggaggat
tga
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